SNP Links for Gene (Select 116123) - SNP

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Items: 1 to 20 of 5444

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Select item 14909279131.

rs1490927913 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 1:166614977 (GRCh38)
1:166584214 (GRCh37)
Canonical SPDI:: NC_000001.11:166614976:T:A,NC_000001.11:166614976:T:C
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.166614977T>A, NC_000001.11:g.166614977T>C, NC_000001.10:g.166584214T>A, NC_000001.10:g.166584214T>C

Select item 14907612692.

rs1490761269 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:166623615 (GRCh38)
1:166592852 (GRCh37)
Canonical SPDI:: NC_000001.11:166623614:T:C
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000018/2 (GnomAD_exomes)
C=0.000042/11 (TOPMED)
HGVS:: NC_000001.11:g.166623615T>C, NC_000001.10:g.166592852T>C

Select item 14905318323.

rs1490531832 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:166603366 (GRCh38)
1:166572603 (GRCh37)
Canonical SPDI:: NC_000001.11:166603365:T:C
Gene:: FMO9P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.166603366T>C, NC_000001.10:g.166572603T>C

Select item 14902213044.

rs1490221304 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:166620918 (GRCh38)
1:166590155 (GRCh37)
Canonical SPDI:: NC_000001.11:166620917:C:T
Gene:: FMO9P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.166620918C>T, NC_000001.10:g.166590155C>T, NR_002925.2:n.431C>T, NM_138784.1:c.102C>T

Select item 14902210555.

rs1490221055 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:166618835 (GRCh38)
1:166588072 (GRCh37)
Canonical SPDI:: NC_000001.11:166618834:C:T
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.166618835C>T, NC_000001.10:g.166588072C>T

Select item 14901108486.

rs1490110848 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:166613904 (GRCh38)
1:166583141 (GRCh37)
Canonical SPDI:: NC_000001.11:166613903:T:G
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.166613904T>G, NC_000001.10:g.166583141T>G

Select item 14899880727.

rs1489988072 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:166618401 (GRCh38)
1:166587638 (GRCh37)
Canonical SPDI:: NC_000001.11:166618400:A:G
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000023/6 (TOPMED)
G=0.000043/6 (GnomAD)
HGVS:: NC_000001.11:g.166618401A>G, NC_000001.10:g.166587638A>G

Select item 14899636488.

rs1489963648 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:166615211 (GRCh38)
1:166584448 (GRCh37)
Canonical SPDI:: NC_000001.11:166615210:A:C
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.166615211A>C, NC_000001.10:g.166584448A>C

Select item 14899497409.

rs1489949740 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:166612644 (GRCh38)
1:166581881 (GRCh37)
Canonical SPDI:: NC_000001.11:166612643:A:T
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000015/2 (GnomAD)
HGVS:: NC_000001.11:g.166612644A>T, NC_000001.10:g.166581881A>T

Select item 148977750010.

rs1489777500 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 1:166619609 (GRCh38)
1:166588846 (GRCh37)
Canonical SPDI:: NC_000001.11:166619608:A:G,NC_000001.11:166619608:A:T
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00013/2 (ALFA)
T=0.00045/2 (Estonian)
HGVS:: NC_000001.11:g.166619609A>G, NC_000001.11:g.166619609A>T, NC_000001.10:g.166588846A>G, NC_000001.10:g.166588846A>T

Select item 148878570611.

rs1488785706 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:166611212 (GRCh38)
1:166580449 (GRCh37)
Canonical SPDI:: NC_000001.11:166611211:G:A
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.166611212G>A, NC_000001.10:g.166580449G>A

Select item 148876808312.

rs1488768083 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:166618974 (GRCh38)
1:166588211 (GRCh37)
Canonical SPDI:: NC_000001.11:166618973:T:A
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000036/5 (GnomAD)
A=0.000049/13 (TOPMED)
HGVS:: NC_000001.11:g.166618974T>A, NC_000001.10:g.166588211T>A

Select item 148835851513.

rs1488358515 has merged into rs1187784422 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>-,TT [Show Flanks]
Chromosome:: 1:166619327 (GRCh38)
1:166588564 (GRCh37)
Canonical SPDI:: NC_000001.11:166619326:TTTTT:TTTT,NC_000001.11:166619326:TTTTT:TTTTTT
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTT=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.166619331del, NC_000001.11:g.166619331dup, NC_000001.10:g.166588568del, NC_000001.10:g.166588568dup

Select item 148835850814.

rs1488358508 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:166605206 (GRCh38)
1:166574443 (GRCh37)
Canonical SPDI:: NC_000001.11:166605205:G:A
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.166605206G>A, NC_000001.10:g.166574443G>A

Select item 148833156115.

rs1488331561 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:166602900 (GRCh38)
1:166572137 (GRCh37)
Canonical SPDI:: NC_000001.11:166602899:G:A
Gene:: FMO9P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: A=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.166602900G>A, NC_000001.10:g.166572137G>A

Select item 148812384616.

rs1488123846 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:166614123 (GRCh38)
1:166583360 (GRCh37)
Canonical SPDI:: NC_000001.11:166614122:C:T
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.166614123C>T, NC_000001.10:g.166583360C>T

Select item 148807373517.

rs1488073735 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:166612937 (GRCh38)
1:166582174 (GRCh37)
Canonical SPDI:: NC_000001.11:166612936:T:A
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.166612937T>A, NC_000001.10:g.166582174T>A

Select item 148781664018.

rs1487816640 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTA>- [Show Flanks]
Chromosome:: 1:166617675 (GRCh38)
1:166586912 (GRCh37)
Canonical SPDI:: NC_000001.11:166617671:TTATTA:TTA
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTATTA=0.000142/2 (ALFA)
-=0.000014/2 (GnomAD)
-=0.000023/6 (TOPMED)
HGVS:: NC_000001.11:g.166617672TTA[1], NC_000001.10:g.166586909TTA[1]

Select item 148773410119.

rs1487734101 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:166620327 (GRCh38)
1:166589564 (GRCh37)
Canonical SPDI:: NC_000001.11:166620326:T:G
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.166620327T>G, NC_000001.10:g.166589564T>G

Select item 148769783120.

rs1487697831 [Homo sapiens]

Variant type:: INS
Alleles:: ->CGAGACA [Show Flanks]
Chromosome:: 1:166605824 (GRCh38)
1:166575062 (GRCh37)
Canonical SPDI:: NC_000001.11:166605824::CGAGACA
Gene:: FMO9P (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CGAGACA=0./0 (ALFA)
CGAGACA=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.166605824_166605825insCGAGACA, NC_000001.10:g.166575061_166575062insCGAGACA

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