SNP Links for Gene (Select 1087) - SNP

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Select item 14911751821.

rs1491175182 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CGTT [Show Flanks]
Chromosome:: 19:41679629 (GRCh38)
19:42183561 (GRCh37)
Canonical SPDI:: NC_000019.10:41679629:TT:TTCGTT
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TTCGTT=0./0 (ALFA)
TTCG=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.41679631_41679632insCGTT, NW_004775434.1:g.248670_248671insCGTT, NT_187620.1:g.2371_2372insCGAA, NC_000019.9:g.42183563_42183564insCGTT

Select item 14909370912.

rs1490937091 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:41673801 (GRCh38)
19:42177729 (GRCh37)
Canonical SPDI:: NC_000019.10:41673800:C:G
Gene:: CEACAM7 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.41673801C>G, NW_004775434.1:g.242840C>G, NT_187620.1:g.8200G>C, NC_000019.9:g.42177729C>G, NM_006890.5:c.*995G>C, NM_006890.4:c.*995G>C, NM_006890.3:c.*995G>C, NM_001291485.2:c.*975G>C, NM_001291485.1:c.*975G>C

Select item 14906740743.

rs1490674074 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:41682638 (GRCh38)
19:42186569 (GRCh37)
Canonical SPDI:: NC_000019.10:41682637:G:A
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.41682638G>A, NW_004775434.1:g.251677G>A, NC_000019.9:g.42186569G>A

Select item 14901015764.

rs1490101576 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:41679759 (GRCh38)
19:42183691 (GRCh37)
Canonical SPDI:: NC_000019.10:41679758:A:G
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
G=0.000035/1 (TOMMO)
HGVS:: NC_000019.10:g.41679759A>G, NW_004775434.1:g.248798A>G, NT_187620.1:g.2242T>C, NC_000019.9:g.42183691A>G

Select item 14900299385.

rs1490029938 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:41680528 (GRCh38)
19:42184459 (GRCh37)
Canonical SPDI:: NC_000019.10:41680527:C:G
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.41680528C>G, NW_004775434.1:g.249567C>G, NT_187620.1:g.1473G>C, NC_000019.9:g.42184459C>G

Select item 14898166276.

rs1489816627 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 19:41687756 (GRCh38)
19:42191685 (GRCh37)
Canonical SPDI:: NC_000019.10:41687755:G:A,NC_000019.10:41687755:G:T
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.41687756G>A, NC_000019.10:g.41687756G>T, NW_004775434.1:g.256795G>A, NW_004775434.1:g.256795G>T, NC_000019.9:g.42191685G>A, NC_000019.9:g.42191685G>T

Select item 14897431457.

rs1489743145 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:41687226 (GRCh38)
19:42191157 (GRCh37)
Canonical SPDI:: NC_000019.10:41687225:G:A
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.41687226G>A, NW_004775434.1:g.256265G>A, NC_000019.9:g.42191157G>A

Select item 14897115938.

rs1489711593 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:41688311 (GRCh38)
19:42192240 (GRCh37)
Canonical SPDI:: NC_000019.10:41688310:C:G
Gene:: CEACAM7 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.41688311C>G, NW_004775434.1:g.257350C>G, NC_000019.9:g.42192240C>G

Select item 14895892429.

rs1489589242 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:41683492 (GRCh38)
19:42187423 (GRCh37)
Canonical SPDI:: NC_000019.10:41683491:C:T
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.41683492C>T, NW_004775434.1:g.252531C>T, NC_000019.9:g.42187423C>T

Select item 148956738110.

rs1489567381 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:41675065 (GRCh38)
19:42178993 (GRCh37)
Canonical SPDI:: NC_000019.10:41675064:G:T
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000019.10:g.41675065G>T, NW_004775434.1:g.244104G>T, NT_187620.1:g.6936C>A, NC_000019.9:g.42178993G>T

Select item 148951595411.

rs1489515954 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 19:41676263 (GRCh38)
19:42180191 (GRCh37)
Canonical SPDI:: NC_000019.10:41676262:A:C
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000026/7 (TOPMED)
C=0.000036/5 (GnomAD)
HGVS:: NC_000019.10:g.41676263A>C, NW_004775434.1:g.245302A>C, NT_187620.1:g.5738T>G, NC_000019.9:g.42180191A>C

Select item 148935872212.

rs1489358722 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:41683103 (GRCh38)
19:42187034 (GRCh37)
Canonical SPDI:: NC_000019.10:41683102:A:G
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.41683103A>G, NW_004775434.1:g.252142A>G, NC_000019.9:g.42187034A>G

Select item 148896567713.

rs1488965677 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 19:41682501 (GRCh38)
19:42186432 (GRCh37)
Canonical SPDI:: NC_000019.10:41682500:A:G,NC_000019.10:41682500:A:T
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000021/3 (GnomAD)
HGVS:: NC_000019.10:g.41682501A>G, NC_000019.10:g.41682501A>T, NW_004775434.1:g.251540A>G, NW_004775434.1:g.251540A>T, NC_000019.9:g.42186432A>G, NC_000019.9:g.42186432A>T

Select item 148865132514.

rs1488651325 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:41679638 (GRCh38)
19:42183570 (GRCh37)
Canonical SPDI:: NC_000019.10:41679637:T:C
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000015/2 (GnomAD)
HGVS:: NC_000019.10:g.41679638T>C, NW_004775434.1:g.248677T>C, NT_187620.1:g.2363A>G, NC_000019.9:g.42183570T>C

Select item 148848510815.

rs1488485108 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:41675449 (GRCh38)
19:42179377 (GRCh37)
Canonical SPDI:: NC_000019.10:41675448:C:G
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.41675449C>G, NW_004775434.1:g.244488C>G, NT_187620.1:g.6552G>C, NC_000019.9:g.42179377C>G

Select item 148847823916.

rs1488478239 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:41681630 (GRCh38)
19:42185561 (GRCh37)
Canonical SPDI:: NC_000019.10:41681629:C:T
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.41681630C>T, NW_004775434.1:g.250669C>T, NT_187620.1:g.371G>A, NC_000019.9:g.42185561C>T

Select item 148840861917.

rs1488408619 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:41682728 (GRCh38)
19:42186659 (GRCh37)
Canonical SPDI:: NC_000019.10:41682727:C:G
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.41682728C>G, NW_004775434.1:g.251767C>G, NC_000019.9:g.42186659C>G

Select item 148820412818.

rs1488204128 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:41685898 (GRCh38)
19:42189829 (GRCh37)
Canonical SPDI:: NC_000019.10:41685897:G:A
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.41685898G>A, NW_004775434.1:g.254937G>A, NC_000019.9:g.42189829G>A

Select item 148804981719.

rs1488049817 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:41677404 (GRCh38)
19:42181332 (GRCh37)
Canonical SPDI:: NC_000019.10:41677403:C:T
Gene:: CEACAM7 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000075/3 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.000446/2 (Estonian)
HGVS:: NC_000019.10:g.41677404C>T, NW_004775434.1:g.246443C>T, NT_187620.1:g.4597G>A, NC_000019.9:g.42181332C>T, NM_006890.5:c.*8G>A, NM_006890.4:c.*8G>A, NM_006890.3:c.*8G>A, NM_001291485.1:c.*8G>A, NM_001291485.2:c.*8G>A

Select item 148799968020.

rs1487999680 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:41678483 (GRCh38)
19:42182411 (GRCh37)
Canonical SPDI:: NC_000019.10:41678482:C:G
Gene:: CEACAM7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.41678483C>G, NW_004775434.1:g.247522C>G, NT_187620.1:g.3518G>C, NC_000019.9:g.42182411C>G

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