Links from Gene
Items: 1 to 20 of 2521
1.
rs1491408002 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->T
[Show Flanks]
- Chromosome:
- 15:90074523
(GRCh38)
15:90617756
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90074523:T:TT
- Gene:
- ZNF710 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,intron_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
TT=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
NC_000015.10:g.90074524dup, NC_000015.9:g.90617756dup, XM_005254907.5:c.*19dup, XM_005254907.4:c.*19dup, XM_005254907.3:c.*19dup, XM_005254907.2:c.*19dup, XM_005254907.1:c.*19dup, XM_005254906.5:c.*19dup, XM_005254906.4:c.*19dup, XM_005254906.3:c.*19dup, XM_005254906.2:c.*19dup, XM_005254906.1:c.*19dup, XM_011521542.4:c.*19dup, XM_011521542.3:c.*19dup, XM_011521542.2:c.*19dup, XM_011521542.1:c.*19dup, XM_047432485.1:c.*19dup, XM_047432482.1:c.*19dup, XM_047432484.1:c.*19dup, NR_146321.1:n.1159dup
2.
rs1491169024 has merged into rs34572330 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTT>-,T,TT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 15:90077249
(GRCh38)
15:90620481
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:90077239:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- ZNF710 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant,3_prime_UTR_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTT=0./0
(
ALFA)
TTT=0.3466/1736
(1000Genomes)
- HGVS:
NC_000015.10:g.90077249_90077261del, NC_000015.10:g.90077250_90077261del, NC_000015.10:g.90077251_90077261del, NC_000015.10:g.90077255_90077261del, NC_000015.10:g.90077256_90077261del, NC_000015.10:g.90077257_90077261del, NC_000015.10:g.90077258_90077261del, NC_000015.10:g.90077259_90077261del, NC_000015.10:g.90077260_90077261del, NC_000015.10:g.90077261del, NC_000015.10:g.90077261dup, NC_000015.10:g.90077260_90077261dup, NC_000015.10:g.90077259_90077261dup, NC_000015.10:g.90077257_90077261dup, NC_000015.10:g.90077256_90077261dup, NC_000015.9:g.90620481_90620493del, NC_000015.9:g.90620482_90620493del, NC_000015.9:g.90620483_90620493del, NC_000015.9:g.90620487_90620493del, NC_000015.9:g.90620488_90620493del, NC_000015.9:g.90620489_90620493del, NC_000015.9:g.90620490_90620493del, NC_000015.9:g.90620491_90620493del, NC_000015.9:g.90620492_90620493del, NC_000015.9:g.90620493del, NC_000015.9:g.90620493dup, NC_000015.9:g.90620492_90620493dup, NC_000015.9:g.90620491_90620493dup, NC_000015.9:g.90620489_90620493dup, NC_000015.9:g.90620488_90620493dup, XM_011521543.4:c.*2599_*2611del, XM_011521543.4:c.*2600_*2611del, XM_011521543.4:c.*2601_*2611del, XM_011521543.4:c.*2605_*2611del, XM_011521543.4:c.*2606_*2611del, XM_011521543.4:c.*2607_*2611del, XM_011521543.4:c.*2608_*2611del, XM_011521543.4:c.*2609_*2611del, XM_011521543.4:c.*2610_*2611del, XM_011521543.4:c.*2611del, XM_011521543.4:c.*2611dup, XM_011521543.4:c.*2610_*2611dup, XM_011521543.4:c.*2609_*2611dup, XM_011521543.4:c.*2607_*2611dup, XM_011521543.4:c.*2606_*2611dup
3.
rs1491084494 has merged into rs35832666 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 15:90078220
(GRCh38)
15:90621452
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90078211:AAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000015.10:90078211:AAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000015.10:90078211:AAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000015.10:90078211:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000015.10:90078211:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000015.10:90078211:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000015.10:90078211:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000015.10:90078211:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000015.10:90078211:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000015.10:90078211:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000015.10:90078211:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000015.10:90078211:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000015.10:90078211:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA
- Gene:
- ZNF710 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant,3_prime_UTR_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAA=0./0
(
ALFA)
-=0.0964/483
(1000Genomes)
- HGVS:
NC_000015.10:g.90078220_90078228del, NC_000015.10:g.90078222_90078228del, NC_000015.10:g.90078223_90078228del, NC_000015.10:g.90078224_90078228del, NC_000015.10:g.90078225_90078228del, NC_000015.10:g.90078226_90078228del, NC_000015.10:g.90078227_90078228del, NC_000015.10:g.90078228del, NC_000015.10:g.90078228dup, NC_000015.10:g.90078227_90078228dup, NC_000015.10:g.90078226_90078228dup, NC_000015.10:g.90078225_90078228dup, NC_000015.10:g.90078224_90078228dup, NC_000015.9:g.90621452_90621460del, NC_000015.9:g.90621454_90621460del, NC_000015.9:g.90621455_90621460del, NC_000015.9:g.90621456_90621460del, NC_000015.9:g.90621457_90621460del, NC_000015.9:g.90621458_90621460del, NC_000015.9:g.90621459_90621460del, NC_000015.9:g.90621460del, NC_000015.9:g.90621460dup, NC_000015.9:g.90621459_90621460dup, NC_000015.9:g.90621458_90621460dup, NC_000015.9:g.90621457_90621460dup, NC_000015.9:g.90621456_90621460dup, XM_011521543.4:c.*3570_*3578del, XM_011521543.4:c.*3572_*3578del, XM_011521543.4:c.*3573_*3578del, XM_011521543.4:c.*3574_*3578del, XM_011521543.4:c.*3575_*3578del, XM_011521543.4:c.*3576_*3578del, XM_011521543.4:c.*3577_*3578del, XM_011521543.4:c.*3578del, XM_011521543.4:c.*3578dup, XM_011521543.4:c.*3577_*3578dup, XM_011521543.4:c.*3576_*3578dup, XM_011521543.4:c.*3575_*3578dup, XM_011521543.4:c.*3574_*3578dup
5.
