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1.

rs1491529409 [Homo sapiens]
    Variant type:
    DEL
    Alleles:
    CG>- [Show Flanks]
    Chromosome:
    X:78321136 (GRCh38)
    X:77576633 (GRCh37)
    Canonical SPDI:
    NC_000023.11:78321135:CG:
    Gene:
    CYSLTR1 (Varview)
    Functional Consequence:
    intron_variant
    Validated:
    by frequency,by alfa
    MAF:
    -=0./0 (ALFA)
    HGVS:
    2.

    rs1491450498 has merged into rs56157358 [Homo sapiens]
      Variant type:
      DELINS
      Alleles:
      GTGTGTGTGTGTGTGTGTGTGT>-,GT,GTGT,GTGTGT,GTGTGTGT,GTGTGTGTGT,GTGTGTGTGTGT,GTGTGTGTGTGTGT,GTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT [Show Flanks]
      Chromosome:
      X:78321153 (GRCh38)
      X:77576650 (GRCh37)
      Canonical SPDI:
      NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000023.11:78321136:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
      Gene:
      CYSLTR1 (Varview)
      Functional Consequence:
      intron_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      GTGTGTGTGTGTGTGTGT=0./0 (ALFA)
      -=0.1028/297 (ALSPAC)
      -=0.4543/1715 (1000Genomes)
      HGVS:
      NC_000023.11:g.78321137GT[8], NC_000023.11:g.78321137GT[9], NC_000023.11:g.78321137GT[10], NC_000023.11:g.78321137GT[11], NC_000023.11:g.78321137GT[12], NC_000023.11:g.78321137GT[13], NC_000023.11:g.78321137GT[14], NC_000023.11:g.78321137GT[15], NC_000023.11:g.78321137GT[16], NC_000023.11:g.78321137GT[17], NC_000023.11:g.78321137GT[18], NC_000023.11:g.78321137GT[20], NC_000023.11:g.78321137GT[21], NC_000023.11:g.78321137GT[22], NC_000023.11:g.78321137GT[23], NC_000023.11:g.78321137GT[24], NC_000023.11:g.78321137GT[25], NC_000023.10:g.77576634GT[8], NC_000023.10:g.77576634GT[9], NC_000023.10:g.77576634GT[10], NC_000023.10:g.77576634GT[11], NC_000023.10:g.77576634GT[12], NC_000023.10:g.77576634GT[13], NC_000023.10:g.77576634GT[14], NC_000023.10:g.77576634GT[15], NC_000023.10:g.77576634GT[16], NC_000023.10:g.77576634GT[17], NC_000023.10:g.77576634GT[18], NC_000023.10:g.77576634GT[20], NC_000023.10:g.77576634GT[21], NC_000023.10:g.77576634GT[22], NC_000023.10:g.77576634GT[23], NC_000023.10:g.77576634GT[24], NC_000023.10:g.77576634GT[25], NG_012809.1:g.11417AC[8], NG_012809.1:g.11417AC[9], NG_012809.1:g.11417AC[10], NG_012809.1:g.11417AC[11], NG_012809.1:g.11417AC[12], NG_012809.1:g.11417AC[13], NG_012809.1:g.11417AC[14], NG_012809.1:g.11417AC[15], NG_012809.1:g.11417AC[16], NG_012809.1:g.11417AC[17], NG_012809.1:g.11417AC[18], NG_012809.1:g.11417AC[20], NG_012809.1:g.11417AC[21], NG_012809.1:g.11417AC[22], NG_012809.1:g.11417AC[23], NG_012809.1:g.11417AC[24], NG_012809.1:g.11417AC[25]
      3.

