SNP Links for Gene (Select 139538) - SNP

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Select item 14904527531.

rs1490452753 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:26556804 (GRCh38)
X:26574921 (GRCh37)
Canonical SPDI:: NC_000023.11:26556803:G:A
Gene:: VENTXP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.00001/1 (GnomAD)
A=0.000045/1 (TOMMO)
HGVS:: NC_000023.11:g.26556804G>A, NC_000023.10:g.26574921G>A

Select item 14902663542.

rs1490266354 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:26559381 (GRCh38)
X:26577498 (GRCh37)
Canonical SPDI:: NC_000023.11:26559380:T:C
Gene:: VENTXP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.26559381T>C, NC_000023.10:g.26577498T>C, NR_001559.2:n.1045T>C

Select item 14902149463.

rs1490214946 [Homo sapiens]

Variant type:: DELINS
Alleles:: AATA>- [Show Flanks]
Chromosome:: X:26560854 (GRCh38)
X:26578971 (GRCh37)
Canonical SPDI:: NC_000023.11:26560850:ATAAATA:ATA
Gene:: VENTXP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.26560854_26560857del, NC_000023.10:g.26578971_26578974del, NR_001559.2:n.2518_2521del

Select item 14896520844.

rs1489652084 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: X:26560134 (GRCh38)
X:26578251 (GRCh37)
Canonical SPDI:: NC_000023.11:26560133:A:C
Gene:: VENTXP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.000285/4 (ALFA)
C=0.000019/5 (TOPMED)
HGVS:: NC_000023.11:g.26560134A>C, NC_000023.10:g.26578251A>C, NR_001559.2:n.1798A>C

Select item 14891058015.

rs1489105801 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:26560106 (GRCh38)
X:26578223 (GRCh37)
Canonical SPDI:: NC_000023.11:26560105:C:T
Gene:: VENTXP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.26560106C>T, NC_000023.10:g.26578223C>T, NR_001559.2:n.1770C>T

Select item 14888629936.

rs1488862993 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: X:26559421 (GRCh38)
X:26577538 (GRCh37)
Canonical SPDI:: NC_000023.11:26559420:A:G,NC_000023.11:26559420:A:T
Gene:: VENTXP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.00004/1 (TOMMO)
T=0.00021/1 (1000Genomes)
HGVS:: NC_000023.11:g.26559421A>G, NC_000023.11:g.26559421A>T, NC_000023.10:g.26577538A>G, NC_000023.10:g.26577538A>T, NR_001559.2:n.1085A>G, NR_001559.2:n.1085A>T

Select item 14880454717.

rs1488045471 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: X:26557994 (GRCh38)
X:26576111 (GRCh37)
Canonical SPDI:: NC_000023.11:26557993:A:T
Gene:: VENTXP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.26557994A>T, NC_000023.10:g.26576111A>T, NG_026809.2:g.114A>T

Select item 14880143368.

rs1488014336 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:26556532 (GRCh38)
X:26574649 (GRCh37)
Canonical SPDI:: NC_000023.11:26556531:C:G
Gene:: VENTXP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00001/1 (GnomAD)
G=0.000011/3 (TOPMED)
G=0.000342/1 (KOREAN)
HGVS:: NC_000023.11:g.26556532C>G, NC_000023.10:g.26574649C>G

Select item 14847835929.

rs1484783592 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:26559213 (GRCh38)
X:26577330 (GRCh37)
Canonical SPDI:: NC_000023.11:26559212:G:A
Gene:: VENTXP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.00001/1 (GnomAD)
A=0.000585/8 (TOMMO)
HGVS:: NC_000023.11:g.26559213G>A, NC_000023.10:g.26577330G>A, NR_001559.2:n.877G>A

Select item 148419348110.

rs1484193481 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:26556945 (GRCh38)
X:26575062 (GRCh37)
Canonical SPDI:: NC_000023.11:26556944:T:C
Gene:: VENTXP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000023/6 (TOPMED)
HGVS:: NC_000023.11:g.26556945T>C, NC_000023.10:g.26575062T>C

Select item 148412595811.

rs1484125958 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:26560648 (GRCh38)
X:26578765 (GRCh37)
Canonical SPDI:: NC_000023.11:26560647:C:T
Gene:: VENTXP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.26560648C>T, NC_000023.10:g.26578765C>T, NR_001559.2:n.2312C>T

Select item 148391763412.

rs1483917634 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:26556401 (GRCh38)
X:26574518 (GRCh37)
Canonical SPDI:: NC_000023.11:26556400:C:T
Gene:: VENTXP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000029/3 (GnomAD)
HGVS:: NC_000023.11:g.26556401C>T, NC_000023.10:g.26574518C>T

Select item 148328301413.

rs1483283014 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: X:26561491 (GRCh38)
X:26579608 (GRCh37)
Canonical SPDI:: NC_000023.11:26561490:T:G
Gene:: VENTXP1 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.26561491T>G, NC_000023.10:g.26579608T>G

Select item 148194700514.

rs1481947005 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: X:26559599 (GRCh38)
X:26577716 (GRCh37)
Canonical SPDI:: NC_000023.11:26559598:T:A
Gene:: VENTXP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000023.11:g.26559599T>A, NC_000023.10:g.26577716T>A, NR_001559.2:n.1263T>A

Select item 148166660715.

rs1481666607 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:26558190 (GRCh38)
X:26576307 (GRCh37)
Canonical SPDI:: NC_000023.11:26558189:G:C
Gene:: VENTXP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000019/2 (GnomAD)
HGVS:: NC_000023.11:g.26558190G>C, NC_000023.10:g.26576307G>C, NG_026809.2:g.310G>C

Select item 148162990016.

rs1481629900 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: X:26558866 (GRCh38)
X:26576983 (GRCh37)
Canonical SPDI:: NC_000023.11:26558865:G:C,NC_000023.11:26558865:G:T
Gene:: VENTXP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00001/1 (GnomAD)
C=0.00003/8 (TOPMED)
HGVS:: NC_000023.11:g.26558866G>C, NC_000023.11:g.26558866G>T, NC_000023.10:g.26576983G>C, NC_000023.10:g.26576983G>T, NR_001559.2:n.530G>C, NR_001559.2:n.530G>T

Select item 148064456217.

rs1480644562 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:26558268 (GRCh38)
X:26576385 (GRCh37)
Canonical SPDI:: NC_000023.11:26558267:A:G
Gene:: VENTXP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.26558268A>G, NC_000023.10:g.26576385A>G, NG_026809.2:g.388A>G

Select item 147918713018.

rs1479187130 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: X:26557651 (GRCh38)
X:26575768 (GRCh37)
Canonical SPDI:: NC_000023.11:26557650:T:G
Gene:: VENTXP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.26557651T>G, NC_000023.10:g.26575768T>G

Select item 147915611219.

rs1479156112 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:26560226 (GRCh38)
X:26578343 (GRCh37)
Canonical SPDI:: NC_000023.11:26560225:A:G
Gene:: VENTXP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.26560226A>G, NC_000023.10:g.26578343A>G, NR_001559.2:n.1890A>G

Select item 147605508220.

rs1476055082 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: X:26557528 (GRCh38)
X:26575645 (GRCh37)
Canonical SPDI:: NC_000023.11:26557527:TTTT:TTT
Gene:: VENTXP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.26557531del, NC_000023.10:g.26575648del

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