SNP Links for Gene (Select 10845) - SNP

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Select item 14915336161.

rs1491533616 has merged into rs529752332 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 15:65151465 (GRCh38)
15:65443803 (GRCh37)
Canonical SPDI:: NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65151456:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: CLPX (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAA=0./0 (ALFA)
AAAAAAAAAAAAA=0.1/4 (GENOME_DK)
-=0.1781/892 (1000Genomes)
HGVS:: NC_000015.10:g.65151465_65151480del, NC_000015.10:g.65151467_65151480del, NC_000015.10:g.65151468_65151480del, NC_000015.10:g.65151469_65151480del, NC_000015.10:g.65151470_65151480del, NC_000015.10:g.65151471_65151480del, NC_000015.10:g.65151472_65151480del, NC_000015.10:g.65151473_65151480del, NC_000015.10:g.65151474_65151480del, NC_000015.10:g.65151475_65151480del, NC_000015.10:g.65151476_65151480del, NC_000015.10:g.65151477_65151480del, NC_000015.10:g.65151478_65151480del, NC_000015.10:g.65151479_65151480del, NC_000015.10:g.65151480del, NC_000015.10:g.65151480dup, NC_000015.10:g.65151479_65151480dup, NC_000015.10:g.65151478_65151480dup, NC_000015.10:g.65151477_65151480dup, NC_000015.10:g.65151476_65151480dup, NC_000015.10:g.65151475_65151480dup, NC_000015.10:g.65151474_65151480dup, NC_000015.10:g.65151472_65151480dup, NC_000015.10:g.65151471_65151480dup, NC_000015.10:g.65151470_65151480dup, NC_000015.9:g.65443803_65443818del, NC_000015.9:g.65443805_65443818del, NC_000015.9:g.65443806_65443818del, NC_000015.9:g.65443807_65443818del, NC_000015.9:g.65443808_65443818del, NC_000015.9:g.65443809_65443818del, NC_000015.9:g.65443810_65443818del, NC_000015.9:g.65443811_65443818del, NC_000015.9:g.65443812_65443818del, NC_000015.9:g.65443813_65443818del, NC_000015.9:g.65443814_65443818del, NC_000015.9:g.65443815_65443818del, NC_000015.9:g.65443816_65443818del, NC_000015.9:g.65443817_65443818del, NC_000015.9:g.65443818del, NC_000015.9:g.65443818dup, NC_000015.9:g.65443817_65443818dup, NC_000015.9:g.65443816_65443818dup, NC_000015.9:g.65443815_65443818dup, NC_000015.9:g.65443814_65443818dup, NC_000015.9:g.65443813_65443818dup, NC_000015.9:g.65443812_65443818dup, NC_000015.9:g.65443810_65443818dup, NC_000015.9:g.65443809_65443818dup, NC_000015.9:g.65443808_65443818dup

Select item 14915251032.

rs1491525103 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A,AA,TA [Show Flanks]
Chromosome:: 15:65151454 (GRCh38)
15:65443793 (GRCh37)
Canonical SPDI:: NC_000015.10:65151454:A:AA,NC_000015.10:65151454:A:AAA,NC_000015.10:65151454:A:ATA
Gene:: CLPX (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: AAA=0./0 (ALFA)
A=0.00046/12 (TOMMO)
HGVS:: NC_000015.10:g.65151455dup, NC_000015.10:g.65151455_65151456insAA, NC_000015.10:g.65151455_65151456insTA, NC_000015.9:g.65443793dup, NC_000015.9:g.65443793_65443794insAA, NC_000015.9:g.65443793_65443794insTA

Select item 14915094863.

rs1491509486 has merged into rs1226717522 [Homo sapiens]

Variant type:: DELINS
Alleles:: TCTCTCTCTCTCTCTCTC>-,TCTC,TCTCTC,TCTCTCTC,TCTCTCTCTC,TCTCTCTCTCTC,TCTCTCTCTCTCTC,TCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC [Show Flanks]
Chromosome:: 15:65160607 (GRCh38)
15:65452945 (GRCh37)
Canonical SPDI:: NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,NC_000015.10:65160592:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TCTCTCTCTCTCTCTCTCTC=0./0 (ALFA)
-=0.00091/241 (TOPMED)
HGVS:: NC_000015.10:g.65160593TC[7], NC_000015.10:g.65160593TC[9], NC_000015.10:g.65160593TC[10], NC_000015.10:g.65160593TC[11], NC_000015.10:g.65160593TC[12], NC_000015.10:g.65160593TC[13], NC_000015.10:g.65160593TC[14], NC_000015.10:g.65160593TC[15], NC_000015.10:g.65160593TC[17], NC_000015.10:g.65160593TC[18], NC_000015.10:g.65160593TC[19], NC_000015.10:g.65160593TC[20], NC_000015.10:g.65160593TC[21], NC_000015.10:g.65160593TC[22], NC_000015.10:g.65160593TC[23], NC_000015.10:g.65160593TC[24], NC_000015.10:g.65160593TC[25], NC_000015.9:g.65452931TC[7], NC_000015.9:g.65452931TC[9], NC_000015.9:g.65452931TC[10], NC_000015.9:g.65452931TC[11], NC_000015.9:g.65452931TC[12], NC_000015.9:g.65452931TC[13], NC_000015.9:g.65452931TC[14], NC_000015.9:g.65452931TC[15], NC_000015.9:g.65452931TC[17], NC_000015.9:g.65452931TC[18], NC_000015.9:g.65452931TC[19], NC_000015.9:g.65452931TC[20], NC_000015.9:g.65452931TC[21], NC_000015.9:g.65452931TC[22], NC_000015.9:g.65452931TC[23], NC_000015.9:g.65452931TC[24], NC_000015.9:g.65452931TC[25]

Select item 14914227474.

rs1491422747 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 15:65183460 (GRCh38)
15:65475798 (GRCh37)
Canonical SPDI:: NC_000015.10:65183459:CA:
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000015.10:g.65183460_65183461del, NC_000015.9:g.65475798_65475799del

Select item 14914092445.

rs1491409244 has merged into rs61002905 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 15:65183467 (GRCh38)
15:65475805 (GRCh37)
Canonical SPDI:: NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000015.10:65183460:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAA=0./0 (ALFA)
A=0.4119/2063 (1000Genomes)
HGVS:: NC_000015.10:g.65183467_65183482del, NC_000015.10:g.65183469_65183482del, NC_000015.10:g.65183470_65183482del, NC_000015.10:g.65183471_65183482del, NC_000015.10:g.65183472_65183482del, NC_000015.10:g.65183473_65183482del, NC_000015.10:g.65183474_65183482del, NC_000015.10:g.65183475_65183482del, NC_000015.10:g.65183476_65183482del, NC_000015.10:g.65183477_65183482del, NC_000015.10:g.65183478_65183482del, NC_000015.10:g.65183479_65183482del, NC_000015.10:g.65183480_65183482del, NC_000015.10:g.65183481_65183482del, NC_000015.10:g.65183482del, NC_000015.10:g.65183482dup, NC_000015.10:g.65183481_65183482dup, NC_000015.10:g.65183480_65183482dup, NC_000015.10:g.65183479_65183482dup, NC_000015.10:g.65183478_65183482dup, NC_000015.10:g.65183477_65183482dup, NC_000015.10:g.65183476_65183482dup, NC_000015.10:g.65183475_65183482dup, NC_000015.10:g.65183474_65183482dup, NC_000015.10:g.65183473_65183482dup, NC_000015.10:g.65183472_65183482dup, NC_000015.10:g.65183471_65183482dup, NC_000015.10:g.65183470_65183482dup, NC_000015.10:g.65183469_65183482dup, NC_000015.10:g.65183468_65183482dup, NC_000015.10:g.65183467_65183482dup, NC_000015.10:g.65183466_65183482dup, NC_000015.10:g.65183463_65183482dup, NC_000015.10:g.65183482_65183483insAAAAAAAAAAAAAAAAAAAAAAA, NC_000015.10:g.65183482_65183483insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000015.10:g.65183461_65183482A[26]GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000015.9:g.65475805_65475820del, NC_000015.9:g.65475807_65475820del, NC_000015.9:g.65475808_65475820del, NC_000015.9:g.65475809_65475820del, NC_000015.9:g.65475810_65475820del, NC_000015.9:g.65475811_65475820del, NC_000015.9:g.65475812_65475820del, NC_000015.9:g.65475813_65475820del, NC_000015.9:g.65475814_65475820del, NC_000015.9:g.65475815_65475820del, NC_000015.9:g.65475816_65475820del, NC_000015.9:g.65475817_65475820del, NC_000015.9:g.65475818_65475820del, NC_000015.9:g.65475819_65475820del, NC_000015.9:g.65475820del, NC_000015.9:g.65475820dup, NC_000015.9:g.65475819_65475820dup, NC_000015.9:g.65475818_65475820dup, NC_000015.9:g.65475817_65475820dup, NC_000015.9:g.65475816_65475820dup, NC_000015.9:g.65475815_65475820dup, NC_000015.9:g.65475814_65475820dup, NC_000015.9:g.65475813_65475820dup, NC_000015.9:g.65475812_65475820dup, NC_000015.9:g.65475811_65475820dup, NC_000015.9:g.65475810_65475820dup, NC_000015.9:g.65475809_65475820dup, NC_000015.9:g.65475808_65475820dup, NC_000015.9:g.65475807_65475820dup, NC_000015.9:g.65475806_65475820dup, NC_000015.9:g.65475805_65475820dup, NC_000015.9:g.65475804_65475820dup, NC_000015.9:g.65475801_65475820dup, NC_000015.9:g.65475820_65475821insAAAAAAAAAAAAAAAAAAAAAAA, NC_000015.9:g.65475820_65475821insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000015.9:g.65475799_65475820A[26]GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1]

Select item 14913832896.

rs1491383289 has merged into rs749248279 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTT>-,TT,TTT,TTTT,TTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 15:65170831 (GRCh38)
15:65463169 (GRCh37)
Canonical SPDI:: NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:65170822:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTT=0./0 (ALFA)
HGVS:: NC_000015.10:g.65170831_65170840del, NC_000015.10:g.65170833_65170840del, NC_000015.10:g.65170834_65170840del, NC_000015.10:g.65170835_65170840del, NC_000015.10:g.65170836_65170840del, NC_000015.10:g.65170838_65170840del, NC_000015.10:g.65170839_65170840del, NC_000015.10:g.65170840del, NC_000015.10:g.65170840dup, NC_000015.10:g.65170839_65170840dup, NC_000015.10:g.65170838_65170840dup, NC_000015.10:g.65170837_65170840dup, NC_000015.10:g.65170836_65170840dup, NC_000015.10:g.65170835_65170840dup, NC_000015.10:g.65170834_65170840dup, NC_000015.10:g.65170833_65170840dup, NC_000015.10:g.65170831_65170840dup, NC_000015.10:g.65170830_65170840dup, NC_000015.9:g.65463169_65463178del, NC_000015.9:g.65463171_65463178del, NC_000015.9:g.65463172_65463178del, NC_000015.9:g.65463173_65463178del, NC_000015.9:g.65463174_65463178del, NC_000015.9:g.65463176_65463178del, NC_000015.9:g.65463177_65463178del, NC_000015.9:g.65463178del, NC_000015.9:g.65463178dup, NC_000015.9:g.65463177_65463178dup, NC_000015.9:g.65463176_65463178dup, NC_000015.9:g.65463175_65463178dup, NC_000015.9:g.65463174_65463178dup, NC_000015.9:g.65463173_65463178dup, NC_000015.9:g.65463172_65463178dup, NC_000015.9:g.65463171_65463178dup, NC_000015.9:g.65463169_65463178dup, NC_000015.9:g.65463168_65463178dup

Select item 14913205677.

rs1491320567 has merged into rs1338638837 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>-,GAGA [Show Flanks]
Chromosome:: 15:65151456 (GRCh38)
15:65443794 (GRCh37)
Canonical SPDI:: NC_000015.10:65151453:GAGA:GA,NC_000015.10:65151453:GAGA:GAGAGA
Gene:: CLPX (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: GAGAGA=0./0 (ALFA)
HGVS:: NC_000015.10:g.65151454GA[1], NC_000015.10:g.65151454GA[3], NC_000015.9:g.65443792GA[1], NC_000015.9:g.65443792GA[3]

Select item 14912218118.

rs1491221811 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TACACA [Show Flanks]
Chromosome:: 15:65160624 (GRCh38)
15:65452963 (GRCh37)
Canonical SPDI:: NC_000015.10:65160624:ACACA:ACACATACACA
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: ACACATACACA=0./0 (ALFA)
ACACAT=0.00005/2 (GnomAD)
HGVS:: NC_000015.10:g.65160625_65160629AC[2]ATACACA[1], NC_000015.9:g.65452963_65452967AC[2]ATACACA[1]

Select item 14911937959.

rs1491193795 has merged into rs9302237 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAA [Show Flanks]
Chromosome:: 15:65186551 (GRCh38)
15:65478889 (GRCh37)
Canonical SPDI:: NC_000015.10:65186538:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000015.10:65186538:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000015.10:65186538:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000015.10:65186538:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000015.10:65186538:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000015.10:65186538:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000015.10:65186538:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA
Gene:: CLPX (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAA=0./0 (ALFA)
AA=0./0 (TWINSUK)
AA=0.0003/1 (ALSPAC)
A=0.1715/859 (1000Genomes)
HGVS:: NC_000015.10:g.65186551_65186556del, NC_000015.10:g.65186553_65186556del, NC_000015.10:g.65186554_65186556del, NC_000015.10:g.65186555_65186556del, NC_000015.10:g.65186556del, NC_000015.10:g.65186556dup, NC_000015.10:g.65186555_65186556dup, NC_000015.9:g.65478889_65478894del, NC_000015.9:g.65478891_65478894del, NC_000015.9:g.65478892_65478894del, NC_000015.9:g.65478893_65478894del, NC_000015.9:g.65478894del, NC_000015.9:g.65478894dup, NC_000015.9:g.65478893_65478894dup

Select item 149115802210.

rs1491158022 [Homo sapiens]

Variant type:: DEL
Alleles:: TT>- [Show Flanks]
Chromosome:: 15:65160592 (GRCh38)
15:65452930 (GRCh37)
Canonical SPDI:: NC_000015.10:65160591:TT:
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.00692/113 (ALFA)
-=0.0035/99 (TOMMO)
HGVS:: NC_000015.10:g.65160592_65160593del, NC_000015.9:g.65452930_65452931del

Select item 149082907711.

rs1490829077 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:65176484 (GRCh38)
15:65468822 (GRCh37)
Canonical SPDI:: NC_000015.10:65176483:T:C
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.65176484T>C, NC_000015.9:g.65468822T>C

Select item 149077025212.

rs1490770252 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:65161926 (GRCh38)
15:65454264 (GRCh37)
Canonical SPDI:: NC_000015.10:65161925:A:G
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0./0 (GnomAD)
G=0.000008/2 (TOPMED)
A=0.5/1 (SGDP_PRJ)
HGVS:: NC_000015.10:g.65161926A>G, NC_000015.9:g.65454264A>G

Select item 149067895213.

rs1490678952 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 15:65152552 (GRCh38)
15:65444890 (GRCh37)
Canonical SPDI:: NC_000015.10:65152551:G:C,NC_000015.10:65152551:G:T
Gene:: CLPX (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency
MAF:: T=0.000011/2 (GnomAD_exomes)
HGVS:: NC_000015.10:g.65152552G>C, NC_000015.10:g.65152552G>T, NC_000015.9:g.65444890G>C, NC_000015.9:g.65444890G>T

Select item 149058282414.

rs1490582824 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:65165250 (GRCh38)
15:65457588 (GRCh37)
Canonical SPDI:: NC_000015.10:65165249:C:T
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000142/2 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000026/7 (TOPMED)
HGVS:: NC_000015.10:g.65165250C>T, NC_000015.9:g.65457588C>T

Select item 149044692815.

rs1490446928 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 15:65184083 (GRCh38)
15:65476421 (GRCh37)
Canonical SPDI:: NC_000015.10:65184082:T:A,NC_000015.10:65184082:T:C
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000015.10:g.65184083T>A, NC_000015.10:g.65184083T>C, NC_000015.9:g.65476421T>A, NC_000015.9:g.65476421T>C

Select item 149042998416.

rs1490429984 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:65183329 (GRCh38)
15:65475667 (GRCh37)
Canonical SPDI:: NC_000015.10:65183328:C:T
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000035/1 (TOMMO)
T=0.000053/14 (TOPMED)
T=0.000684/2 (KOREAN)
HGVS:: NC_000015.10:g.65183329C>T, NC_000015.9:g.65475667C>T

Select item 149037946717.

rs1490379467 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:65180846 (GRCh38)
15:65473184 (GRCh37)
Canonical SPDI:: NC_000015.10:65180845:G:A
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000023/6 (TOPMED)
HGVS:: NC_000015.10:g.65180846G>A, NC_000015.9:g.65473184G>A

Select item 149037804918.

rs1490378049 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 15:65169524 (GRCh38)
15:65461862 (GRCh37)
Canonical SPDI:: NC_000015.10:65169523:G:C
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.65169524G>C, NC_000015.9:g.65461862G>C

Select item 149035341219.

rs1490353412 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 15:65182853 (GRCh38)
15:65475191 (GRCh37)
Canonical SPDI:: NC_000015.10:65182852:G:C
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000015/4 (TOPMED)
C=0.009346/2 (Vietnamese)
HGVS:: NC_000015.10:g.65182853G>C, NC_000015.9:g.65475191G>C

Select item 149035210220.

rs1490352102 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:65168675 (GRCh38)
15:65461013 (GRCh37)
Canonical SPDI:: NC_000015.10:65168674:C:G
Gene:: CLPX (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.65168675C>G, NC_000015.9:g.65461013C>G

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