      rs1491435787 has merged into rs377272877 [Homo sapiens]
        Variant type:
        DELINS
        Alleles:
        GG>-,G,GGG,GGGG,GGGGG [Show Flanks]
        Chromosome:
        X:78280534 (GRCh38)
        X:77536031 (GRCh37)
        Canonical SPDI:
        NC_000023.11:78280525:GGGGGGGGGG:GGGGGGGG,NC_000023.11:78280525:GGGGGGGGGG:GGGGGGGGG,NC_000023.11:78280525:GGGGGGGGGG:GGGGGGGGGGG,NC_000023.11:78280525:GGGGGGGGGG:GGGGGGGGGGGG,NC_000023.11:78280525:GGGGGGGGGG:GGGGGGGGGGGGG
        Gene:
        CYSLTR1 (Varview)
        Functional Consequence:
        intron_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        GGGGGGGGGGGGG=0./0 (ALFA)
        -=0.000015/4 (TOPMED)
        HGVS:
        4.

        rs1491369986 has merged into rs36092711 [Homo sapiens]
          Variant type:
          DELINS
          Alleles:
          TTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTTT,TTTTTTTT [Show Flanks]
          Chromosome:
          X:78295382 (GRCh38)
          X:77550879 (GRCh37)
          Canonical SPDI:
          NC_000023.11:78295370:TTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000023.11:78295370:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000023.11:78295370:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000023.11:78295370:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000023.11:78295370:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000023.11:78295370:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000023.11:78295370:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000023.11:78295370:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT
          Gene:
          CYSLTR1 (Varview)
          Functional Consequence:
          intron_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          TTTTTTTTTTTTT=0./0 (ALFA)
          TT=0.346/1306 (1000Genomes)
          HGVS:
          5.

          rs1491218485 [Homo sapiens]
            Variant type:
            DEL
            Alleles:
            TG>- [Show Flanks]
            Chromosome:
            X:78280525 (GRCh38)
            X:77536022 (GRCh37)
            Canonical SPDI:
            NC_000023.11:78280524:TG:
            Gene:
            CYSLTR1 (Varview)
            Functional Consequence:
            intron_variant
            HGVS:
            6.

            rs1491079867 has merged into rs61463264 [Homo sapiens]
              Variant type:
              DELINS
              Alleles:
              AAAAAA>-,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA [Show Flanks]
              Chromosome:
              X:78284770 (GRCh38)
              X:77540267 (GRCh37)
              Canonical SPDI:
              NC_000023.11:78284759:AAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000023.11:78284759:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000023.11:78284759:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000023.11:78284759:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000023.11:78284759:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000023.11:78284759:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000023.11:78284759:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000023.11:78284759:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000023.11:78284759:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
              Gene:
              CYSLTR1 (Varview)
              Functional Consequence:
              intron_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              AAAAAAAAAAAAAA=0./0 (ALFA)
              -=0.2046/591 (ALSPAC)
              -=0.2079/771 (TWINSUK)
              A=0.4925/1859 (1000Genomes)
              HGVS:
              NC_000023.11:g.78284770_78284775del, NC_000023.11:g.78284774_78284775del, NC_000023.11:g.78284775del, NC_000023.11:g.78284775dup, NC_000023.11:g.78284774_78284775dup, NC_000023.11:g.78284773_78284775dup, NC_000023.11:g.78284768_78284775dup, NC_000023.11:g.78284767_78284775dup, NC_000023.11:g.78284761_78284775dup, NC_000023.10:g.77540267_77540272del, NC_000023.10:g.77540271_77540272del, NC_000023.10:g.77540272del, NC_000023.10:g.77540272dup, NC_000023.10:g.77540271_77540272dup, NC_000023.10:g.77540270_77540272dup, NC_000023.10:g.77540265_77540272dup, NC_000023.10:g.77540264_77540272dup, NC_000023.10:g.77540258_77540272dup, NG_012809.1:g.47826_47831del, NG_012809.1:g.47830_47831del, NG_012809.1:g.47831del, NG_012809.1:g.47831dup, NG_012809.1:g.47830_47831dup, NG_012809.1:g.47829_47831dup, NG_012809.1:g.47824_47831dup, NG_012809.1:g.47823_47831dup, NG_012809.1:g.47817_47831dup
              7.

              rs1490955365 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                T>C [Show Flanks]
                Chromosome:
                X:78287967 (GRCh38)
                X:77543464 (GRCh37)
                Canonical SPDI:
                NC_000023.11:78287966:T:C
                Gene:
                CYSLTR1 (Varview)
                Functional Consequence:
                intron_variant
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                C=0.000285/4 (ALFA)
                C=0.000019/5 (TOPMED)
                C=0.000048/5 (GnomAD)
                HGVS:
                8.

                rs1490949915 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  C>T [Show Flanks]
                  Chromosome:
                  X:78277019 (GRCh38)
                  X:77532516 (GRCh37)
                  Canonical SPDI:
                  NC_000023.11:78277018:C:T
                  Gene:
                  CYSLTR1 (Varview)
                  Functional Consequence:
                  intron_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  T=0./0 (ALFA)
                  T=0.000008/2 (TOPMED)
                  T=0.00009/1 (TOMMO)
                  HGVS:
                  9.

                  rs1490842665 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    T>C [Show Flanks]
                    Chromosome:
                    X:78290308 (GRCh38)
                    X:77545805 (GRCh37)
                    Canonical SPDI:
                    NC_000023.11:78290307:T:C
                    Gene:
                    CYSLTR1 (Varview)
                    Functional Consequence:
                    intron_variant
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    C=0.000071/1 (ALFA)
                    C=0.000004/1 (TOPMED)
                    C=0.00001/1 (GnomAD)
                    HGVS:
                    10.

                    rs1490608987 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      T>C [Show Flanks]
                      Chromosome:
                      X:78316030 (GRCh38)
                      X:77571527 (GRCh37)
                      Canonical SPDI:
                      NC_000023.11:78316029:T:C
                      Gene:
                      CYSLTR1 (Varview)
                      Functional Consequence:
                      intron_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      C=0.000071/1 (ALFA)
                      C=0.000008/2 (TOPMED)
                      C=0.00001/1 (GnomAD)
                      HGVS:
                      11.

                      rs1490484464 [Homo sapiens]
                        Variant type:
                        DELINS
                        Alleles:
                        T>- [Show Flanks]
                        Chromosome:
                        X:78322735 (GRCh38)
                        X:77578232 (GRCh37)
                        Canonical SPDI:
                        NC_000023.11:78322734:TTT:TT
                        Gene:
                        CYSLTR1 (Varview)
                        Functional Consequence:
                        intron_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        TT=0./0 (ALFA)
                        -=0.000008/2 (TOPMED)
                        -=0.00001/1 (GnomAD)
                        HGVS:
                        12.

                        rs1490439670 [Homo sapiens]
                          Variant type:
                          DELINS
                          Alleles:
                          T>- [Show Flanks]
                          Chromosome:
                          X:78287585 (GRCh38)
                          X:77543082 (GRCh37)
                          Canonical SPDI:
                          NC_000023.11:78287584:TTTTT:TTTT
                          Gene:
                          CYSLTR1 (Varview)
                          Functional Consequence:
                          intron_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          TTTT=0./0 (ALFA)
                          -=0.000004/1 (TOPMED)
                          -=0.000019/2 (GnomAD)
                          HGVS:
                          13.

                          rs1490308796 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            C>A [Show Flanks]
                            Chromosome:
                            X:78303661 (GRCh38)
                            X:77559158 (GRCh37)
                            Canonical SPDI:
                            NC_000023.11:78303660:C:A
                            Gene:
                            CYSLTR1 (Varview)
                            Functional Consequence:
                            intron_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            A=0./0 (ALFA)
                            A=0.000011/3 (TOPMED)
                            A=0.000019/2 (GnomAD)
                            HGVS:
                            14.

                            rs1490282997 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              G>T [Show Flanks]
                              Chromosome:
                              X:78302424 (GRCh38)
                              X:77557921 (GRCh37)
                              Canonical SPDI:
                              NC_000023.11:78302423:G:T
                              Gene:
                              CYSLTR1 (Varview)
                              Functional Consequence:
                              intron_variant
                              Validated:
                              by frequency,by alfa
                              MAF:
                              T=0./0 (ALFA)
                              T=0.00001/1 (GnomAD)
                              HGVS:
                              15.

