SNP Links for Gene (Select 138804) - SNP

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Select item 14893449061.

rs1489344906 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 9:104527951 (GRCh38)
9:107290232 (GRCh37)
Canonical SPDI:: NC_000009.12:104527950:T:A,NC_000009.12:104527950:T:C
Gene:: OR13C4 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.104527951T>A, NC_000009.12:g.104527951T>C, NC_000009.11:g.107290232T>A, NC_000009.11:g.107290232T>C

Select item 14889371572.

rs1488937157 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 9:104527113 (GRCh38)
9:107289394 (GRCh37)
Canonical SPDI:: NC_000009.12:104527112:C:A
Gene:: OR13C4 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.104527113C>A, NC_000009.11:g.107289394C>A, NM_001001919.1:c.97G>T, NP_001001919.1:p.Val33Phe

Select item 14870752883.

rs1487075288 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:104526783 (GRCh38)
9:107289064 (GRCh37)
Canonical SPDI:: NC_000009.12:104526782:G:A
Gene:: OR13C4 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.104526783G>A, NC_000009.11:g.107289064G>A, NM_001001919.1:c.427C>T

Select item 14852608454.

rs1485260845 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 9:104528251 (GRCh38)
9:107290532 (GRCh37)
Canonical SPDI:: NC_000009.12:104528250:A:T
Gene:: OR13C4 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.104528251A>T, NC_000009.11:g.107290532A>T

Select item 14835159345.

rs1483515934 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:104526873 (GRCh38)
9:107289154 (GRCh37)
Canonical SPDI:: NC_000009.12:104526872:A:G
Gene:: OR13C4 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000009.12:g.104526873A>G, NC_000009.11:g.107289154A>G, NM_001001919.1:c.337T>C, NP_001001919.1:p.Phe113Leu

Select item 14819994716.

rs1481999471 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:104527085 (GRCh38)
9:107289366 (GRCh37)
Canonical SPDI:: NC_000009.12:104527084:T:C
Gene:: OR13C4 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.104527085T>C, NC_000009.11:g.107289366T>C, NM_001001919.1:c.125A>G, NP_001001919.1:p.Asn42Ser

Select item 14801574927.

rs1480157492 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 9:104528991 (GRCh38)
9:107291272 (GRCh37)
Canonical SPDI:: NC_000009.12:104528990:G:C
Gene:: OR13C4 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.104528991G>C, NC_000009.11:g.107291272G>C

Select item 14783565648.

rs1478356564 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:104526407 (GRCh38)
9:107288688 (GRCh37)
Canonical SPDI:: NC_000009.12:104526406:A:G
Gene:: OR13C4 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.104526407A>G, NC_000009.11:g.107288688A>G, NM_001001919.1:c.803T>C, NP_001001919.1:p.Leu268Pro

Select item 14778718519.

rs1477871851 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 9:104527702 (GRCh38)
9:107289983 (GRCh37)
Canonical SPDI:: NC_000009.12:104527701:C:G,NC_000009.12:104527701:C:T
Gene:: OR13C4 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.104527702C>G, NC_000009.12:g.104527702C>T, NC_000009.11:g.107289983C>G, NC_000009.11:g.107289983C>T

Select item 147666144510.

rs1476661445 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 9:104527535 (GRCh38)
9:107289816 (GRCh37)
Canonical SPDI:: NC_000009.12:104527534:A:C
Gene:: OR13C4 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000019/5 (TOPMED)
HGVS:: NC_000009.12:g.104527535A>C, NC_000009.11:g.107289816A>C

Select item 147645039611.

rs1476450396 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 9:104526418 (GRCh38)
9:107288699 (GRCh37)
Canonical SPDI:: NC_000009.12:104526417:G:A,NC_000009.12:104526417:G:C
Gene:: OR13C4 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000051/1 (ALFA)
C=0./0 (GnomAD)
C=0.000012/3 (GnomAD_exomes)
HGVS:: NC_000009.12:g.104526418G>A, NC_000009.12:g.104526418G>C, NC_000009.11:g.107288699G>A, NC_000009.11:g.107288699G>C, NM_001001919.1:c.792C>T, NM_001001919.1:c.792C>G

Select item 147348605412.

rs1473486054 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:104525964 (GRCh38)
9:107288245 (GRCh37)
Canonical SPDI:: NC_000009.12:104525963:A:G
Gene:: OR13C4 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.104525964A>G, NC_000009.11:g.107288245A>G

Select item 147055998813.

rs1470559988 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 9:104529120 (GRCh38)
9:107291401 (GRCh37)
Canonical SPDI:: NC_000009.12:104529119:A:C
Gene:: OR13C4 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.104529120A>C, NC_000009.11:g.107291401A>C

Select item 147012840214.

rs1470128402 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAC>- [Show Flanks]
Chromosome:: 9:104528464 (GRCh38)
9:107290745 (GRCh37)
Canonical SPDI:: NC_000009.12:104528460:AACAAC:AAC
Gene:: OR13C4 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: AACAAC=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.104528461AAC[1], NC_000009.11:g.107290742AAC[1]

Select item 146931754615.

rs1469317546 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:104528745 (GRCh38)
9:107291026 (GRCh37)
Canonical SPDI:: NC_000009.12:104528744:T:A
Gene:: OR13C4 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.104528745T>A, NC_000009.11:g.107291026T>A

Select item 146858183016.

rs1468581830 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 9:104529051 (GRCh38)
9:107291332 (GRCh37)
Canonical SPDI:: NC_000009.12:104529050:G:T
Gene:: OR13C4 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.104529051G>T, NC_000009.11:g.107291332G>T

Select item 146718910817.

rs1467189108 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:104526316 (GRCh38)
9:107288597 (GRCh37)
Canonical SPDI:: NC_000009.12:104526315:C:T
Gene:: OR13C4 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: T=0.000111/1 (ALFA)
T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.104526316C>T, NC_000009.11:g.107288597C>T, NM_001001919.1:c.894G>A

Select item 146667829318.

rs1466678293 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:104526072 (GRCh38)
9:107288353 (GRCh37)
Canonical SPDI:: NC_000009.12:104526071:G:A
Gene:: OR13C4 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.104526072G>A, NC_000009.11:g.107288353G>A

Select item 146665916319.

rs1466659163 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 9:104526353 (GRCh38)
9:107288635 (GRCh37)
Canonical SPDI:: NC_000009.12:104526353:CCCC:CCCCC
Gene:: OR13C4 (Varview)
Functional Consequence:: coding_sequence_variant,frameshift_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCC=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.104526357dup, NC_000009.11:g.107288638dup, NM_001001919.1:c.856dup, NP_001001919.1:p.Val286fs

Select item 146482577420.

rs1464825774 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:104527706 (GRCh38)
9:107289987 (GRCh37)
Canonical SPDI:: NC_000009.12:104527705:T:A
Gene:: OR13C4 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.104527706T>A, NC_000009.11:g.107289987T>A

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