SNP Links for Gene (Select 118670) - SNP

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Select item 14908847971.

rs1490884797 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:122911567 (GRCh38)
10:124671083 (GRCh37)
Canonical SPDI:: NC_000010.11:122911566:G:A
Gene:: FAM24A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000010.11:g.122911567G>A, NC_000010.10:g.124671083G>A

Select item 14904459712.

rs1490445971 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:122912633 (GRCh38)
10:124672149 (GRCh37)
Canonical SPDI:: NC_000010.11:122912632:C:T
Gene:: FAM24A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000010.11:g.122912633C>T, NC_000010.10:g.124672149C>T

Select item 14891454093.

rs1489145409 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 10:122912804 (GRCh38)
10:124672320 (GRCh37)
Canonical SPDI:: NC_000010.11:122912803:C:G
Gene:: FAM24A (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000016/4 (GnomAD_exomes)
HGVS:: NC_000010.11:g.122912804C>G, NC_000010.10:g.124672320C>G, NM_001029888.3:c.168C>G, NM_001029888.2:c.168C>G, NM_001029888.1:c.168C>G, XM_017015639.2:c.168C>G, XM_017015639.1:c.168C>G, XM_017015638.2:c.168C>G, XM_017015638.1:c.168C>G, NP_001025059.1:p.Asn56Lys, XP_016871128.1:p.Asn56Lys, XP_016871127.1:p.Asn56Lys

Select item 14887096834.

rs1488709683 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:122910484 (GRCh38)
10:124670000 (GRCh37)
Canonical SPDI:: NC_000010.11:122910483:A:G
Gene:: FAM24A (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000019/5 (TOPMED)
HGVS:: NC_000010.11:g.122910484A>G, NC_000010.10:g.124670000A>G

Select item 14882997325.

rs1488299732 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:122913140 (GRCh38)
10:124672656 (GRCh37)
Canonical SPDI:: NC_000010.11:122913139:A:G
Gene:: FAM24A (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.122913140A>G, NC_000010.10:g.124672656A>G

Select item 14879527196.

rs1487952719 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:122911814 (GRCh38)
10:124671330 (GRCh37)
Canonical SPDI:: NC_000010.11:122911813:C:T
Gene:: FAM24A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000010.11:g.122911814C>T, NC_000010.10:g.124671330C>T, NG_063701.1:g.22C>T

Select item 14876234737.

rs1487623473 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:122910727 (GRCh38)
10:124670243 (GRCh37)
Canonical SPDI:: NC_000010.11:122910726:A:G
Gene:: FAM24A (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000010.11:g.122910727A>G, NC_000010.10:g.124670243A>G, NM_001029888.3:c.-95A>G, NM_001029888.2:c.-95A>G, NM_001029888.1:c.-95A>G

Select item 14870979588.

rs1487097958 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CC [Show Flanks]
Chromosome:: 10:122912161 (GRCh38)
10:124671678 (GRCh37)
Canonical SPDI:: NC_000010.11:122912161:CC:CCCC
Gene:: FAM24A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCC=0./0 (ALFA)
CC=0.000008/2 (TOPMED)
CC=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.122912162_122912163dup, NC_000010.10:g.124671678_124671679dup, NG_063701.1:g.370_371dup

Select item 14870754489.

rs1487075448 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:122911090 (GRCh38)
10:124670606 (GRCh37)
Canonical SPDI:: NC_000010.11:122911089:G:A
Gene:: FAM24A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.122911090G>A, NC_000010.10:g.124670606G>A

Select item 148565567210.

rs1485655672 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:122909320 (GRCh38)
10:124668836 (GRCh37)
Canonical SPDI:: NC_000010.11:122909319:T:C
Gene:: FAM24A (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.122909320T>C, NC_000010.10:g.124668836T>C

Select item 148544441811.

rs1485444418 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:122909341 (GRCh38)
10:124668857 (GRCh37)
Canonical SPDI:: NC_000010.11:122909340:G:A
Gene:: FAM24A (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000010.11:g.122909341G>A, NC_000010.10:g.124668857G>A

Select item 148469030812.

rs1484690308 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 10:122909783 (GRCh38)
10:124669299 (GRCh37)
Canonical SPDI:: NC_000010.11:122909782:C:G,NC_000010.11:122909782:C:T
Gene:: FAM24A (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000010.11:g.122909783C>G, NC_000010.11:g.122909783C>T, NC_000010.10:g.124669299C>G, NC_000010.10:g.124669299C>T

Select item 148071897613.

rs1480718976 [Homo sapiens]

Variant type:: INS
Alleles:: ->GG [Show Flanks]
Chromosome:: 10:122909047 (GRCh38)
10:124668564 (GRCh37)
Canonical SPDI:: NC_000010.11:122909047::GG
Gene:: FAM24A (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: GG=0.000078/11 (GnomAD)
HGVS:: NC_000010.11:g.122909047_122909048insGG, NC_000010.10:g.124668563_124668564insGG

Select item 148071457614.

rs1480714576 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:122913164 (GRCh38)
10:124672680 (GRCh37)
Canonical SPDI:: NC_000010.11:122913163:T:C
Gene:: FAM24A (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.122913164T>C, NC_000010.10:g.124672680T>C

Select item 148066408315.

rs1480664083 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:122911931 (GRCh38)
10:124671447 (GRCh37)
Canonical SPDI:: NC_000010.11:122911930:C:T
Gene:: FAM24A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000546/1 (Korea1K)
HGVS:: NC_000010.11:g.122911931C>T, NC_000010.10:g.124671447C>T, NG_063701.1:g.139C>T

Select item 148065528916.

rs1480655289 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:122911866 (GRCh38)
10:124671382 (GRCh37)
Canonical SPDI:: NC_000010.11:122911865:T:C
Gene:: FAM24A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000079/11 (GnomAD)
C=0.001667/1 (NorthernSweden)
HGVS:: NC_000010.11:g.122911866T>C, NC_000010.10:g.124671382T>C, NG_063701.1:g.74T>C

Select item 147955555217.

rs1479555552 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:122910031 (GRCh38)
10:124669547 (GRCh37)
Canonical SPDI:: NC_000010.11:122910030:T:C
Gene:: FAM24A (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000010.11:g.122910031T>C, NC_000010.10:g.124669547T>C

Select item 147855199218.

rs1478551992 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 10:122908699 (GRCh38)
10:124668215 (GRCh37)
Canonical SPDI:: NC_000010.11:122908698:T:G
Gene:: FAM24A (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
HGVS:: NC_000010.11:g.122908699T>G, NC_000010.10:g.124668215T>G

Select item 147827198519.

rs1478271985 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:122910617 (GRCh38)
10:124670133 (GRCh37)
Canonical SPDI:: NC_000010.11:122910616:C:T
Gene:: FAM24A (Varview)
Functional Consequence:: 5_prime_UTR_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000010.11:g.122910617C>T, NC_000010.10:g.124670133C>T, NM_001029888.3:c.-205C>T, XM_017015639.2:c.-107C>T, XM_017015639.1:c.-107C>T

Select item 147712598020.

rs1477125980 [Homo sapiens]

Variant type:: SNV:
Alleles:: C>T
Chromosome:: no mapping
Canonical SPDI:

dbSNP

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