                              rs1490167206 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                C>A,T [Show Flanks]
                                Chromosome:
                                X:78294394 (GRCh38)
                                X:77549891 (GRCh37)
                                Canonical SPDI:
                                NC_000023.11:78294393:C:A,NC_000023.11:78294393:C:T
                                Gene:
                                CYSLTR1 (Varview)
                                Functional Consequence:
                                intron_variant
                                Validated:
                                by frequency,by alfa,by cluster
                                MAF:
                                T=0./0 (ALFA)
                                T=0.000029/3 (GnomAD)
                                HGVS:
                                16.

                                rs1490136777 [Homo sapiens]
                                  Variant type:
                                  INS
                                  Alleles:
                                  ->CCC [Show Flanks]
                                  Chromosome:
                                  X:78289166 (GRCh38)
                                  X:77544664 (GRCh37)
                                  Canonical SPDI:
                                  NC_000023.11:78289166::CCC
                                  Gene:
                                  CYSLTR1 (Varview)
                                  Functional Consequence:
                                  intron_variant
                                  Validated:
                                  by frequency,by alfa
                                  MAF:
                                  CCC=0./0 (ALFA)
                                  CCC=0.00001/1 (GnomAD)
                                  HGVS:
                                  17.

                                  rs1490031439 [Homo sapiens]
                                    Variant type:
                                    SNV
                                    Alleles:
                                    G>A [Show Flanks]
                                    Chromosome:
                                    X:78313883 (GRCh38)
                                    X:77569380 (GRCh37)
                                    Canonical SPDI:
                                    NC_000023.11:78313882:G:A
                                    Gene:
                                    CYSLTR1 (Varview)
                                    Functional Consequence:
                                    intron_variant
                                    Validated:
                                    by frequency,by alfa
                                    MAF:
                                    A=0.000071/1 (ALFA)
                                    A=0.000057/15 (TOPMED)
                                    HGVS:
                                    18.

                                    rs1490003649 [Homo sapiens]
                                      Variant type:
                                      SNV
                                      Alleles:
                                      A>G,T [Show Flanks]
                                      Chromosome:
                                      X:78293866 (GRCh38)
                                      X:77549363 (GRCh37)
                                      Canonical SPDI:
                                      NC_000023.11:78293865:A:G,NC_000023.11:78293865:A:T
                                      Gene:
                                      CYSLTR1 (Varview)
                                      Functional Consequence:
                                      intron_variant
                                      Validated:
                                      by frequency,by alfa,by cluster
                                      MAF:
                                      T=0./0 (ALFA)
                                      G=0.000015/4 (TOPMED)
                                      G=0.000019/2 (GnomAD)
                                      HGVS:
                                      19.

                                      rs1489998812 [Homo sapiens]
                                        Variant type:
                                        SNV
                                        Alleles:
                                        T>C [Show Flanks]
                                        Chromosome:
                                        X:78292910 (GRCh38)
                                        X:77548407 (GRCh37)
                                        Canonical SPDI:
                                        NC_000023.11:78292909:T:C
                                        Gene:
                                        CYSLTR1 (Varview)
                                        Functional Consequence:
                                        intron_variant
                                        Validated:
                                        by frequency,by alfa,by cluster
                                        MAF:
                                        C=0./0 (ALFA)
                                        C=0.000019/2 (GnomAD)
                                        C=0.000045/12 (TOPMED)
                                        HGVS:
                                        20.

                                        rs1489980140 [Homo sapiens]
                                          Variant type:
                                          SNV
                                          Alleles:
                                          G>A [Show Flanks]
                                          Chromosome:
                                          X:78290247 (GRCh38)
                                          X:77545744 (GRCh37)
                                          Canonical SPDI:
                                          NC_000023.11:78290246:G:A
                                          Gene:
                                          CYSLTR1 (Varview)
                                          Functional Consequence:
                                          intron_variant
                                          Validated:
                                          by frequency,by alfa
                                          MAF:
                                          A=0./0 (ALFA)
                                          A=0.00001/1 (GnomAD)
                                          HGVS:

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