SNP Links for Gene (Select 126755) - SNP

Warning: The NCBI web site requires JavaScript to function. more...

Links from Gene

Items: 1 to 20 of 9750

<< First< Prev

Page of 488

Next >Last >>

Select item 14915720451.

rs1491572045 [Homo sapiens]

Variant type:: SNV:
Alleles:: TT>-
Chromosome:: no mapping
Canonical SPDI:

Select item 14915698202.

rs1491569820 [Homo sapiens]

Variant type:: DELINS
Alleles:: GT>- [Show Flanks]
Chromosome:: 1:13502113 (GRCh38)
1:13828568 (GRCh37)
Canonical SPDI:: NC_000001.11:13502111:TGT:T
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000001.11:g.13502113_13502114del, NC_000001.10:g.13828568_13828569del

Select item 14915229033.

rs1491522903 [Homo sapiens]

Variant type:: INS
Alleles:: ->T [Show Flanks]
Chromosome:: 1:13481787 (GRCh38)
1:13808242 (GRCh37)
Canonical SPDI:: NC_000001.11:13481787::T
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.00448/103 (GnomAD)
T=0.00569/10 (Korea1K)
T=0.01017/286 (TOMMO)
HGVS:: NC_000001.11:g.13481787_13481788insT, NC_000001.10:g.13808241_13808242insT

Select item 14914554304.

rs1491455430 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 1:13502112 (GRCh38)
1:13828568 (GRCh37)
Canonical SPDI:: NC_000001.11:13502112:G:GG
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
HGVS:: NC_000001.11:g.13502113dup, NC_000001.10:g.13828568dup

Select item 14914423765.

rs1491442376 [Homo sapiens]

Variant type:: DELINS
Alleles:: CC>-,C [Show Flanks]
Chromosome:: 1:13481788 (GRCh38)
1:13808242 (GRCh37)
Canonical SPDI:: NC_000001.11:13481786:CCC:C,NC_000001.11:13481786:CCC:CC
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00025/3 (ALFA)
-=0.00169/1 (NorthernSweden)
-=0.0128/201 (TOMMO)
-=0.01767/31 (Korea1K)
-=0.02725/646 (GnomAD)
HGVS:: NC_000001.11:g.13481788_13481789del, NC_000001.11:g.13481789del, NC_000001.10:g.13808242_13808243del, NC_000001.10:g.13808243del

Select item 14913480816.

rs1491348081 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CAAA [Show Flanks]
Chromosome:: 1:13498250 (GRCh38)
1:13824703 (GRCh37)
Canonical SPDI:: NC_000001.11:13498250:AAA:AAACAAA
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AAACAAA=0./0 (ALFA)
HGVS:: NC_000001.11:g.13498253_13498254insCAAA, NC_000001.10:g.13824705_13824706insCAAA

Select item 14912987097.

rs1491298709 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 1:13500254 (GRCh38)
1:13826707 (GRCh37)
Canonical SPDI:: NC_000001.11:13500253:CA:
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00303/36 (ALFA)
HGVS:: NC_000001.11:g.13500254_13500255del, NC_000001.10:g.13826719dup, NC_000001.10:g.13826706del

Select item 14912340758.

rs1491234075 has merged into rs79709070 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAA>-,AAA,AAAA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA [Show Flanks]
Chromosome:: 1:13482591 (GRCh38)
1:13809045 (GRCh37)
Canonical SPDI:: NC_000001.11:13482581:AAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000001.11:13482581:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:13482581:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:13482581:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:13482581:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:13482581:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:13482581:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA
Gene:: LRRC38 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000001.11:g.13482591_13482597del, NC_000001.11:g.13482594_13482597del, NC_000001.11:g.13482595_13482597del, NC_000001.11:g.13482596_13482597del, NC_000001.11:g.13482597del, NC_000001.11:g.13482597dup, NC_000001.11:g.13482596_13482597dup, NC_000001.10:g.13809045_13809051del, NC_000001.10:g.13809048_13809051del, NC_000001.10:g.13809049_13809051del, NC_000001.10:g.13809050_13809051del, NC_000001.10:g.13809051del, NC_000001.10:g.13809051dup, NC_000001.10:g.13809050_13809051dup

Select item 14911913649.

rs1491191364 has merged into rs112781450 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAA>-,A,AA,AAA,AAAA,AAAAAA,AAAAAAA,AAAAAAAAAAA [Show Flanks]
Chromosome:: 1:13498256 (GRCh38)
1:13824708 (GRCh37)
Canonical SPDI:: NC_000001.11:13498249:AAAAAAAAAAA:AAAAAA,NC_000001.11:13498249:AAAAAAAAAAA:AAAAAAA,NC_000001.11:13498249:AAAAAAAAAAA:AAAAAAAA,NC_000001.11:13498249:AAAAAAAAAAA:AAAAAAAAA,NC_000001.11:13498249:AAAAAAAAAAA:AAAAAAAAAA,NC_000001.11:13498249:AAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:13498249:AAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:13498249:AAAAAAAAAAA:AAAAAAAAAAAAAAAAA
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAA=0./0 (ALFA)
-=0.25/10 (GENOME_DK)
-=0.283333/170 (NorthernSweden)
-=0.328324/86904 (TOPMED)
-=0.420727/2107 (1000Genomes)
HGVS:: NC_000001.11:g.13498256_13498260del, NC_000001.11:g.13498257_13498260del, NC_000001.11:g.13498258_13498260del, NC_000001.11:g.13498259_13498260del, NC_000001.11:g.13498260del, NC_000001.11:g.13498260dup, NC_000001.11:g.13498259_13498260dup, NC_000001.11:g.13498255_13498260dup, NC_000001.10:g.13824708_13824712del, NC_000001.10:g.13824709_13824712del, NC_000001.10:g.13824710_13824712del, NC_000001.10:g.13824711_13824712del, NC_000001.10:g.13824712del, NC_000001.10:g.13824712dup, NC_000001.10:g.13824711_13824712dup, NC_000001.10:g.13824707_13824712dup

Select item 149119134410.

rs1491191344 has merged into rs33912498 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAA>-,A,AA,AAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAAA [Show Flanks]
Chromosome:: 1:13500266 (GRCh38)
1:13826718 (GRCh37)
Canonical SPDI:: NC_000001.11:13500254:AAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000001.11:13500254:AAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:13500254:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:13500254:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:13500254:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:13500254:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:13500254:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:13500254:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000001.11:g.13500266_13500269del, NC_000001.11:g.13500267_13500269del, NC_000001.11:g.13500268_13500269del, NC_000001.11:g.13500269del, NC_000001.11:g.13500269dup, NC_000001.11:g.13500268_13500269dup, NC_000001.11:g.13500267_13500269dup, NC_000001.11:g.13500264_13500269dup, NC_000001.10:g.13826718_13826719dup, NC_000001.10:g.13826718_13826719del, NC_000001.10:g.13826719del, NC_000001.10:g.13826719dup, NC_000001.10:g.13826717_13826719dup, NC_000001.10:g.13826716_13826719dup, NC_000001.10:g.13826715_13826719dup, NC_000001.10:g.13826712_13826719dup

Select item 149113849311.

rs1491138493 [Homo sapiens]

Variant type:: INS
Alleles:: ->C,G [Show Flanks]
Chromosome:: 1:13482582 (GRCh38)
1:13809037 (GRCh37)
Canonical SPDI:: NC_000001.11:13482582::C,NC_000001.11:13482582::G
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000001.11:g.13482582_13482583insC, NC_000001.11:g.13482582_13482583insG, NC_000001.10:g.13809036_13809037insC, NC_000001.10:g.13809036_13809037insG

Select item 149110857412.

rs1491108574 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 1:13488031 (GRCh38)
1:13814486 (GRCh37)
Canonical SPDI:: NC_000001.11:13488031::G
Gene:: LRRC38 (Varview), LOC102724856 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.001121/5 (ALFA)
G=0.000248/4 (TOMMO)
G=0.002199/249 (GnomAD)
HGVS:: NC_000001.11:g.13488031_13488032insG, NC_000001.10:g.13814485_13814486insG

Select item 149108147513.

rs1491081475 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 1:13504864 (GRCh38)
1:13831331 (GRCh37)
Canonical SPDI:: NC_000001.11:13504864::G
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: G=0.000008/1 (GnomAD)
HGVS:: NC_000001.11:g.13504864_13504865insG, NC_000001.10:g.13831330_13831331insG

Select item 149105777614.

rs1491057776 [Homo sapiens]

Variant type:: INS
Alleles:: ->T,TTTT [Show Flanks]
Chromosome:: 1:13481761 (GRCh38)
1:13808232 (GRCh37)
Canonical SPDI:: NC_000001.11:13481761::T,NC_000001.11:13481761::TTTT
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTT=0./0 (ALFA)
T=0.00008/4 (GnomAD)
T=0.00018/3 (TOMMO)
HGVS:: NC_000001.11:g.13481761_13481762insT, NC_000001.11:g.13481761_13481762insTTTT, NC_000001.10:g.13808231_13808232insT, NC_000001.10:g.13808231_13808232insTTTT

Select item 149099460915.

rs1490994609 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:13492014 (GRCh38)
1:13818466 (GRCh37)
Canonical SPDI:: NC_000001.11:13492013:T:C
Gene:: LRRC38 (Varview), LOC102724856 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.13492014T>C, NC_000001.10:g.13818466T>C

Select item 149097812616.

rs1490978126 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:13478777 (GRCh38)
1:13805245 (GRCh37)
Canonical SPDI:: NC_000001.11:13478776:T:C
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.13478777T>C, NC_000001.10:g.13805245T>C

Select item 149097082217.

rs1490970822 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:13496037 (GRCh38)
1:13822489 (GRCh37)
Canonical SPDI:: NC_000001.11:13496036:T:G
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.13496037T>G, NC_000001.10:g.13822489T>G

Select item 149093639318.

rs1490936393 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:13479152 (GRCh38)
1:13805620 (GRCh37)
Canonical SPDI:: NC_000001.11:13479151:T:C
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000021/3 (GnomAD)
C=0.000026/7 (TOPMED)
HGVS:: NC_000001.11:g.13479152T>C, NC_000001.10:g.13805620T>C

Select item 149072527419.

rs1490725274 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:13493751 (GRCh38)
1:13820203 (GRCh37)
Canonical SPDI:: NC_000001.11:13493750:T:C
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.0002/1 (ALFA)
C=0.0002/1 (Estonian)
HGVS:: NC_000001.11:g.13493751T>C, NC_000001.10:g.13820203T>C

Select item 149071528520.

rs1490715285 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:13484949 (GRCh38)
1:13811403 (GRCh37)
Canonical SPDI:: NC_000001.11:13484948:T:C
Gene:: LRRC38 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.13484949T>C, NC_000001.10:g.13811403T>C

<< First< Prev

Page of 488

Next >Last >>

Supplemental Content

Filters: Manage Filters

Find related data

Recent activity

Clear Turn Off Turn On

SNP Links for Gene (Select 126755) (9750)
SNP

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to: