SNP Links for Gene (Select 158931) - SNP

Warning: The NCBI web site requires JavaScript to function. more...

Links from Gene

Items: 1 to 20 of 885

<< First< Prev

Page of 45

Next >Last >>

Select item 14908246851.

rs1490824685 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: X:102142198 (GRCh38)
X:101397171 (GRCh37)
Canonical SPDI:: NC_000023.11:102142198:GGGG:GGGGG
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGGGG=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.102142202dup, NC_000023.10:g.101397174dup, NW_025791816.1:g.37292dup, NW_004070884.1:g.14060dup

Select item 14907994102.

rs1490799410 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: X:102142123 (GRCh38)
X:101397095 (GRCh37)
Canonical SPDI:: NC_000023.11:102142122:G:
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.00028/29 (GnomAD)
-=0.000416/110 (TOPMED)
-=0.000416/2 (1000Genomes)
HGVS:: NC_000023.11:g.102142123del, NC_000023.10:g.101397095del, NW_025791816.1:g.37213del, NW_004070884.1:g.13981del

Select item 14902818243.

rs1490281824 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:102143424 (GRCh38)
X:101398396 (GRCh37)
Canonical SPDI:: NC_000023.11:102143423:T:C
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.102143424T>C, NC_000023.10:g.101398396T>C, NW_025791816.1:g.38514T>C, NW_004070884.1:g.15282T>C

Select item 14898165354.

rs1489816535 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: X:102142780 (GRCh38)
X:101397752 (GRCh37)
Canonical SPDI:: NC_000023.11:102142779:GGG:GG
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0.000084/1 (ALFA)
-=0.000045/1 (TOMMO)
-=0.000048/5 (GnomAD)
-=0.000087/23 (TOPMED)
HGVS:: NC_000023.11:g.102142782del, NC_000023.10:g.101397754del, NW_025791816.1:g.37872del, NW_004070884.1:g.14640del

Select item 14897885675.

rs1489788567 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: X:102144023 (GRCh38)
X:101398995 (GRCh37)
Canonical SPDI:: NC_000023.11:102144022:T:G
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: 2KB_upstream_variant,500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.102144023T>G, NC_000023.10:g.101398995T>G, NW_025791816.1:g.39113T>G, NW_004070884.1:g.15881T>G

Select item 14895396766.

rs1489539676 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:102139719 (GRCh38)
X:101394691 (GRCh37)
Canonical SPDI:: NC_000023.11:102139718:C:G
Gene:: TCEAL6 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.102139719C>G, NC_000023.10:g.101394691C>G, NW_025791816.1:g.34808C>G, NW_004070884.1:g.11577C>G, NM_001006938.3:c.*1061G>C, NM_001367790.1:c.*1011G>C

Select item 14875210297.

rs1487521029 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: X:102142111 (GRCh38)
X:101397083 (GRCh37)
Canonical SPDI:: NC_000023.11:102142110:T:G
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.102142111T>G, NC_000023.10:g.101397083T>G, NW_025791816.1:g.37201T>G, NW_004070884.1:g.13969T>G

Select item 14864334808.

rs1486433480 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: X:102143309 (GRCh38)
X:101398281 (GRCh37)
Canonical SPDI:: NC_000023.11:102143308:A:T
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00001/1 (GnomAD)
T=0.000023/6 (TOPMED)
T=0.000315/4 (TOMMO)
T=0.001027/3 (KOREAN)
HGVS:: NC_000023.11:g.102143309A>T, NC_000023.10:g.101398281A>T, NW_025791816.1:g.38399A>T, NW_004070884.1:g.15167A>T

Select item 14857562579.

rs1485756257 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:102139499 (GRCh38)
X:101394471 (GRCh37)
Canonical SPDI:: NC_000023.11:102139498:G:A
Gene:: TCEAL6 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0.00014/2 (ALFA)
HGVS:: NC_000023.11:g.102139499G>A, NC_000023.10:g.101394471G>A, NW_025791816.1:g.34588G>A, NW_004070884.1:g.11357G>A, NM_001006938.3:c.*1281C>T, NM_001367790.1:c.*1231C>T

Select item 148555619110.

rs1485556191 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: X:102142776 (GRCh38)
X:101397748 (GRCh37)
Canonical SPDI:: NC_000023.11:102142775:G:T
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000084/1 (ALFA)
T=0.000039/4 (GnomAD)
T=0.000045/1 (TOMMO)
T=0.000208/1 (1000Genomes)
HGVS:: NC_000023.11:g.102142776G>T, NC_000023.10:g.101397748G>T, NW_025791816.1:g.37866G>T, NW_004070884.1:g.14634G>T

Select item 148528882311.

rs1485288823 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:102140104 (GRCh38)
X:101395076 (GRCh37)
Canonical SPDI:: NC_000023.11:102140103:T:C
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00007/1 (ALFA)
HGVS:: NC_000023.11:g.102140104T>C, NC_000023.10:g.101395076T>C, NW_025791816.1:g.35193T>C, NW_004070884.1:g.11962T>C, NM_001006938.3:c.*676A>G, NM_001006938.2:c.*676A>G, NM_001367790.1:c.*626A>G

Select item 148340089612.

rs1483400896 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:102139877 (GRCh38)
X:101394849 (GRCh37)
Canonical SPDI:: NC_000023.11:102139876:C:G
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000023.11:g.102139877C>G, NC_000023.10:g.101394849C>G, NW_025791816.1:g.34966C>G, NW_004070884.1:g.11735C>G, NM_001006938.3:c.*903G>C, NM_001367790.1:c.*853G>C

Select item 148332938413.

rs1483329384 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: X:102141395 (GRCh38)
X:101396367 (GRCh37)
Canonical SPDI:: NC_000023.11:102141394:G:C,NC_000023.11:102141394:G:T
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.102141395G>C, NC_000023.11:g.102141395G>T, NC_000023.10:g.101396367G>C, NC_000023.10:g.101396367G>T, NW_025791816.1:g.36485G>C, NW_025791816.1:g.36485G>T, NW_004070884.1:g.13253G>C, NW_004070884.1:g.13253G>T

Select item 148276934314.

rs1482769343 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:102141412 (GRCh38)
X:101396384 (GRCh37)
Canonical SPDI:: NC_000023.11:102141411:G:C
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.102141412G>C, NC_000023.10:g.101396384G>C, NW_025791816.1:g.36502G>C, NW_004070884.1:g.13270G>C

Select item 148273109715.

rs1482731097 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,T [Show Flanks]
Chromosome:: X:102142286 (GRCh38)
X:101397258 (GRCh37)
Canonical SPDI:: NC_000023.11:102142285:A:C,NC_000023.11:102142285:A:T
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.0003/9 (GnomAD)
C=0.01642/46 (KOREAN)
HGVS:: NC_000023.11:g.102142286A>C, NC_000023.11:g.102142286A>T, NC_000023.10:g.101397258A>C, NC_000023.10:g.101397258A>T, NW_025791816.1:g.37376A>C, NW_025791816.1:g.37376A>T, NW_004070884.1:g.14144A>C, NW_004070884.1:g.14144A>T

Select item 148235000116.

rs1482350001 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: X:102141832 (GRCh38)
X:101396804 (GRCh37)
Canonical SPDI:: NC_000023.11:102141831:G:T
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000019/2 (GnomAD)
HGVS:: NC_000023.11:g.102141832G>T, NC_000023.10:g.101396804G>T, NW_025791816.1:g.36922G>T, NW_004070884.1:g.13690G>T

Select item 148224854617.

rs1482248546 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:102142521 (GRCh38)
X:101397493 (GRCh37)
Canonical SPDI:: NC_000023.11:102142520:C:G
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000015/4 (TOPMED)
HGVS:: NC_000023.11:g.102142521C>G, NC_000023.10:g.101397493C>G, NW_025791816.1:g.37611C>G, NW_004070884.1:g.14379C>G

Select item 148143741218.

rs1481437412 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:102142261 (GRCh38)
X:101397233 (GRCh37)
Canonical SPDI:: NC_000023.11:102142260:C:G
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00003/3 (GnomAD)
G=0.000057/15 (TOPMED)
HGVS:: NC_000023.11:g.102142261C>G, NC_000023.10:g.101397233C>G, NW_025791816.1:g.37351C>G, NW_004070884.1:g.14119C>G

Select item 148133429619.

rs1481334296 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:102143049 (GRCh38)
X:101398021 (GRCh37)
Canonical SPDI:: NC_000023.11:102143048:C:T
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.102143049C>T, NC_000023.10:g.101398021C>T, NW_025791816.1:g.38139C>T, NW_004070884.1:g.14907C>T, XR_938472.4:n.138C>T, XR_938472.3:n.138C>T, XR_938472.2:n.138C>T, XR_938472.1:n.138C>T, XR_938471.3:n.104C>T, XR_938471.2:n.104C>T, XR_938471.1:n.104C>T, XR_007068283.1:n.138C>T, XR_007068282.1:n.97C>T

Select item 148080851620.

rs1480808516 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: X:102142213 (GRCh38)
X:101397185 (GRCh37)
Canonical SPDI:: NC_000023.11:102142212:C:A
Gene:: TCEAL6 (Varview), LOC105373299 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00242/34 (ALFA)
A=0.001873/9 (1000Genomes)
A=0.001901/194 (GnomAD)
A=0.002108/558 (TOPMED)
C=0.25/1 (SGDP_PRJ)
HGVS:: NC_000023.11:g.102142213C>A, NC_000023.10:g.101397185C>A, NW_025791816.1:g.37303C>A, NW_004070884.1:g.14071C>A