SNP Links for Gene (Select 164153) - SNP

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Select item 14914155341.

rs1491415534 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 1:110111764 (GRCh38)
1:110654387 (GRCh37)
Canonical SPDI:: NC_000001.11:110111764::C
Gene:: UBL4B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.00004/4 (GnomAD)
HGVS:: NC_000001.11:g.110111764_110111765insC, NC_000001.10:g.110654386_110654387insC

Select item 14910420802.

rs1491042080 [Homo sapiens]

Variant type:: DEL
Alleles:: CC>- [Show Flanks]
Chromosome:: 1:110111774 (GRCh38)
1:110654396 (GRCh37)
Canonical SPDI:: NC_000001.11:110111773:CC:
Gene:: UBL4B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000001.11:g.110111774_110111775del, NC_000001.10:g.110654396_110654397del

Select item 14909548753.

rs1490954875 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:110112603 (GRCh38)
1:110655225 (GRCh37)
Canonical SPDI:: NC_000001.11:110112602:A:G
Gene:: UBL4B (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000001.11:g.110112603A>G, NC_000001.10:g.110655225A>G, NM_203412.2:c.69A>G, NM_203412.1:c.69A>G

Select item 14904677974.

rs1490467797 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:110111052 (GRCh38)
1:110653674 (GRCh37)
Canonical SPDI:: NC_000001.11:110111051:A:G
Gene:: UBL4B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.110111052A>G, NC_000001.10:g.110653674A>G

Select item 14891146155.

rs1489114615 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 1:110111881 (GRCh38)
1:110654503 (GRCh37)
Canonical SPDI:: NC_000001.11:110111880:G:C,NC_000001.11:110111880:G:T
Gene:: UBL4B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000023/6 (TOPMED)
C=0.000071/1 (TOMMO)
HGVS:: NC_000001.11:g.110111881G>C, NC_000001.11:g.110111881G>T, NC_000001.10:g.110654503G>C, NC_000001.10:g.110654503G>T

Select item 14875512086.

rs1487551208 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:110113511 (GRCh38)
1:110656133 (GRCh37)
Canonical SPDI:: NC_000001.11:110113510:G:A
Gene:: UBL4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000108/2 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000021/3 (GnomAD)
A=0.000446/2 (Estonian)
HGVS:: NC_000001.11:g.110113511G>A, NC_000001.10:g.110656133G>A, NM_203412.2:c.*452G>A, NM_203412.1:c.*452G>A

Select item 14875456587.

rs1487545658 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:110111526 (GRCh38)
1:110654148 (GRCh37)
Canonical SPDI:: NC_000001.11:110111525:A:C
Gene:: UBL4B (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.110111526A>C, NC_000001.10:g.110654148A>C

Select item 14870862338.

rs1487086233 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:110112514 (GRCh38)
1:110655136 (GRCh37)
Canonical SPDI:: NC_000001.11:110112513:C:T
Gene:: UBL4B (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.110112514C>T, NC_000001.10:g.110655136C>T, NM_203412.2:c.-21C>T, NM_203412.1:c.-21C>T

Select item 14864891229.

rs1486489122 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:110112667 (GRCh38)
1:110655289 (GRCh37)
Canonical SPDI:: NC_000001.11:110112666:T:C
Gene:: UBL4B (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.110112667T>C, NC_000001.10:g.110655289T>C, NM_203412.2:c.133T>C, NM_203412.1:c.133T>C, NP_981957.1:p.Phe45Leu

Select item 148581873910.

rs1485818739 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:110113997 (GRCh38)
1:110656619 (GRCh37)
Canonical SPDI:: NC_000001.11:110113996:A:G
Gene:: UBL4B (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
G=0.000021/3 (GnomAD)
G=0.000071/1 (TOMMO)
HGVS:: NC_000001.11:g.110113997A>G, NC_000001.10:g.110656619A>G

Select item 148249383311.

rs1482493833 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:110112523 (GRCh38)
1:110655145 (GRCh37)
Canonical SPDI:: NC_000001.11:110112522:C:T
Gene:: UBL4B (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.110112523C>T, NC_000001.10:g.110655145C>T, NM_203412.2:c.-12C>T, NM_203412.1:c.-12C>T

Select item 148171018812.

rs1481710188 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:110110581 (GRCh38)
1:110653203 (GRCh37)
Canonical SPDI:: NC_000001.11:110110580:G:A
Gene:: UBL4B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00005/7 (GnomAD)
A=0.000147/39 (TOPMED)
HGVS:: NC_000001.11:g.110110581G>A, NC_000001.10:g.110653203G>A

Select item 148166628413.

rs1481666284 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:110111404 (GRCh38)
1:110654026 (GRCh37)
Canonical SPDI:: NC_000001.11:110111403:G:A,NC_000001.11:110111403:G:T
Gene:: UBL4B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000021/3 (GnomAD)
T=0.000071/1 (TOMMO)
A=0.000156/1 (1000Genomes)
HGVS:: NC_000001.11:g.110111404G>A, NC_000001.11:g.110111404G>T, NC_000001.10:g.110654026G>A, NC_000001.10:g.110654026G>T

Select item 148107280314.

rs1481072803 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:110113101 (GRCh38)
1:110655723 (GRCh37)
Canonical SPDI:: NC_000001.11:110113100:C:T
Gene:: UBL4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000224/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000223/1 (Estonian)
HGVS:: NC_000001.11:g.110113101C>T, NC_000001.10:g.110655723C>T, NM_203412.2:c.*42C>T, NM_203412.1:c.*42C>T

Select item 148077489315.

rs1480774893 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:110111747 (GRCh38)
1:110654369 (GRCh37)
Canonical SPDI:: NC_000001.11:110111746:C:A,NC_000001.11:110111746:C:T
Gene:: UBL4B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000008/1 (GnomAD)
HGVS:: NC_000001.11:g.110111747C>A, NC_000001.11:g.110111747C>T, NC_000001.10:g.110654369C>A, NC_000001.10:g.110654369C>T

Select item 148071039516.

rs1480710395 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:110112490 (GRCh38)
1:110655112 (GRCh37)
Canonical SPDI:: NC_000001.11:110112489:G:A
Gene:: UBL4B (Varview)
Functional Consequence:: 5_prime_UTR_variant
HGVS:: NC_000001.11:g.110112490G>A, NC_000001.10:g.110655112G>A, NM_203412.2:c.-45G>A, NM_203412.1:c.-45G>A

Select item 148063491617.

rs1480634916 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:110112879 (GRCh38)
1:110655501 (GRCh37)
Canonical SPDI:: NC_000001.11:110112878:G:A
Gene:: UBL4B (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.110112879G>A, NC_000001.10:g.110655501G>A, NM_203412.2:c.345G>A, NM_203412.1:c.345G>A

Select item 148014992118.

rs1480149921 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:110113796 (GRCh38)
1:110656418 (GRCh37)
Canonical SPDI:: NC_000001.11:110113795:C:T
Gene:: UBL4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.110113796C>T, NC_000001.10:g.110656418C>T, NM_203412.2:c.*737C>T, NM_203412.1:c.*737C>T

Select item 147877841419.

rs1478778414 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:110112004 (GRCh38)
1:110654626 (GRCh37)
Canonical SPDI:: NC_000001.11:110112003:A:T
Gene:: UBL4B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.110112004A>T, NC_000001.10:g.110654626A>T

Select item 147761328220.

rs1477613282 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:110111305 (GRCh38)
1:110653927 (GRCh37)
Canonical SPDI:: NC_000001.11:110111304:C:T
Gene:: UBL4B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.110111305C>T, NC_000001.10:g.110653927C>T

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