SNP Links for Gene (Select 1844) - SNP

Links from Gene

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Select item 14907564041.

rs1490756404 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 2:96145141 (GRCh38)
2:96810880 (GRCh37)
Canonical SPDI:: NC_000002.12:96145140:G:A,NC_000002.12:96145140:G:C
Gene:: DUSP2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.96145141G>A, NC_000002.12:g.96145141G>C, NC_000002.11:g.96810880G>A, NC_000002.11:g.96810880G>C, NM_004418.4:c.214C>T, NM_004418.4:c.214C>G, NM_004418.3:c.214C>T, NM_004418.3:c.214C>G, XM_017003546.2:c.214C>T, XM_017003546.2:c.214C>G, XM_017003546.1:c.214C>T, XM_017003546.1:c.214C>G, NP_004409.1:p.Pro72Ser, NP_004409.1:p.Pro72Ala, XP_016859035.1:p.Pro72Ser, XP_016859035.1:p.Pro72Ala

Select item 14902999102.

rs1490299910 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:96144605 (GRCh38)
2:96810344 (GRCh37)
Canonical SPDI:: NC_000002.12:96144604:A:G
Gene:: DUSP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.96144605A>G, NC_000002.11:g.96810344A>G

Select item 14902849943.

rs1490284994 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 2:96143567 (GRCh38)
2:96809306 (GRCh37)
Canonical SPDI:: NC_000002.12:96143566:G:C
Gene:: DUSP2 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.96143567G>C, NC_000002.11:g.96809306G>C, NM_004418.4:c.*256C>G, NM_004418.3:c.*256C>G, XM_017003546.2:c.*256C>G, XM_017003546.1:c.*256C>G

Select item 14897866714.

rs1489786671 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:96143738 (GRCh38)
2:96809477 (GRCh37)
Canonical SPDI:: NC_000002.12:96143737:G:A
Gene:: DUSP2 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.96143738G>A, NC_000002.11:g.96809477G>A, NM_004418.4:c.*85C>T, NM_004418.3:c.*85C>T, XM_017003546.2:c.*85C>T, XM_017003546.1:c.*85C>T

Select item 14894876465.

rs1489487646 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:96145220 (GRCh38)
2:96810959 (GRCh37)
Canonical SPDI:: NC_000002.12:96145219:G:A
Gene:: DUSP2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.0004/1 (GnomAD_exomes)
HGVS:: NC_000002.12:g.96145220G>A, NC_000002.11:g.96810959G>A, NM_004418.4:c.135C>T, NM_004418.3:c.135C>T, XM_017003546.2:c.135C>T, XM_017003546.1:c.135C>T

Select item 14888455556.

rs1488845555 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:96145320 (GRCh38)
2:96811059 (GRCh37)
Canonical SPDI:: NC_000002.12:96145319:G:A
Gene:: DUSP2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.96145320G>A, NC_000002.11:g.96811059G>A, NM_004418.4:c.35C>T, NM_004418.3:c.35C>T, XM_017003546.2:c.35C>T, XM_017003546.1:c.35C>T, NP_004409.1:p.Ala12Val, XP_016859035.1:p.Ala12Val

Select item 14887862937.

rs1488786293 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 2:96145066 (GRCh38)
2:96810805 (GRCh37)
Canonical SPDI:: NC_000002.12:96145065:A:C
Gene:: DUSP2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000002.12:g.96145066A>C, NC_000002.11:g.96810805A>C, NM_004418.4:c.289T>G, NM_004418.3:c.289T>G, XM_017003546.2:c.289T>G, XM_017003546.1:c.289T>G, NP_004409.1:p.Ser97Ala, XP_016859035.1:p.Ser97Ala

Select item 14882377128.

rs1488237712 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 2:96146107 (GRCh38)
2:96811846 (GRCh37)
Canonical SPDI:: NC_000002.12:96146106:C:A,NC_000002.12:96146106:C:G
Gene:: DUSP2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.96146107C>A, NC_000002.12:g.96146107C>G, NC_000002.11:g.96811846C>A, NC_000002.11:g.96811846C>G

Select item 14875984849.

rs1487598484 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 2:96143022 (GRCh38)
2:96808761 (GRCh37)
Canonical SPDI:: NC_000002.12:96143021:A:T
Gene:: DUSP2 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.96143022A>T, NC_000002.11:g.96808761A>T

Select item 148667195710.

rs1486671957 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:96146967 (GRCh38)
2:96812706 (GRCh37)
Canonical SPDI:: NC_000002.12:96146966:C:T
Gene:: DUSP2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.96146967C>T, NC_000002.11:g.96812706C>T

Select item 148632606311.

rs1486326063 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:96144032 (GRCh38)
2:96809771 (GRCh37)
Canonical SPDI:: NC_000002.12:96144031:C:T
Gene:: DUSP2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000002.12:g.96144032C>T, NC_000002.11:g.96809771C>T, NM_004418.4:c.736G>A, NM_004418.3:c.736G>A, XM_017003546.2:c.820G>A, XM_017003546.1:c.820G>A, NP_004409.1:p.Val246Met, XP_016859035.1:p.Val274Met

Select item 148627590412.

rs1486275904 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:96144914 (GRCh38)
2:96810653 (GRCh37)
Canonical SPDI:: NC_000002.12:96144913:G:A
Gene:: DUSP2 (Varview)
Functional Consequence:: intron_variant,synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.96144914G>A, NC_000002.11:g.96810653G>A, XM_017003546.2:c.441C>T, XM_017003546.1:c.441C>T

Select item 148561337913.

rs1485613379 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:96144018 (GRCh38)
2:96809757 (GRCh37)
Canonical SPDI:: NC_000002.12:96144017:T:C
Gene:: DUSP2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000002.12:g.96144018T>C, NC_000002.11:g.96809757T>C, NM_004418.4:c.750A>G, NM_004418.3:c.750A>G, XM_017003546.2:c.834A>G, XM_017003546.1:c.834A>G

Select item 148503658214.

rs1485036582 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 2:96147462 (GRCh38)
2:96813201 (GRCh37)
Canonical SPDI:: NC_000002.12:96147461:T:A,NC_000002.12:96147461:T:C
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.96147462T>A, NC_000002.12:g.96147462T>C, NC_000002.11:g.96813201T>A, NC_000002.11:g.96813201T>C

Select item 148492626315.

rs1484926263 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:96146938 (GRCh38)
2:96812677 (GRCh37)
Canonical SPDI:: NC_000002.12:96146937:A:G
Gene:: DUSP2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.96146938A>G, NC_000002.11:g.96812677A>G

Select item 148244627916.

rs1482446279 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 2:96143136 (GRCh38)
2:96808875 (GRCh37)
Canonical SPDI:: NC_000002.12:96143135:C:A,NC_000002.12:96143135:C:T
Gene:: DUSP2 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000002.12:g.96143136C>A, NC_000002.12:g.96143136C>T, NC_000002.11:g.96808875C>A, NC_000002.11:g.96808875C>T

Select item 148205012517.

rs1482050125 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:96143103 (GRCh38)
2:96808842 (GRCh37)
Canonical SPDI:: NC_000002.12:96143102:A:G
Gene:: DUSP2 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000224/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000223/1 (Estonian)
HGVS:: NC_000002.12:g.96143103A>G, NC_000002.11:g.96808842A>G

Select item 148151764718.

rs1481517647 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 2:96143237 (GRCh38)
2:96808976 (GRCh37)
Canonical SPDI:: NC_000002.12:96143236:G:C
Gene:: DUSP2 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.96143237G>C, NC_000002.11:g.96808976G>C, NM_004418.4:c.*586C>G, NM_004418.3:c.*586C>G, XM_017003546.2:c.*586C>G, XM_017003546.1:c.*586C>G

Select item 148127334619.

rs1481273346 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:96145748 (GRCh38)
2:96811487 (GRCh37)
Canonical SPDI:: NC_000002.12:96145747:C:T
Gene:: DUSP2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.96145748C>T, NC_000002.11:g.96811487C>T

Select item 148030577120.

rs1480305771 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 2:96144706 (GRCh38)
2:96810445 (GRCh37)
Canonical SPDI:: NC_000002.12:96144705:G:A,NC_000002.12:96144705:G:C
Gene:: DUSP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000002.12:g.96144706G>A, NC_000002.12:g.96144706G>C, NC_000002.11:g.96810445G>A, NC_000002.11:g.96810445G>C

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