SNP Links for Gene (Select 125958) - SNP

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Select item 14913666271.

rs1491366627 has merged into rs56111510 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAA>-,A,AA,AAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 19:9215351 (GRCh38)
19:9326027 (GRCh37)
Canonical SPDI:: NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9215341:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000019.10:g.9215351_9215365del, NC_000019.10:g.9215352_9215365del, NC_000019.10:g.9215353_9215365del, NC_000019.10:g.9215354_9215365del, NC_000019.10:g.9215358_9215365del, NC_000019.10:g.9215359_9215365del, NC_000019.10:g.9215360_9215365del, NC_000019.10:g.9215361_9215365del, NC_000019.10:g.9215362_9215365del, NC_000019.10:g.9215363_9215365del, NC_000019.10:g.9215364_9215365del, NC_000019.10:g.9215365del, NC_000019.10:g.9215365dup, NC_000019.10:g.9215364_9215365dup, NC_000019.10:g.9215363_9215365dup, NC_000019.10:g.9215361_9215365dup, NC_000019.10:g.9215360_9215365dup, NC_000019.10:g.9215359_9215365dup, NC_000019.9:g.9326027_9326041del, NC_000019.9:g.9326028_9326041del, NC_000019.9:g.9326029_9326041del, NC_000019.9:g.9326030_9326041del, NC_000019.9:g.9326034_9326041del, NC_000019.9:g.9326035_9326041del, NC_000019.9:g.9326036_9326041del, NC_000019.9:g.9326037_9326041del, NC_000019.9:g.9326038_9326041del, NC_000019.9:g.9326039_9326041del, NC_000019.9:g.9326040_9326041del, NC_000019.9:g.9326041del, NC_000019.9:g.9326041dup, NC_000019.9:g.9326040_9326041dup, NC_000019.9:g.9326039_9326041dup, NC_000019.9:g.9326037_9326041dup, NC_000019.9:g.9326036_9326041dup, NC_000019.9:g.9326035_9326041dup, NG_027953.1:g.4516_4530del, NG_027953.1:g.4517_4530del, NG_027953.1:g.4518_4530del, NG_027953.1:g.4519_4530del, NG_027953.1:g.4523_4530del, NG_027953.1:g.4524_4530del, NG_027953.1:g.4525_4530del, NG_027953.1:g.4526_4530del, NG_027953.1:g.4527_4530del, NG_027953.1:g.4528_4530del, NG_027953.1:g.4529_4530del, NG_027953.1:g.4530del, NG_027953.1:g.4530dup, NG_027953.1:g.4529_4530dup, NG_027953.1:g.4528_4530dup, NG_027953.1:g.4526_4530dup, NG_027953.1:g.4525_4530dup, NG_027953.1:g.4524_4530dup

Select item 14913471562.

rs1491347156 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 19:9215341 (GRCh38)
19:9326017 (GRCh37)
Canonical SPDI:: NC_000019.10:9215340:CA:
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.00708/84 (ALFA)
-=0.00287/81 (TOMMO)
HGVS:: NC_000019.10:g.9215341_9215342del, NC_000019.9:g.9326017_9326018del, NG_027953.1:g.4530_4531del

Select item 14904746623.

rs1490474662 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 19:9213669 (GRCh38)
19:9324345 (GRCh37)
Canonical SPDI:: NC_000019.10:9213668:T:C,NC_000019.10:9213668:T:G
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.0027/5 (Korea1K)
HGVS:: NC_000019.10:g.9213669T>C, NC_000019.10:g.9213669T>G, NC_000019.9:g.9324345T>C, NC_000019.9:g.9324345T>G, NG_027953.1:g.6203A>G, NG_027953.1:g.6203A>C, NM_001005191.3:c.*230A>G, NM_001005191.3:c.*230A>C

Select item 14902646374.

rs1490264637 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:9214101 (GRCh38)
19:9324777 (GRCh37)
Canonical SPDI:: NC_000019.10:9214100:C:A
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9214101C>A, NC_000019.9:g.9324777C>A, NG_027953.1:g.5771G>T, NM_001005191.2:c.737G>T, NM_001005191.3:c.737G>T, NP_001005191.1:p.Cys246Phe

Select item 14901944665.

rs1490194466 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 19:9213760 (GRCh38)
19:9324436 (GRCh37)
Canonical SPDI:: NC_000019.10:9213759:A:C
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.9213760A>C, NC_000019.9:g.9324436A>C, NG_027953.1:g.6112T>G, NM_001005191.3:c.*139T>G

Select item 14893693666.

rs1489369366 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:9215920 (GRCh38)
19:9326596 (GRCh37)
Canonical SPDI:: NC_000019.10:9215919:A:G
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9215920A>G, NC_000019.9:g.9326596A>G, NG_027953.1:g.3952T>C

Select item 14884464377.

rs1488446437 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:9214716 (GRCh38)
19:9325392 (GRCh37)
Canonical SPDI:: NC_000019.10:9214715:C:A
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000019.10:g.9214716C>A, NC_000019.9:g.9325392C>A, NG_027953.1:g.5156G>T, NM_001005191.2:c.122G>T, NM_001005191.3:c.122G>T, NP_001005191.1:p.Gly41Val

Select item 14866463268.

rs1486646326 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:9215019 (GRCh38)
19:9325695 (GRCh37)
Canonical SPDI:: NC_000019.10:9215018:A:G
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9215019A>G, NC_000019.9:g.9325695A>G, NG_027953.1:g.4853T>C

Select item 14847610229.

rs1484761022 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:9216219 (GRCh38)
19:9326895 (GRCh37)
Canonical SPDI:: NC_000019.10:9216218:T:C
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.9216219T>C, NC_000019.9:g.9326895T>C, NG_005822.3:g.132T>C, NG_027953.1:g.3653A>G

Select item 148467362310.

rs1484673623 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:9214127 (GRCh38)
19:9324803 (GRCh37)
Canonical SPDI:: NC_000019.10:9214126:G:T
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9214127G>T, NC_000019.9:g.9324803G>T, NG_027953.1:g.5745C>A, NM_001005191.2:c.711C>A, NM_001005191.3:c.711C>A

Select item 148362474811.

rs1483624748 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:9214670 (GRCh38)
19:9325346 (GRCh37)
Canonical SPDI:: NC_000019.10:9214669:G:A
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.9214670G>A, NC_000019.9:g.9325346G>A, NG_027953.1:g.5202C>T, NM_001005191.2:c.168C>T, NM_001005191.3:c.168C>T

Select item 148332169312.

rs1483321693 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:9216791 (GRCh38)
19:9327467 (GRCh37)
Canonical SPDI:: NC_000019.10:9216790:C:G
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9216791C>G, NC_000019.9:g.9327467C>G, NG_027953.1:g.3081G>C

Select item 148271116613.

rs1482711166 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 19:9213856 (GRCh38)
19:9324532 (GRCh37)
Canonical SPDI:: NC_000019.10:9213855:A:C
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: C=0.000005/1 (GnomAD_exomes)
C=0.00006/1 (TOMMO)
HGVS:: NC_000019.10:g.9213856A>C, NC_000019.9:g.9324532A>C, NG_027953.1:g.6016T>G, NM_001005191.2:c.*43T>G, NM_001005191.3:c.*43T>G

Select item 148162817614.

rs1481628176 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:9214250 (GRCh38)
19:9324926 (GRCh37)
Canonical SPDI:: NC_000019.10:9214249:G:A
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.9214250G>A, NC_000019.9:g.9324926G>A, NG_027953.1:g.5622C>T, NM_001005191.2:c.588C>T, NM_001005191.3:c.588C>T

Select item 148091842015.

rs1480918420 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:9213736 (GRCh38)
19:9324412 (GRCh37)
Canonical SPDI:: NC_000019.10:9213735:T:C
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.9213736T>C, NC_000019.9:g.9324412T>C, NG_027953.1:g.6136A>G, NM_001005191.3:c.*163A>G

Select item 147897723416.

rs1478977234 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:9216138 (GRCh38)
19:9326814 (GRCh37)
Canonical SPDI:: NC_000019.10:9216137:C:T
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9216138C>T, NC_000019.9:g.9326814C>T, NG_005822.3:g.51C>T, NG_027953.1:g.3734G>A

Select item 147863421717.

rs1478634217 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:9216525 (GRCh38)
19:9327201 (GRCh37)
Canonical SPDI:: NC_000019.10:9216524:T:C
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000019/5 (TOPMED)
HGVS:: NC_000019.10:g.9216525T>C, NC_000019.9:g.9327201T>C, NG_027953.1:g.3347A>G

Select item 147818345918.

rs1478183459 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:9214793 (GRCh38)
19:9325469 (GRCh37)
Canonical SPDI:: NC_000019.10:9214792:C:T
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.0002/2 (ALFA)
HGVS:: NC_000019.10:g.9214793C>T, NC_000019.9:g.9325469C>T, NG_027953.1:g.5079G>A, NM_001005191.2:c.45G>A, NM_001005191.3:c.45G>A

Select item 147736606119.

rs1477366061 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 19:9215374 (GRCh38)
19:9326050 (GRCh37)
Canonical SPDI:: NC_000019.10:9215373:T:A
Gene:: OR7E24 (Varview), OR7D4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.9215374T>A, NC_000019.9:g.9326050T>A, NG_027953.1:g.4498A>T

Select item 147535305220.

rs1475353052 [Homo sapiens]

Variant type:: SNV:
Alleles:: T>-
Chromosome:: no mapping
Canonical SPDI:

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