rs1490617412 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 15:90080935
(GRCh38)
15:90624167
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90080934:A:G
- Gene:
- ZNF710 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.000071/1
(
ALFA)
G=0./0
(PRJEB36033)
G=0.000007/1
(GnomAD)
G=0.000034/9
(TOPMED)
- HGVS:
6.
rs1490593715 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 15:90082707
(GRCh38)
15:90625939
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90082706:C:T
- Gene:
- IDH2 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.000071/1
(
ALFA)
T=0.000004/1
(TOPMED)
T=0.000007/1
(GnomAD)
- HGVS:
7.
rs1490588846 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,C
[Show Flanks]
- Chromosome:
- 15:90082741
(GRCh38)
15:90625973
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90082740:G:A,NC_000015.10:90082740:G:C
- Gene:
- IDH2 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000015/4
(TOPMED)
- HGVS:
8.
rs1490562583 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 15:90083609
(GRCh38)
15:90626841
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90083608:T:C
- Gene:
- IDH2 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- upstream_transcript_variant,3_prime_UTR_variant,downstream_transcript_variant,2KB_upstream_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000015/4
(TOPMED)
- HGVS:
10.
rs1490484529 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,C
[Show Flanks]
- Chromosome:
- 15:90076674
(GRCh38)
15:90619906
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90076673:G:A,NC_000015.10:90076673:G:C
- Gene:
- ZNF710 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,3_prime_UTR_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
- HGVS:
11.
rs1490454995 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 15:90074118
(GRCh38)
15:90617350
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90074117:G:A
- Gene:
- ZNF710 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- synonymous_variant,coding_sequence_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
- HGVS:
NC_000015.10:g.90074118G>A, NC_000015.9:g.90617350G>A, XM_005254907.5:c.1653G>A, XM_005254907.4:c.1653G>A, XM_005254907.3:c.1653G>A, XM_005254907.2:c.1653G>A, XM_005254907.1:c.1653G>A, XM_005254906.5:c.1653G>A, XM_005254906.4:c.1653G>A, XM_005254906.3:c.1653G>A, XM_005254906.2:c.1653G>A, XM_005254906.1:c.1653G>A, XM_011521543.4:c.1722G>A, XM_011521543.3:c.1653G>A, XM_011521543.2:c.1653G>A, XM_011521543.1:c.1653G>A, NM_198526.4:c.1653G>A, NM_198526.3:c.1653G>A, NM_198526.2:c.1653G>A, XM_011521542.4:c.1653G>A, XM_011521542.3:c.1653G>A, XM_011521542.2:c.1653G>A, XM_011521542.1:c.1653G>A, XM_047432487.1:c.1653G>A, XM_047432486.1:c.1695G>A, XM_047432488.1:c.1653G>A, XM_047432483.1:c.1722G>A, XM_047432485.1:c.1653G>A, XM_047432482.1:c.1722G>A, XM_047432484.1:c.1653G>A
12.
rs1490091328 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 15:90082335
(GRCh38)
15:90625567
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90082334:C:T
- Gene:
- ZNF710 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000008/2
(TOPMED)
- HGVS:
14.
rs1489962065 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>A
[Show Flanks]
- Chromosome:
- 15:90075217
(GRCh38)
15:90618449
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90075216:T:A
- Gene:
- ZNF710 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,3_prime_UTR_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.00003/8
(TOPMED)
- HGVS:
15.
rs1489480137 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>T
[Show Flanks]
- Chromosome:
- 15:90079033
(GRCh38)
15:90622265
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90079032:A:T
- Gene:
- ZNF710 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,3_prime_UTR_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
16.
rs1489251565 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 15:90075102
(GRCh38)
15:90618334
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90075101:G:C
- Gene:
- ZNF710 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,3_prime_UTR_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000008/2
(TOPMED)
- HGVS:
17.
rs1487794896 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 15:90083597
(GRCh38)
15:90626829
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90083596:G:A
- Gene:
- IDH2 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- upstream_transcript_variant,3_prime_UTR_variant,downstream_transcript_variant,2KB_upstream_variant,genic_downstream_transcript_variant
- Validated:
- by frequency
- MAF:
A=0.000007/1
(GnomAD)
- HGVS:
18.
rs1487525033 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 15:90077996
(GRCh38)
15:90621228
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90077995:T:C
- Gene:
- ZNF710 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,3_prime_UTR_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
19.
rs1487497960 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 15:90077707
(GRCh38)
15:90620939
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90077706:A:G
- Gene:
- ZNF710 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,3_prime_UTR_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
- HGVS:
20.
rs1487487456 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>A
[Show Flanks]
- Chromosome:
- 15:90083614
(GRCh38)
15:90626846
(GRCh37)
- Canonical SPDI:
- NC_000015.10:90083613:T:A
- Gene:
- IDH2 (Varview), ZNF710-AS1 (Varview)
- Functional Consequence:
- upstream_transcript_variant,3_prime_UTR_variant,downstream_transcript_variant,2KB_upstream_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000008/2
(TOPMED)
A=0.000014/2
(GnomAD)
- HGVS: