SNP Links for Gene (Select 11326) - SNP

Warning: The NCBI web site requires JavaScript to function. more...

Links from Gene

Items: 1 to 20 of 1000

<< First< Prev

Page of 50

Next >Last >>

Select item 14915753331.

rs1491575333 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TT [Show Flanks]
Chromosome:: X:66036715 (GRCh38)
X:65256558 (GRCh37)
Canonical SPDI:: NC_000023.11:66036715:T:TTT
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: TT=0.00002/1 (GnomAD)
HGVS:: NC_000023.11:g.66036716_66036717insTT, NC_000023.10:g.65256558_65256559insTT, NG_021306.1:g.8410_8411insAA

Select item 14915137062.

rs1491513706 [Homo sapiens]

Variant type:: DEL
Alleles:: GC>- [Show Flanks]
Chromosome:: X:66038467 (GRCh38)
X:65258309 (GRCh37)
Canonical SPDI:: NC_000023.11:66038466:GC:
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.66038467_66038468del, NC_000023.10:g.65258309_65258310del, NG_021306.1:g.6658_6659del

Select item 14914902353.

rs1491490235 has merged into rs1378627939 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>-,TATA [Show Flanks]
Chromosome:: X:66036679 (GRCh38)
X:65256521 (GRCh37)
Canonical SPDI:: NC_000023.11:66036671:ATATATATA:ATATATA,NC_000023.11:66036671:ATATATATA:ATATATATATA
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATATATA=0./0 (ALFA)
-=0.000102/27 (TOPMED)
-=0.000832/4 (1000Genomes)
-=0.011082/142 (TOMMO)
HGVS:: NC_000023.11:g.66036673TA[3], NC_000023.11:g.66036673TA[5], NC_000023.10:g.65256515TA[3], NC_000023.10:g.65256515TA[5], NG_021306.1:g.8447AT[3], NG_021306.1:g.8447AT[5]

Select item 14914848934.

rs1491484893 [Homo sapiens]

Variant type:: DEL
Alleles:: AA>- [Show Flanks]
Chromosome:: X:66036671 (GRCh38)
X:65256513 (GRCh37)
Canonical SPDI:: NC_000023.11:66036670:AA:
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.0006/35 (GnomAD)
HGVS:: NC_000023.11:g.66036671_66036672del, NC_000023.10:g.65256513_65256514del, NG_021306.1:g.8454_8455del

Select item 14914367435.

rs1491436743 has merged into rs747112398 [Homo sapiens]

Variant type:: DELINS
Alleles:: TCTCTC>-,TC,TCTC,TCTCTCTC,TCTCTCTCTC [Show Flanks]
Chromosome:: X:66038477 (GRCh38)
X:65258319 (GRCh37)
Canonical SPDI:: NC_000023.11:66038467:CTCTCTCTCTCTCTC:CTCTCTCTC,NC_000023.11:66038467:CTCTCTCTCTCTCTC:CTCTCTCTCTC,NC_000023.11:66038467:CTCTCTCTCTCTCTC:CTCTCTCTCTCTC,NC_000023.11:66038467:CTCTCTCTCTCTCTC:CTCTCTCTCTCTCTCTC,NC_000023.11:66038467:CTCTCTCTCTCTCTC:CTCTCTCTCTCTCTCTCTC
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTCTCTCTCTC=0./0 (ALFA)
HGVS:: NC_000023.11:g.66038469TC[4], NC_000023.11:g.66038469TC[5], NC_000023.11:g.66038469TC[6], NC_000023.11:g.66038469TC[8], NC_000023.11:g.66038469TC[9], NC_000023.10:g.65258311TC[4], NC_000023.10:g.65258311TC[5], NC_000023.10:g.65258311TC[6], NC_000023.10:g.65258311TC[8], NC_000023.10:g.65258311TC[9], NG_021306.1:g.6645AG[4], NG_021306.1:g.6645AG[5], NG_021306.1:g.6645AG[6], NG_021306.1:g.6645AG[8], NG_021306.1:g.6645AG[9]

Select item 14914360286.

rs1491436028 has merged into rs1217768220 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATAT>-,AT,ATATAT [Show Flanks]
Chromosome:: X:66036721 (GRCh38)
X:65256563 (GRCh37)
Canonical SPDI:: NC_000023.11:66036714:ATATATATAT:ATATAT,NC_000023.11:66036714:ATATATATAT:ATATATAT,NC_000023.11:66036714:ATATATATAT:ATATATATATAT
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATAT=0./0 (ALFA)
-=0.000015/4 (TOPMED)
-=0.000186/2 (TOMMO)
HGVS:: NC_000023.11:g.66036715AT[3], NC_000023.11:g.66036715AT[4], NC_000023.11:g.66036715AT[6], NC_000023.10:g.65256557AT[3], NC_000023.10:g.65256557AT[4], NC_000023.10:g.65256557AT[6], NG_021306.1:g.8402AT[3], NG_021306.1:g.8402AT[4], NG_021306.1:g.8402AT[6]

Select item 14913767667.

rs1491376766 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: X:66036822 (GRCh38)
X:65256665 (GRCh37)
Canonical SPDI:: NC_000023.11:66036822:A:AA
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AA=0./0 (ALFA)
HGVS:: NC_000023.11:g.66036823dup, NC_000023.10:g.65256665dup, NG_021306.1:g.8303dup

Select item 14912761588.

rs1491276158 has merged into rs1338274451 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>-,TATA [Show Flanks]
Chromosome:: X:66036830 (GRCh38)
X:65256672 (GRCh37)
Canonical SPDI:: NC_000023.11:66036821:TATATATATA:TATATATA,NC_000023.11:66036821:TATATATATA:TATATATATATA
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATATATA=0.00007/1 (ALFA)
-=0.00006/1 (TOMMO)
HGVS:: NC_000023.11:g.66036822TA[4], NC_000023.11:g.66036822TA[6], NC_000023.10:g.65256664TA[4], NC_000023.10:g.65256664TA[6], NG_021306.1:g.8295TA[4], NG_021306.1:g.8295TA[6]

Select item 14912299369.

rs1491229936 has merged into rs1211655954 [Homo sapiens]

Variant type:: DELINS
Alleles:: GG>-,G,GGG,GGGG,GGGGGG [Show Flanks]
Chromosome:: X:66034770 (GRCh38)
X:65254612 (GRCh37)
Canonical SPDI:: NC_000023.11:66034766:GGGGG:GGG,NC_000023.11:66034766:GGGGG:GGGG,NC_000023.11:66034766:GGGGG:GGGGGG,NC_000023.11:66034766:GGGGG:GGGGGGG,NC_000023.11:66034766:GGGGG:GGGGGGGGG
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGGG=0./0 (ALFA)
G=0.0069/82 (TOMMO)
HGVS:: NC_000023.11:g.66034770_66034771del, NC_000023.11:g.66034771del, NC_000023.11:g.66034771dup, NC_000023.11:g.66034770_66034771dup, NC_000023.11:g.66034768_66034771dup, NC_000023.10:g.65254612_65254613del, NC_000023.10:g.65254613del, NC_000023.10:g.65254613dup, NC_000023.10:g.65254612_65254613dup, NC_000023.10:g.65254610_65254613dup, NG_021306.1:g.10358_10359del, NG_021306.1:g.10359del, NG_021306.1:g.10359dup, NG_021306.1:g.10358_10359dup, NG_021306.1:g.10356_10359dup

Select item 149122777910.

rs1491227779 [Homo sapiens]

Variant type:: DEL
Alleles:: AA>- [Show Flanks]
Chromosome:: X:66036714 (GRCh38)
X:65256556 (GRCh37)
Canonical SPDI:: NC_000023.11:66036713:AA:
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.00004/2 (GnomAD)
HGVS:: NC_000023.11:g.66036714_66036715del, NC_000023.10:g.65256556_65256557del, NG_021306.1:g.8411_8412del

Select item 149122694111.

rs1491226941 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: X:66034766 (GRCh38)
X:65254608 (GRCh37)
Canonical SPDI:: NC_000023.11:66034765:TG:
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00784/93 (ALFA)
HGVS:: NC_000023.11:g.66034766_66034767del, NC_000023.10:g.65254608_65254609del, NG_021306.1:g.10359_10360del

Select item 149122648812.

rs1491226488 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: X:66037534 (GRCh38)
X:65257377 (GRCh37)
Canonical SPDI:: NC_000023.11:66037534:A:AA
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000093/1 (GnomAD)
HGVS:: NC_000023.11:g.66037535dup, NC_000023.10:g.65257377dup, NG_021306.1:g.7591dup

Select item 149121317613.

rs1491213176 has merged into rs1217768220 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATAT>-,AT,ATATAT [Show Flanks]
Chromosome:: X:66036721 (GRCh38)
X:65256563 (GRCh37)
Canonical SPDI:: NC_000023.11:66036714:ATATATATAT:ATATAT,NC_000023.11:66036714:ATATATATAT:ATATATAT,NC_000023.11:66036714:ATATATATAT:ATATATATATAT
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATAT=0./0 (ALFA)
-=0.000015/4 (TOPMED)
-=0.000186/2 (TOMMO)
HGVS:: NC_000023.11:g.66036715AT[3], NC_000023.11:g.66036715AT[4], NC_000023.11:g.66036715AT[6], NC_000023.10:g.65256557AT[3], NC_000023.10:g.65256557AT[4], NC_000023.10:g.65256557AT[6], NG_021306.1:g.8402AT[3], NG_021306.1:g.8402AT[4], NG_021306.1:g.8402AT[6]

Select item 149117314614.

rs1491173146 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: X:66037534 (GRCh38)
X:65257376 (GRCh37)
Canonical SPDI:: NC_000023.11:66037533:CA:
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000023.11:g.66037534_66037535del, NC_000023.10:g.65257376_65257377del, NG_021306.1:g.7591_7592del

Select item 149094597715.

rs1490945977 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:66034180 (GRCh38)
X:65254022 (GRCh37)
Canonical SPDI:: NC_000023.11:66034179:C:T
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000054/1 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000058/6 (GnomAD)
HGVS:: NC_000023.11:g.66034180C>T, NC_000023.10:g.65254022C>T, NG_021306.1:g.10946G>A

Select item 149057791116.

rs1490577911 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: X:66022123 (GRCh38)
X:65241965 (GRCh37)
Canonical SPDI:: NC_000023.11:66022122:A:G,NC_000023.11:66022122:A:T
Gene:: VSIG4 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000015/2 (GnomAD_exomes)
HGVS:: NC_000023.11:g.66022123A>G, NC_000023.11:g.66022123A>T, NC_000023.10:g.65241965A>G, NC_000023.10:g.65241965A>T, NG_021306.1:g.23003T>C, NG_021306.1:g.23003T>A, NM_007268.3:c.*140T>C, NM_007268.3:c.*140T>A, NM_007268.2:c.*140T>C, NM_007268.2:c.*140T>A, NM_001184830.2:c.*714T>C, NM_001184830.2:c.*714T>A, NM_001184830.1:c.*714T>C, NM_001184830.1:c.*714T>A, NM_001184831.2:c.*714T>C, NM_001184831.2:c.*714T>A, NM_001184831.1:c.*714T>C, NM_001184831.1:c.*714T>A, NM_001100431.2:c.*140T>C, NM_001100431.2:c.*140T>A, NM_001100431.1:c.*140T>C, NM_001100431.1:c.*140T>A, NM_001257403.2:c.1006T>C, NM_001257403.2:c.1006T>A, NM_001257403.1:c.1006T>C, NM_001257403.1:c.1006T>A, NP_001244332.1:p.Trp336Arg, NP_001244332.1:p.Trp336Arg

Select item 149044259617.

rs1490442596 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:66029876 (GRCh38)
X:65249718 (GRCh37)
Canonical SPDI:: NC_000023.11:66029875:G:A
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.66029876G>A, NC_000023.10:g.65249718G>A, NG_021306.1:g.15250C>T

Select item 149032280418.

rs1490322804 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:66022715 (GRCh38)
X:65242557 (GRCh37)
Canonical SPDI:: NC_000023.11:66022714:G:A
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.66022715G>A, NC_000023.10:g.65242557G>A, NG_021306.1:g.22411C>T, NM_001184830.2:c.*122C>T, NM_001184830.1:c.*122C>T, NM_001184831.2:c.*122C>T, NM_001184831.1:c.*122C>T

Select item 149026433619.

rs1490264336 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:66037463 (GRCh38)
X:65257305 (GRCh37)
Canonical SPDI:: NC_000023.11:66037462:T:C
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000023.11:g.66037463T>C, NC_000023.10:g.65257305T>C, NG_021306.1:g.7663A>G

Select item 149022886220.

rs1490228862 [Homo sapiens]

Variant type:: DEL
Alleles:: T>- [Show Flanks]
Chromosome:: X:66037177 (GRCh38)
X:65257019 (GRCh37)
Canonical SPDI:: NC_000023.11:66037176:T:
Gene:: VSIG4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000023.11:g.66037177del, NC_000023.10:g.65257019del, NG_021306.1:g.7949del