Links from Gene
Items: 1 to 20 of 1000
1.
rs1491580783 has merged into rs35936108 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CAGCAGCAG>-,CAG,CAGCAG,CAGCAGCAGCAG,CAGCAGCAGCAGCAG,CAGCAGCAGCAGCAGCAG
[Show Flanks]
- Chromosome:
- 4:83307422
(GRCh38)
4:84228575
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83307408:GCAGCAGCAGCAGCAGCAGCAG:GCAGCAGCAGCAG,NC_000004.12:83307408:GCAGCAGCAGCAGCAGCAGCAG:GCAGCAGCAGCAGCAG,NC_000004.12:83307408:GCAGCAGCAGCAGCAGCAGCAG:GCAGCAGCAGCAGCAGCAG,NC_000004.12:83307408:GCAGCAGCAGCAGCAGCAGCAG:GCAGCAGCAGCAGCAGCAGCAGCAG,NC_000004.12:83307408:GCAGCAGCAGCAGCAGCAGCAG:GCAGCAGCAGCAGCAGCAGCAGCAGCAG,NC_000004.12:83307408:GCAGCAGCAGCAGCAGCAGCAG:GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GCAGCAGCAGCAGCAG=0./0
(
ALFA)
GCA=0.11901/596
(1000Genomes)
GCA=0.125/5
(GENOME_DK)
GCA=0.25067/1123
(Estonian)
GCA=0.28056/280
(GoNL)
GCA=0.29667/178
(NorthernSweden)
- HGVS:
NC_000004.12:g.83307410CAG[4], NC_000004.12:g.83307410CAG[5], NC_000004.12:g.83307410CAG[6], NC_000004.12:g.83307410CAG[8], NC_000004.12:g.83307410CAG[9], NC_000004.12:g.83307410CAG[10], NC_000004.11:g.84228563CAG[4], NC_000004.11:g.84228563CAG[5], NC_000004.11:g.84228563CAG[6], NC_000004.11:g.84228563CAG[8], NC_000004.11:g.84228563CAG[9], NC_000004.11:g.84228563CAG[10], NG_028037.1:g.32725TGC[4], NG_028037.1:g.32725TGC[5], NG_028037.1:g.32725TGC[6], NG_028037.1:g.32725TGC[8], NG_028037.1:g.32725TGC[9], NG_028037.1:g.32725TGC[10]
2.
rs1491568552 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 4:83322788
(GRCh38)
4:84243942
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83322788::G
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by cluster
- MAF:
G=0.00402/59
(TOMMO)
G=0.01282/6
(NorthernSweden)
G=0.04983/2517
(GnomAD)
- HGVS:
3.
rs1491497495 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TT>-
[Show Flanks]
- Chromosome:
- 4:83296773
(GRCh38)
4:84217926
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83296772:TT:
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.000007/1
(GnomAD)
- HGVS:
4.
rs1491462213 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->GA
[Show Flanks]
- Chromosome:
- 4:83311781
(GRCh38)
4:84232935
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83311781::GA
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
GA=0.000582/8
(
ALFA)
GA=0.000069/8
(GnomAD)
- HGVS:
6.
rs1491351797 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->TA
[Show Flanks]
- Chromosome:
- 4:83296773
(GRCh38)
4:84217927
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83296773:TATA:TATATA
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TATATA=0./0
(
ALFA)
TA=0.000004/1
(TOPMED)
TA=0.000007/1
(GnomAD)
- HGVS:
8.
rs1491325285 has merged into rs58369674 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAA>-,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 4:83320038
(GRCh38)
4:84241191
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83320028:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000004.12:83320028:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000004.12:83320028:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000004.12:83320028:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000004.12:83320028:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000004.12:83320028:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000004.12:83320028:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000004.12:83320028:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83320028:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83320028:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83320028:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83320028:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAAAAAA=0./0
(
ALFA)
AAA=0.1873/938
(1000Genomes)
- HGVS:
NC_000004.12:g.83320038_83320050del, NC_000004.12:g.83320043_83320050del, NC_000004.12:g.83320045_83320050del, NC_000004.12:g.83320046_83320050del, NC_000004.12:g.83320047_83320050del, NC_000004.12:g.83320048_83320050del, NC_000004.12:g.83320049_83320050del, NC_000004.12:g.83320050del, NC_000004.12:g.83320050dup, NC_000004.12:g.83320049_83320050dup, NC_000004.12:g.83320048_83320050dup, NC_000004.12:g.83320047_83320050dup, NC_000004.11:g.84241191_84241203del, NC_000004.11:g.84241196_84241203del, NC_000004.11:g.84241198_84241203del, NC_000004.11:g.84241199_84241203del, NC_000004.11:g.84241200_84241203del, NC_000004.11:g.84241201_84241203del, NC_000004.11:g.84241202_84241203del, NC_000004.11:g.84241203del, NC_000004.11:g.84241203dup, NC_000004.11:g.84241202_84241203dup, NC_000004.11:g.84241201_84241203dup, NC_000004.11:g.84241200_84241203dup, NG_028037.1:g.20113_20125del, NG_028037.1:g.20118_20125del, NG_028037.1:g.20120_20125del, NG_028037.1:g.20121_20125del, NG_028037.1:g.20122_20125del, NG_028037.1:g.20123_20125del, NG_028037.1:g.20124_20125del, NG_028037.1:g.20125del, NG_028037.1:g.20125dup, NG_028037.1:g.20124_20125dup, NG_028037.1:g.20123_20125dup, NG_028037.1:g.20122_20125dup
10.
rs1491286248 has merged into rs757562812 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 4:83299373
(GRCh38)
4:84220526
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:83299363:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAA=0./0
(
ALFA)
-=0.325/13
(GENOME_DK)
- HGVS:
NC_000004.12:g.83299373_83299389del, NC_000004.12:g.83299375_83299389del, NC_000004.12:g.83299376_83299389del, NC_000004.12:g.83299377_83299389del, NC_000004.12:g.83299378_83299389del, NC_000004.12:g.83299379_83299389del, NC_000004.12:g.83299380_83299389del, NC_000004.12:g.83299381_83299389del, NC_000004.12:g.83299382_83299389del, NC_000004.12:g.83299383_83299389del, NC_000004.12:g.83299384_83299389del, NC_000004.12:g.83299385_83299389del, NC_000004.12:g.83299386_83299389del, NC_000004.12:g.83299387_83299389del, NC_000004.12:g.83299388_83299389del, NC_000004.12:g.83299389del, NC_000004.12:g.83299389dup, NC_000004.12:g.83299388_83299389dup, NC_000004.12:g.83299387_83299389dup, NC_000004.12:g.83299386_83299389dup, NC_000004.12:g.83299385_83299389dup, NC_000004.12:g.83299384_83299389dup, NC_000004.12:g.83299381_83299389dup, NC_000004.11:g.84220526_84220542del, NC_000004.11:g.84220528_84220542del, NC_000004.11:g.84220529_84220542del, NC_000004.11:g.84220530_84220542del, NC_000004.11:g.84220531_84220542del, NC_000004.11:g.84220532_84220542del, NC_000004.11:g.84220533_84220542del, NC_000004.11:g.84220534_84220542del, NC_000004.11:g.84220535_84220542del, NC_000004.11:g.84220536_84220542del, NC_000004.11:g.84220537_84220542del, NC_000004.11:g.84220538_84220542del, NC_000004.11:g.84220539_84220542del, NC_000004.11:g.84220540_84220542del, NC_000004.11:g.84220541_84220542del, NC_000004.11:g.84220542del, NC_000004.11:g.84220542dup, NC_000004.11:g.84220541_84220542dup, NC_000004.11:g.84220540_84220542dup, NC_000004.11:g.84220539_84220542dup, NC_000004.11:g.84220538_84220542dup, NC_000004.11:g.84220537_84220542dup, NC_000004.11:g.84220534_84220542dup, NG_028037.1:g.40774_40790del, NG_028037.1:g.40776_40790del, NG_028037.1:g.40777_40790del, NG_028037.1:g.40778_40790del, NG_028037.1:g.40779_40790del, NG_028037.1:g.40780_40790del, NG_028037.1:g.40781_40790del, NG_028037.1:g.40782_40790del, NG_028037.1:g.40783_40790del, NG_028037.1:g.40784_40790del, NG_028037.1:g.40785_40790del, NG_028037.1:g.40786_40790del, NG_028037.1:g.40787_40790del, NG_028037.1:g.40788_40790del, NG_028037.1:g.40789_40790del, NG_028037.1:g.40790del, NG_028037.1:g.40790dup, NG_028037.1:g.40789_40790dup, NG_028037.1:g.40788_40790dup, NG_028037.1:g.40787_40790dup, NG_028037.1:g.40786_40790dup, NG_028037.1:g.40785_40790dup, NG_028037.1:g.40782_40790dup
12.
rs1491258035 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 4:83322838
(GRCh38)
4:84243992
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83322838::G
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by cluster
- MAF:
G=0.00044/7
(TOMMO)
- HGVS:
13.
rs1491180814 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TT>-
[Show Flanks]
- Chromosome:
- 4:83322839
(GRCh38)
4:84243992
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83322837:TTT:T
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.001602/19
(
ALFA)
-=0.000804/13
(TOMMO)
-=0.003951/488
(GnomAD)
- HGVS:
14.
rs1491137707 has merged into rs1553920741 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TT>-,TTTT,TTTTTT,TTTTTTT,TTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 4:83322789
(GRCh38)
4:84243942
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83322787:TTT:T,NC_000004.12:83322787:TTT:TTTTT,NC_000004.12:83322787:TTT:TTTTTTT,NC_000004.12:83322787:TTT:TTTTTTTT,NC_000004.12:83322787:TTT:TTTTTTTTTTTTTTTTT
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTT=0./0
(
ALFA)
-=0.325/13
(GENOME_DK)
- HGVS:
NC_000004.12:g.83322789_83322790del, NC_000004.12:g.83322789_83322790dup, NC_000004.12:g.83322790_83322791insTTTT, NC_000004.12:g.83322790_83322791insTTTTT, NC_000004.12:g.83322790_83322791insTTTTTTTTTTTTTT, NC_000004.11:g.84243942_84243943del, NC_000004.11:g.84243942_84243943dup, NC_000004.11:g.84243943_84243944insTTTT, NC_000004.11:g.84243943_84243944insTTTTT, NC_000004.11:g.84243943_84243944insTTTTTTTTTTTTTT, NG_028037.1:g.17365_17366del, NG_028037.1:g.17365_17366dup, NG_028037.1:g.17366_17367insAAAA, NG_028037.1:g.17366_17367insAAAAA, NG_028037.1:g.17366_17367insAAAAAAAAAAAAAA
15.
rs1490976971 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->T
[Show Flanks]
- Chromosome:
- 4:83310512
(GRCh38)
4:84231666
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83310512:TTTTTTT:TTTTTTTT
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTT=0./0
(
ALFA)
T=0.000019/5
(TOPMED)
T=0.000036/5
(GnomAD)
- HGVS:
17.
rs1490751791 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 4:83302879
(GRCh38)
4:84224032
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83302878:G:A
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000071/1
(
ALFA)
A=0.000008/2
(TOPMED)
A=0.000021/3
(GnomAD)
- HGVS:
18.
rs1490726032 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 4:83317404
(GRCh38)
4:84238557
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83317403:A:G
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
- HGVS:
19.
rs1490612661 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 4:83319784
(GRCh38)
4:84240937
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83319783:G:C
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency
- MAF:
C=0.000007/1
(GnomAD)
- HGVS:
20.
rs1490553323 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- G>-
[Show Flanks]
- Chromosome:
- 4:83318892
(GRCh38)
4:84240045
(GRCh37)
- Canonical SPDI:
- NC_000004.12:83318891:GG:G
- Gene:
- HPSE (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GG=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.000007/1
(GnomAD)
- HGVS: