Links from Gene
Items: 1 to 20 of 5182
1.
rs1491536529 has merged into rs11417377 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 1:84556723
(GRCh38)
1:85022406
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84556710:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:84556710:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:84556710:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:84556710:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:84556710:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:84556710:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:84556710:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:84556710:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000001.11:84556710:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84556710:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84556710:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84556710:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- CTBS (Varview), SPATA1 (Varview)
- Functional Consequence:
- downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAAAAA=0./0
(
ALFA)
A=0.2632/1318
(1000Genomes)
- HGVS:
NC_000001.11:g.84556723_84556728del, NC_000001.11:g.84556724_84556728del, NC_000001.11:g.84556725_84556728del, NC_000001.11:g.84556726_84556728del, NC_000001.11:g.84556727_84556728del, NC_000001.11:g.84556728del, NC_000001.11:g.84556728dup, NC_000001.11:g.84556727_84556728dup, NC_000001.11:g.84556726_84556728dup, NC_000001.11:g.84556725_84556728dup, NC_000001.11:g.84556723_84556728dup, NC_000001.11:g.84556722_84556728dup, NC_000001.10:g.85022406_85022411del, NC_000001.10:g.85022407_85022411del, NC_000001.10:g.85022408_85022411del, NC_000001.10:g.85022409_85022411del, NC_000001.10:g.85022410_85022411del, NC_000001.10:g.85022411del, NC_000001.10:g.85022411dup, NC_000001.10:g.85022410_85022411dup, NC_000001.10:g.85022409_85022411dup, NC_000001.10:g.85022408_85022411dup, NC_000001.10:g.85022406_85022411dup, NC_000001.10:g.85022405_85022411dup
3.
rs1490788538 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,C
[Show Flanks]
- Chromosome:
- 1:84570838
(GRCh38)
1:85036521
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84570837:G:A,NC_000001.11:84570837:G:C
- Gene:
- CTBS (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000014/2
(GnomAD)
- HGVS:
4.
rs1490763991 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C,G
[Show Flanks]
- Chromosome:
- 1:84571996
(GRCh38)
1:85037679
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84571995:T:C,NC_000001.11:84571995:T:G
- Gene:
- CTBS (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
C=0.00004/1
(TOMMO)
- HGVS:
5.
rs1490474853 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>T
[Show Flanks]
- Chromosome:
- 1:84562405
(GRCh38)
1:85028088
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84562404:G:T
- Gene:
- CTBS (Varview), SPATA1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
- HGVS:
7.
rs1490262732 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 1:84570361
(GRCh38)
1:85036044
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84570360:G:C
- Gene:
- CTBS (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
8.
rs1490219488 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->ATTTGT
[Show Flanks]
- Chromosome:
- 1:84553528
(GRCh38)
1:85019212
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84553528::ATTTGT
- Gene:
- CTBS (Varview), SPATA1 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
ATTTGT=0./0
(
ALFA)
ATTTGT=0.000004/1
(TOPMED)
- HGVS:
9.
rs1489755101 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 1:84569633
(GRCh38)
1:85035316
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84569632:T:G
- Gene:
- CTBS (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0.000071/1
(
ALFA)
G=0.000007/1
(GnomAD)
- HGVS:
10.
rs1489711068 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GAAAGAAAGAAAGAAAG>-
[Show Flanks]
- Chromosome:
- 1:84560134
(GRCh38)
1:85025817
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84560116:GAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAG:GAAAGAAAGAAAGAAAG
- Gene:
- CTBS (Varview), SPATA1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
GAAAGAAAGAAAGAAAGGAAAGAAAGAAAGAAAG=0.000084/1
(
ALFA)
-=0.000022/3
(GnomAD)
- HGVS:
12.
rs1489439402 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 1:84573399
(GRCh38)
1:85039082
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84573398:C:A
- Gene:
- CTBS (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
13.
rs1489429768 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 1:84556844
(GRCh38)
1:85022527
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84556843:T:C
- Gene:
- CTBS (Varview), SPATA1 (Varview)
- Functional Consequence:
- intron_variant,downstream_transcript_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
14.
