SNP Links for Gene (Select 119180) - SNP

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Select item 14915756061.

rs1491575606 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AAGAAAGGAAGA,AAGGAAGA,AGA [Show Flanks]
Chromosome:: 10:30611612 (GRCh38)
10:30900542 (GRCh37)
Canonical SPDI:: NC_000010.11:30611612:AAGA:AAGAAAGAAAGGAAGA,NC_000010.11:30611612:AAGA:AAGAAAGGAAGA,NC_000010.11:30611612:AAGA:AAGAAGA
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAGAAGA=0./0 (ALFA)
AAGAAAGG=0./0 (GnomAD)
AAG=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.30611613_30611616AAGA[2]AAGGAAGA[1], NC_000010.11:g.30611616_30611617insAAGGAAGA, NC_000010.11:g.30611614_30611616dup, NC_000010.10:g.30900542_30900545AAGA[2]AAGGAAGA[1], NC_000010.10:g.30900545_30900546insAAGGAAGA, NC_000010.10:g.30900543_30900545dup

Select item 14915563662.

rs1491556366 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 10:30617674 (GRCh38)
10:30906603 (GRCh37)
Canonical SPDI:: NC_000010.11:30617673:CA:
Gene:: LYZL2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00017/2 (ALFA)
HGVS:: NC_000010.11:g.30617674_30617675del, NC_000010.10:g.30906603_30906604del

Select item 14915227273.

rs1491522727 [Homo sapiens]

Variant type:: DEL
Alleles:: GG>- [Show Flanks]
Chromosome:: 10:30611562 (GRCh38)
10:30900491 (GRCh37)
Canonical SPDI:: NC_000010.11:30611561:GG:
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: -=0.01732/1468 (GnomAD)
-=0.03496/574 (TOMMO)
-=0.04436/81 (Korea1K)
HGVS:: NC_000010.11:g.30611562_30611563del, NC_000010.10:g.30900491_30900492del

Select item 14914863234.

rs1491486323 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 10:30611703 (GRCh38)
10:30900633 (GRCh37)
Canonical SPDI:: NC_000010.11:30611703::G
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000010.11:g.30611703_30611704insG, NC_000010.10:g.30900632_30900633insG

Select item 14914656155.

rs1491465615 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AGAA,AGAAAGAA,AGAAAGAAAGAA [Show Flanks]
Chromosome:: 10:30611558 (GRCh38)
10:30900488 (GRCh37)
Canonical SPDI:: NC_000010.11:30611558:GAA:GAAAGAA,NC_000010.11:30611558:GAA:GAAAGAAAGAA,NC_000010.11:30611558:GAA:GAAAGAAAGAAAGAA
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: GAAAGAAAGAA=0./0 (ALFA)
HGVS:: NC_000010.11:g.30611561_30611562insAGAA, NC_000010.11:g.30611561_30611562insAGAAAGAA, NC_000010.11:g.30611562AGAA[3], NC_000010.10:g.30900490_30900491insAGAA, NC_000010.10:g.30900490_30900491insAGAAAGAA, NC_000010.10:g.30900491AGAA[3]

Select item 14914590706.

rs1491459070 [Homo sapiens]

Variant type:: DEL
Alleles:: GG>- [Show Flanks]
Chromosome:: 10:30611570 (GRCh38)
10:30900499 (GRCh37)
Canonical SPDI:: NC_000010.11:30611569:GG:
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00025/3 (ALFA)
HGVS:: NC_000010.11:g.30611570_30611571del, NC_000010.10:g.30900499_30900500del

Select item 14914562647.

rs1491456264 [Homo sapiens]

Variant type:: DEL
Alleles:: GG>- [Show Flanks]
Chromosome:: 10:30611554 (GRCh38)
10:30900483 (GRCh37)
Canonical SPDI:: NC_000010.11:30611553:GG:
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: -=0.00014/2 (TOMMO)
-=0.01232/1081 (GnomAD)
HGVS:: NC_000010.11:g.30611554_30611555del, NC_000010.10:g.30900483_30900484del

Select item 14914455068.

rs1491445506 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->GAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAA
Chromosome:: no mapping
Canonical SPDI:

Select item 14913687299.

rs1491368729 [Homo sapiens]

Variant type:: DEL
Alleles:: GG>- [Show Flanks]
Chromosome:: 10:30611566 (GRCh38)
10:30900495 (GRCh37)
Canonical SPDI:: NC_000010.11:30611565:GG:
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.00654/108 (TOMMO)
-=0.01022/826 (GnomAD)
-=0.01347/8 (NorthernSweden)
-=0.01868/34 (Korea1K)
HGVS:: NC_000010.11:g.30611566_30611567del, NC_000010.10:g.30900495_30900496del

Select item 149134931010.

rs1491349310 has merged into rs1165550893 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAAAAA>-,AAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 10:30617681 (GRCh38)
10:30906610 (GRCh37)
Canonical SPDI:: NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:30617674:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: LYZL2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAA=0./0 (ALFA)
HGVS:: NC_000010.11:g.30617681_30617698del, NC_000010.11:g.30617685_30617698del, NC_000010.11:g.30617687_30617698del, NC_000010.11:g.30617688_30617698del, NC_000010.11:g.30617689_30617698del, NC_000010.11:g.30617690_30617698del, NC_000010.11:g.30617691_30617698del, NC_000010.11:g.30617692_30617698del, NC_000010.11:g.30617693_30617698del, NC_000010.11:g.30617694_30617698del, NC_000010.11:g.30617695_30617698del, NC_000010.11:g.30617696_30617698del, NC_000010.11:g.30617697_30617698del, NC_000010.11:g.30617698del, NC_000010.11:g.30617698dup, NC_000010.11:g.30617697_30617698dup, NC_000010.11:g.30617696_30617698dup, NC_000010.11:g.30617695_30617698dup, NC_000010.11:g.30617694_30617698dup, NC_000010.11:g.30617693_30617698dup, NC_000010.11:g.30617690_30617698dup, NC_000010.11:g.30617689_30617698dup, NC_000010.11:g.30617688_30617698dup, NC_000010.11:g.30617685_30617698dup, NC_000010.11:g.30617684_30617698dup, NC_000010.11:g.30617683_30617698dup, NC_000010.11:g.30617682_30617698dup, NC_000010.11:g.30617681_30617698dup, NC_000010.11:g.30617680_30617698dup, NC_000010.11:g.30617679_30617698dup, NC_000010.11:g.30617678_30617698dup, NC_000010.11:g.30617677_30617698dup, NC_000010.11:g.30617676_30617698dup, NC_000010.11:g.30617675_30617698dup, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617698_30617699insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.30617675_30617698A[36]GAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000010.11:g.30617675_30617698A[25]GAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000010.10:g.30906610_30906627del, NC_000010.10:g.30906614_30906627del, NC_000010.10:g.30906616_30906627del, NC_000010.10:g.30906617_30906627del, NC_000010.10:g.30906618_30906627del, NC_000010.10:g.30906619_30906627del, NC_000010.10:g.30906620_30906627del, NC_000010.10:g.30906621_30906627del, NC_000010.10:g.30906622_30906627del, NC_000010.10:g.30906623_30906627del, NC_000010.10:g.30906624_30906627del, NC_000010.10:g.30906625_30906627del, NC_000010.10:g.30906626_30906627del, NC_000010.10:g.30906627del, NC_000010.10:g.30906627dup, NC_000010.10:g.30906626_30906627dup, NC_000010.10:g.30906625_30906627dup, NC_000010.10:g.30906624_30906627dup, NC_000010.10:g.30906623_30906627dup, NC_000010.10:g.30906622_30906627dup, NC_000010.10:g.30906619_30906627dup, NC_000010.10:g.30906618_30906627dup, NC_000010.10:g.30906617_30906627dup, NC_000010.10:g.30906614_30906627dup, NC_000010.10:g.30906613_30906627dup, NC_000010.10:g.30906612_30906627dup, NC_000010.10:g.30906611_30906627dup, NC_000010.10:g.30906610_30906627dup, NC_000010.10:g.30906609_30906627dup, NC_000010.10:g.30906608_30906627dup, NC_000010.10:g.30906607_30906627dup, NC_000010.10:g.30906606_30906627dup, NC_000010.10:g.30906605_30906627dup, NC_000010.10:g.30906604_30906627dup, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906627_30906628insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.30906604_30906627A[36]GAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000010.10:g.30906604_30906627A[25]GAAAAAAAAAAAAAAAAAAAAAAAA[1]

Select item 149134487011.

rs1491344870 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GGAAAGAA,GGAAAGAAAGAA,GGAAAGAAAGAAAGAA,GGAAAGAAAGAAAGAAAGAA,GGAAAGAAAGAAAGAAAGAAAGAA,GGAAAGAAAGAAAGAAAGAAAGAAAGAA,GGAAGGAAAGAA,GGAAGGAAAGAAAGAA,GGAAGGAAAGAAAGAAAGAA,GGAAGGAAAGAAAGAAAGAAAGAA,GGAAGGAAAGAAAGAAAGAAAGAAAGAA,GGAAGGAAGGAAAGAA,GGAAGGAAGGAAAGAAAGAA,GGAAGGAAGGAAAGAAAGAAAGAA,GGAAGGAAGGAAAGAAAGAAAGAAAGAA,GGAAGGAAGGAAGGAAAGAA,GGAAGGAAGGAAGGAAAGAAAGAA,GGAAGGAAGGAAGGAAAGAAAGAAAGAA,GGAAGGAAGGAAGGAAGGAAAGAA,GGAAGGAAGGAAGGAAGGAAAGAAAGAA,GGAAGGAAGGAAGGAAGGAAGGAAAGAA,TGAA [Show Flanks]
Chromosome:: 10:30611570 (GRCh38)
10:30900500 (GRCh37)
Canonical SPDI:: NC_000010.11:30611570:GAA:GAAGGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAAGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAAGAAAGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAAGAAAGAAAGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAAGAAAGAAAGAAAGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAAGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAAGAAAGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAAGAAAGAAAGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAGGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAGGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAGGAAAGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAGGAAAGAAAGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAGGAAGGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAGGAAGGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAGGAAGGAAAGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAGGAAGGAAGGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAGGAAGGAAGGAAAGAAAGAA,NC_000010.11:30611570:GAA:GAAGGAAGGAAGGAAGGAAGGAAGGAAAGAA,NC_000010.11:30611570:GAA:GAATGAA
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAAGGAAAGAAAGAAAGAA=0./0 (ALFA)
GAAT=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.30611573_30611574insGGAAAGAA, NC_000010.11:g.30611573_30611574insGGAAAGAAAGAA, NC_000010.11:g.30611573_30611574insGGAAAGAAAGAAAGAA, NC_000010.11:g.30611573_30611574insGGAAAGAAAGAAAGAAAGAA, NC_000010.11:g.30611573_30611574insGGAAAGAAAGAAAGAAAGAAAGAA, NC_000010.11:g.30611573_30611574insGGAAAGAAAGAAAGAAAGAAAGAAAGAA, NC_000010.11:g.30611571_30611573GAAG[2]GAAAGAA[1], NC_000010.11:g.30611571_30611573GAAG[2]GAAA[2]GAA[1], NC_000010.11:g.30611571_30611573GAAG[2]GAAA[3]GAA[1], NC_000010.11:g.30611571_30611573GAAG[2]GAAA[4]GAA[1], NC_000010.11:g.30611571_30611573GAAG[2]GAAA[5]GAA[1], NC_000010.11:g.30611571_30611573GAAG[3]GAAAGAA[1], NC_000010.11:g.30611571_30611573GAAG[3]GAAA[2]GAA[1], NC_000010.11:g.30611571_30611573GAAG[3]GAAA[3]GAA[1], NC_000010.11:g.30611571_30611573GAAG[3]GAAA[4]GAA[1], NC_000010.11:g.30611571_30611573GAAG[4]GAAAGAA[1], NC_000010.11:g.30611571_30611573GAAG[4]GAAA[2]GAA[1], NC_000010.11:g.30611571_30611573GAAG[4]GAAA[3]GAA[1], NC_000010.11:g.30611571_30611573GAAG[5]GAAAGAA[1], NC_000010.11:g.30611571_30611573GAAG[5]GAAA[2]GAA[1], NC_000010.11:g.30611571_30611573GAAG[6]GAAAGAA[1], NC_000010.11:g.30611573_30611574insTGAA, NC_000010.10:g.30900502_30900503insGGAAAGAA, NC_000010.10:g.30900502_30900503insGGAAAGAAAGAA, NC_000010.10:g.30900502_30900503insGGAAAGAAAGAAAGAA, NC_000010.10:g.30900502_30900503insGGAAAGAAAGAAAGAAAGAA, NC_000010.10:g.30900502_30900503insGGAAAGAAAGAAAGAAAGAAAGAA, NC_000010.10:g.30900502_30900503insGGAAAGAAAGAAAGAAAGAAAGAAAGAA, NC_000010.10:g.30900500_30900502GAAG[2]GAAAGAA[1], NC_000010.10:g.30900500_30900502GAAG[2]GAAA[2]GAA[1], NC_000010.10:g.30900500_30900502GAAG[2]GAAA[3]GAA[1], NC_000010.10:g.30900500_30900502GAAG[2]GAAA[4]GAA[1], NC_000010.10:g.30900500_30900502GAAG[2]GAAA[5]GAA[1], NC_000010.10:g.30900500_30900502GAAG[3]GAAAGAA[1], NC_000010.10:g.30900500_30900502GAAG[3]GAAA[2]GAA[1], NC_000010.10:g.30900500_30900502GAAG[3]GAAA[3]GAA[1], NC_000010.10:g.30900500_30900502GAAG[3]GAAA[4]GAA[1], NC_000010.10:g.30900500_30900502GAAG[4]GAAAGAA[1], NC_000010.10:g.30900500_30900502GAAG[4]GAAA[2]GAA[1], NC_000010.10:g.30900500_30900502GAAG[4]GAAA[3]GAA[1], NC_000010.10:g.30900500_30900502GAAG[5]GAAAGAA[1], NC_000010.10:g.30900500_30900502GAAG[5]GAAA[2]GAA[1], NC_000010.10:g.30900500_30900502GAAG[6]GAAAGAA[1], NC_000010.10:g.30900502_30900503insTGAA

Select item 149133723412.

rs1491337234 has merged into rs58337423 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAA>-,AA,AAA [Show Flanks]
Chromosome:: 10:30611702 (GRCh38)
10:30900631 (GRCh37)
Canonical SPDI:: NC_000010.11:30611700:AAAAA:A,NC_000010.11:30611700:AAAAA:AAA,NC_000010.11:30611700:AAAAA:AAAA
Gene:: LYZL2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAA=0./0 (ALFA)
-=0.00011/7 (GnomAD)
-=0.08796/339 (ALSPAC)
HGVS:: NC_000010.11:g.30611702_30611705del, NC_000010.11:g.30611704_30611705del, NC_000010.11:g.30611705del, NC_000010.10:g.30900631_30900634del, NC_000010.10:g.30900633_30900634del, NC_000010.10:g.30900634del

Select item 149130105213.

rs1491301052 [Homo sapiens]

Variant type:: DEL
Alleles:: GG>- [Show Flanks]
Chromosome:: 10:30611558 (GRCh38)
10:30900487 (GRCh37)
Canonical SPDI:: NC_000010.11:30611557:GG:
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: -=0.03989/73 (Korea1K)
-=0.05418/884 (TOMMO)
-=0.06456/5592 (GnomAD)
-=0.06711/40 (NorthernSweden)
HGVS:: NC_000010.11:g.30611558_30611559del, NC_000010.10:g.30900487_30900488del

Select item 149127987014.

rs1491279870 [Homo sapiens]

Variant type:: INS
Alleles:: ->C,CTC [Show Flanks]
Chromosome:: 10:30630940 (GRCh38)
10:30919870 (GRCh37)
Canonical SPDI:: NC_000010.11:30630940::C,NC_000010.11:30630940::CTC
Gene:: LYZL2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTC=0./0 (ALFA)
C=0.00009/9 (GnomAD)
C=0.00014/2 (TOMMO)
HGVS:: NC_000010.11:g.30630940_30630941insC, NC_000010.11:g.30630940_30630941insCTC, NC_000010.10:g.30919869_30919870insC, NC_000010.10:g.30919869_30919870insCTC

Select item 149127604715.

rs1491276047 has merged into rs1311113872 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>-,GAGA [Show Flanks]
Chromosome:: 10:30611599 (GRCh38)
10:30900528 (GRCh37)
Canonical SPDI:: NC_000010.11:30611597:AGA:A,NC_000010.11:30611597:AGA:AGAGA
Gene:: LYZL2 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: AGAGA=0./0 (ALFA)
AG=0.000009/1 (GnomAD)
HGVS:: NC_000010.11:g.30611599_30611600del, NC_000010.11:g.30611599_30611600dup, NC_000010.10:g.30900528_30900529del, NC_000010.10:g.30900528_30900529dup

Select item 149126804216.

rs1491268042 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AGAA,AGAAAGAA [Show Flanks]
Chromosome:: 10:30611554 (GRCh38)
10:30900484 (GRCh37)
Canonical SPDI:: NC_000010.11:30611554:GAA:GAAAGAA,NC_000010.11:30611554:GAA:GAAAGAAAGAA
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAAAGAAAGAA=0./0 (ALFA)
GAAA=0.00009/7 (GnomAD)
HGVS:: NC_000010.11:g.30611557_30611558insAGAA, NC_000010.11:g.30611557_30611558insAGAAAGAA, NC_000010.10:g.30900486_30900487insAGAA, NC_000010.10:g.30900486_30900487insAGAAAGAA

Select item 149123525517.

rs1491235255 has merged into rs1276186380 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,A,AAAA [Show Flanks]
Chromosome:: 10:30611613 (GRCh38)
10:30900542 (GRCh37)
Canonical SPDI:: NC_000010.11:30611611:AAA:A,NC_000010.11:30611611:AAA:AA,NC_000010.11:30611611:AAA:AAAAA
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000010.11:g.30611613_30611614del, NC_000010.11:g.30611614del, NC_000010.11:g.30611613_30611614dup, NC_000010.10:g.30900542_30900543del, NC_000010.10:g.30900543del, NC_000010.10:g.30900542_30900543dup

Select item 149119973918.

rs1491199739 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 10:30611598 (GRCh38)
10:30900528 (GRCh37)
Canonical SPDI:: NC_000010.11:30611598:G:GG
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
HGVS:: NC_000010.11:g.30611599dup, NC_000010.10:g.30900528dup

Select item 149119225319.

rs1491192253 [Homo sapiens]

Variant type:: INS
Alleles:: ->AAGAAAGAAAGAAAGAAAGAAAGAAAG,AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAC [Show Flanks]
Chromosome:: 10:30611726 (GRCh38)
10:30900656 (GRCh37)
Canonical SPDI:: NC_000010.11:30611726::AAGAAAGAAAGAAAGAAAGAAAGAAAG,NC_000010.11:30611726::AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAC
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency
MAF:: AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAC=0.00001/1 (GnomAD)
HGVS:: NC_000010.11:g.30611726_30611727insAAGAAAGAAAGAAAGAAAGAAAGAAAG, NC_000010.11:g.30611726_30611727insAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAC, NC_000010.10:g.30900655_30900656insAAGAAAGAAAGAAAGAAAGAAAGAAAG, NC_000010.10:g.30900655_30900656insAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAC

Select item 149118414120.

rs1491184141 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AGAA,AGAAAGAA,AGAAAGAAAGAA,AGAAAGAAAGAAAGAA,AGAAGAA [Show Flanks]
Chromosome:: 10:30611566 (GRCh38)
10:30900496 (GRCh37)
Canonical SPDI:: NC_000010.11:30611566:GAA:GAAAGAA,NC_000010.11:30611566:GAA:GAAAGAAAGAA,NC_000010.11:30611566:GAA:GAAAGAAAGAAAGAA,NC_000010.11:30611566:GAA:GAAAGAAAGAAAGAAAGAA,NC_000010.11:30611566:GAA:GAAAGAAGAA
Gene:: LYZL2 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAAAGAAAGAA=0./0 (ALFA)
HGVS:: NC_000010.11:g.30611569_30611570insAGAA, NC_000010.11:g.30611569_30611570insAGAAAGAA, NC_000010.11:g.30611570AGAA[3], NC_000010.11:g.30611570AGAA[4], NC_000010.11:g.30611569_30611570insAGAAGAA, NC_000010.10:g.30900498_30900499insAGAA, NC_000010.10:g.30900498_30900499insAGAAAGAA, NC_000010.10:g.30900499AGAA[3], NC_000010.10:g.30900499AGAA[4], NC_000010.10:g.30900498_30900499insAGAAGAA

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