SNP Links for Gene (Select 115265) - SNP

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Select item 14898716221.

rs1489871622 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:100186078 (GRCh38)
4:101107235 (GRCh37)
Canonical SPDI:: NC_000004.12:100186077:C:T
Gene:: DDIT4L (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency
MAF:: T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.100186078C>T, NC_000004.11:g.101107235C>T, NM_145244.4:c.*1599G>A, NM_145244.3:c.*1599G>A

Select item 14895315192.

rs1489531519 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 4:100190538 (GRCh38)
4:101111695 (GRCh37)
Canonical SPDI:: NC_000004.12:100190537:G:A,NC_000004.12:100190537:G:C
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00008/1 (ALFA)
C=0.00032/5 (TOMMO)
HGVS:: NC_000004.12:g.100190538G>A, NC_000004.12:g.100190538G>C, NC_000004.11:g.101111695G>A, NC_000004.11:g.101111695G>C

Select item 14892260673.

rs1489226067 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:100189961 (GRCh38)
4:101111118 (GRCh37)
Canonical SPDI:: NC_000004.12:100189960:C:T
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: missense_variant,upstream_transcript_variant,coding_sequence_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.100189961C>T, NC_000004.11:g.101111118C>T, NM_145244.4:c.23G>A, NM_145244.3:c.23G>A, NP_660287.1:p.Ser8Asn

Select item 14890827924.

rs1489082792 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:100187690 (GRCh38)
4:101108847 (GRCh37)
Canonical SPDI:: NC_000004.12:100187689:A:G
Gene:: DDIT4L (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.100187690A>G, NC_000004.11:g.101108847A>G, NM_145244.4:c.569T>C, NM_145244.3:c.569T>C, NP_660287.1:p.Ile190Thr

Select item 14889128195.

rs1488912819 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 4:100191647 (GRCh38)
4:101112804 (GRCh37)
Canonical SPDI:: NC_000004.12:100191646:C:A
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000004.12:g.100191647C>A, NC_000004.11:g.101112804C>A

Select item 14888173566.

rs1488817356 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATT>- [Show Flanks]
Chromosome:: 4:100185890 (GRCh38)
4:101107047 (GRCh37)
Canonical SPDI:: NC_000004.12:100185887:TTATT:TT
Gene:: DDIT4L (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.100185890_100185892del, NC_000004.11:g.101107047_101107049del, NM_145244.4:c.*1787_*1789del, NM_145244.3:c.*1787_*1789del

Select item 14885638227.

rs1488563822 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 4:100190217 (GRCh38)
4:101111374 (GRCh37)
Canonical SPDI:: NC_000004.12:100190216:C:A,NC_000004.12:100190216:C:G
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000004.12:g.100190217C>A, NC_000004.12:g.100190217C>G, NC_000004.11:g.101111374C>A, NC_000004.11:g.101111374C>G

Select item 14880350428.

rs1488035042 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:100188445 (GRCh38)
4:101109602 (GRCh37)
Canonical SPDI:: NC_000004.12:100188444:A:G
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.100188445A>G, NC_000004.11:g.101109602A>G

Select item 14879234369.

rs1487923436 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 4:100192198 (GRCh38)
4:101113355 (GRCh37)
Canonical SPDI:: NC_000004.12:100192197:C:G,NC_000004.12:100192197:C:T
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.100192198C>G, NC_000004.12:g.100192198C>T, NC_000004.11:g.101113355C>G, NC_000004.11:g.101113355C>T

Select item 148789382110.

rs1487893821 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 4:100191063 (GRCh38)
4:101112220 (GRCh37)
Canonical SPDI:: NC_000004.12:100191062:T:A
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.100191063T>A, NC_000004.11:g.101112220T>A

Select item 148737425611.

rs1487374256 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 4:100190786 (GRCh38)
4:101111943 (GRCh37)
Canonical SPDI:: NC_000004.12:100190785:C:A
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000224/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000223/1 (Estonian)
HGVS:: NC_000004.12:g.100190786C>A, NC_000004.11:g.101111943C>A

Select item 148657118412.

rs1486571184 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:100189345 (GRCh38)
4:101110502 (GRCh37)
Canonical SPDI:: NC_000004.12:100189344:T:C
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.100189345T>C, NC_000004.11:g.101110502T>C

Select item 148634882113.

rs1486348821 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 4:100188299 (GRCh38)
4:101109456 (GRCh37)
Canonical SPDI:: NC_000004.12:100188298:G:A,NC_000004.12:100188298:G:T
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.100188299G>A, NC_000004.12:g.100188299G>T, NC_000004.11:g.101109456G>A, NC_000004.11:g.101109456G>T

Select item 148626116114.

rs1486261161 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:100189717 (GRCh38)
4:101110874 (GRCh37)
Canonical SPDI:: NC_000004.12:100189716:C:T
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000029/4 (GnomAD)
HGVS:: NC_000004.12:g.100189717C>T, NC_000004.11:g.101110874C>T

Select item 148560173015.

rs1485601730 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:100186002 (GRCh38)
4:101107159 (GRCh37)
Canonical SPDI:: NC_000004.12:100186001:T:C
Gene:: DDIT4L (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.100186002T>C, NC_000004.11:g.101107159T>C, NM_145244.4:c.*1675A>G, NM_145244.3:c.*1675A>G

Select item 148540782916.

rs1485407829 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:100188514 (GRCh38)
4:101109671 (GRCh37)
Canonical SPDI:: NC_000004.12:100188513:T:C
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.100188514T>C, NC_000004.11:g.101109671T>C

Select item 148530321517.

rs1485303215 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:100189187 (GRCh38)
4:101110344 (GRCh37)
Canonical SPDI:: NC_000004.12:100189186:C:T
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000156/1 (1000Genomes)
HGVS:: NC_000004.12:g.100189187C>T, NC_000004.11:g.101110344C>T

Select item 148440340918.

rs1484403409 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:100189317 (GRCh38)
4:101110474 (GRCh37)
Canonical SPDI:: NC_000004.12:100189316:A:G
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.100189317A>G, NC_000004.11:g.101110474A>G

Select item 148418364719.

rs1484183647 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 4:100185779 (GRCh38)
4:101106936 (GRCh37)
Canonical SPDI:: NC_000004.12:100185778:C:A
Gene:: DDIT4L (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.100185779C>A, NC_000004.11:g.101106936C>A

Select item 148410233520.

rs1484102335 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 4:100190398 (GRCh38)
4:101111555 (GRCh37)
Canonical SPDI:: NC_000004.12:100190397:G:C
Gene:: DDIT4L (Varview), DDIT4L-AS1 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000023/6 (TOPMED)
HGVS:: NC_000004.12:g.100190398G>C, NC_000004.11:g.101111555G>C, NM_145244.4:c.-145C>G, NM_145244.3:c.-145C>G

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