rs1489319761 has merged into rs56101174 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 1:84557538
(GRCh38)
1:85023221
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:84557533:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- CTBS (Varview), SPATA1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAA=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
NC_000001.11:g.84557538_84557553del, NC_000001.11:g.84557539_84557553del, NC_000001.11:g.84557540_84557553del, NC_000001.11:g.84557541_84557553del, NC_000001.11:g.84557542_84557553del, NC_000001.11:g.84557543_84557553del, NC_000001.11:g.84557544_84557553del, NC_000001.11:g.84557545_84557553del, NC_000001.11:g.84557546_84557553del, NC_000001.11:g.84557547_84557553del, NC_000001.11:g.84557548_84557553del, NC_000001.11:g.84557550_84557553del, NC_000001.11:g.84557551_84557553del, NC_000001.11:g.84557552_84557553del, NC_000001.11:g.84557553del, NC_000001.11:g.84557553dup, NC_000001.11:g.84557552_84557553dup, NC_000001.11:g.84557551_84557553dup, NC_000001.11:g.84557550_84557553dup, NC_000001.11:g.84557549_84557553dup, NC_000001.11:g.84557548_84557553dup, NC_000001.11:g.84557547_84557553dup, NC_000001.11:g.84557543_84557553dup, NC_000001.11:g.84557542_84557553dup, NC_000001.11:g.84557541_84557553dup, NC_000001.11:g.84557540_84557553dup, NC_000001.11:g.84557539_84557553dup, NC_000001.11:g.84557538_84557553dup, NC_000001.11:g.84557537_84557553dup, NC_000001.11:g.84557536_84557553dup, NC_000001.11:g.84557535_84557553dup, NC_000001.11:g.84557534_84557553dup, NC_000001.11:g.84557553_84557554insAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.10:g.85023221_85023236del, NC_000001.10:g.85023222_85023236del, NC_000001.10:g.85023223_85023236del, NC_000001.10:g.85023224_85023236del, NC_000001.10:g.85023225_85023236del, NC_000001.10:g.85023226_85023236del, NC_000001.10:g.85023227_85023236del, NC_000001.10:g.85023228_85023236del, NC_000001.10:g.85023229_85023236del, NC_000001.10:g.85023230_85023236del, NC_000001.10:g.85023231_85023236del, NC_000001.10:g.85023233_85023236del, NC_000001.10:g.85023234_85023236del, NC_000001.10:g.85023235_85023236del, NC_000001.10:g.85023236del, NC_000001.10:g.85023236dup, NC_000001.10:g.85023235_85023236dup, NC_000001.10:g.85023234_85023236dup, NC_000001.10:g.85023233_85023236dup, NC_000001.10:g.85023232_85023236dup, NC_000001.10:g.85023231_85023236dup, NC_000001.10:g.85023230_85023236dup, NC_000001.10:g.85023226_85023236dup, NC_000001.10:g.85023225_85023236dup, NC_000001.10:g.85023224_85023236dup, NC_000001.10:g.85023223_85023236dup, NC_000001.10:g.85023222_85023236dup, NC_000001.10:g.85023221_85023236dup, NC_000001.10:g.85023220_85023236dup, NC_000001.10:g.85023219_85023236dup, NC_000001.10:g.85023218_85023236dup, NC_000001.10:g.85023217_85023236dup, NC_000001.10:g.85023236_85023237insAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
15.
rs1489188050 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,T
[Show Flanks]
- Chromosome:
- 1:84568402
(GRCh38)
1:85034085
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84568401:C:A,NC_000001.11:84568401:C:T
- Gene:
- CTBS (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000008/2
(TOPMED)
A=0.000035/1
(TOMMO)
- HGVS:
16.
rs1489183506 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- C>-
[Show Flanks]
- Chromosome:
- 1:84555199
(GRCh38)
1:85020882
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84555198:CC:C
- Gene:
- CTBS (Varview), SPATA1 (Varview)
- Functional Consequence:
- splice_acceptor_variant,intron_variant,genic_downstream_transcript_variant,coding_sequence_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CC=0.0004/2
(
ALFA)
-=0.0004/2
(Estonian)
- HGVS:
17.
rs1489114230 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AACA>-
[Show Flanks]
- Chromosome:
- 1:84573228
(GRCh38)
1:85038911
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84573225:CAAACA:CA
- Gene:
- CTBS (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CA=0.000224/1
(
ALFA)
-=0.000007/1
(GnomAD)
-=0.000223/1
(Estonian)
- HGVS:
18.
rs1489094093 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:84576102
(GRCh38)
1:85041785
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84576101:G:A
- Gene:
- CTBS (Varview), LOC105378819 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.00109/2
(Korea1K)
A=0.00259/43
(TOMMO)
- HGVS:
19.
rs1488649452 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->A
[Show Flanks]
- Chromosome:
- 1:84565653
(GRCh38)
1:85031337
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84565653:AAAA:AAAAA
- Gene:
- CTBS (Varview), SPATA1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAA=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
20.
rs1488547852 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:84564548
(GRCh38)
1:85030231
(GRCh37)
- Canonical SPDI:
- NC_000001.11:84564547:G:A
- Gene:
- CTBS (Varview), SPATA1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS: