SNP Links for Gene (Select 219432) - SNP

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Select item 14903417991.

rs1490341799 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>- [Show Flanks]
Chromosome:: 11:55663471 (GRCh38)
11:55430947 (GRCh37)
Canonical SPDI:: NC_000011.10:55663469:ATA:A
Gene:: OR4C6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
-=0.000023/6 (TOPMED)
-=0.000031/4 (GnomAD)
HGVS:: NC_000011.10:g.55663471_55663472del, NC_000011.9:g.55430947_55430948del

Select item 14899884212.

rs1489988421 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:55666131 (GRCh38)
11:55433607 (GRCh37)
Canonical SPDI:: NC_000011.10:55666130:G:A,NC_000011.10:55666130:G:C
Gene:: OR4C6 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by cluster
MAF:: A=0.000005/1 (GnomAD_exomes)
C=0.000035/1 (TOMMO)
HGVS:: NC_000011.10:g.55666131G>A, NC_000011.10:g.55666131G>C, NC_000011.9:g.55433607G>A, NC_000011.9:g.55433607G>C

Select item 14896066903.

rs1489606690 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:55666395 (GRCh38)
11:55433871 (GRCh37)
Canonical SPDI:: NC_000011.10:55666394:G:A
Gene:: OR4C6 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000671/3 (ALFA)
A=0.000014/2 (GnomAD)
A=0.00067/3 (Estonian)
HGVS:: NC_000011.10:g.55666395G>A, NC_000011.9:g.55433871G>A

Select item 14892745564.

rs1489274556 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:55665538 (GRCh38)
11:55433014 (GRCh37)
Canonical SPDI:: NC_000011.10:55665537:C:G,NC_000011.10:55665537:C:T
Gene:: OR4C6 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.55665538C>G, NC_000011.10:g.55665538C>T, NC_000011.9:g.55433014C>G, NC_000011.9:g.55433014C>T, NM_001004704.2:c.372C>G, NM_001004704.2:c.372C>T, NM_001004704.1:c.372C>G, NM_001004704.1:c.372C>T, NP_001004704.1:p.Ile124Met

Select item 14885501475.

rs1488550147 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:55665887 (GRCh38)
11:55433363 (GRCh37)
Canonical SPDI:: NC_000011.10:55665886:C:T
Gene:: OR4C6 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: T=0.000047/1 (ALFA)
T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.55665887C>T, NC_000011.9:g.55433363C>T, NM_001004704.2:c.721C>T, NM_001004704.1:c.721C>T, NP_001004704.1:p.His241Tyr

Select item 14883522586.

rs1488352258 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:55664460 (GRCh38)
11:55431936 (GRCh37)
Canonical SPDI:: NC_000011.10:55664459:T:C
Gene:: OR4C6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.55664460T>C, NC_000011.9:g.55431936T>C

Select item 14876920637.

rs1487692063 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:55665572 (GRCh38)
11:55433048 (GRCh37)
Canonical SPDI:: NC_000011.10:55665571:C:T
Gene:: OR4C6 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.55665572C>T, NC_000011.9:g.55433048C>T, NM_001004704.2:c.406C>T, NM_001004704.1:c.406C>T, NP_001004704.1:p.Pro136Ser

Select item 14874220978.

rs1487422097 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:55666536 (GRCh38)
11:55434012 (GRCh37)
Canonical SPDI:: NC_000011.10:55666535:T:G
Gene:: OR4C6 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000142/2 (ALFA)
G=0.000023/6 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000011.10:g.55666536T>G, NC_000011.9:g.55434012T>G

Select item 14860016679.

rs1486001667 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:55664797 (GRCh38)
11:55432273 (GRCh37)
Canonical SPDI:: NC_000011.10:55664796:T:C
Gene:: OR4C6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.55664797T>C, NC_000011.9:g.55432273T>C

Select item 148571872810.

rs1485718728 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 11:55666332 (GRCh38)
11:55433808 (GRCh37)
Canonical SPDI:: NC_000011.10:55666331:C:A,NC_000011.10:55666331:C:T
Gene:: OR4C6 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.55666332C>A, NC_000011.10:g.55666332C>T, NC_000011.9:g.55433808C>A, NC_000011.9:g.55433808C>T

Select item 148547313311.

rs1485473133 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 11:55664848 (GRCh38)
11:55432324 (GRCh37)
Canonical SPDI:: NC_000011.10:55664847:A:C
Gene:: OR4C6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000029/4 (GnomAD)
HGVS:: NC_000011.10:g.55664848A>C, NC_000011.9:g.55432324A>C

Select item 148434310212.

rs1484343102 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:55665059 (GRCh38)
11:55432535 (GRCh37)
Canonical SPDI:: NC_000011.10:55665058:C:T
Gene:: OR4C6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.55665059C>T, NC_000011.9:g.55432535C>T

Select item 148431368413.

rs1484313684 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:55665395 (GRCh38)
11:55432871 (GRCh37)
Canonical SPDI:: NC_000011.10:55665394:C:G
Gene:: OR4C6 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.55665395C>G, NC_000011.9:g.55432871C>G, NM_001004704.2:c.229C>G, NM_001004704.1:c.229C>G, NP_001004704.1:p.Pro77Ala

Select item 148106400814.

rs1481064008 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:55665273 (GRCh38)
11:55432749 (GRCh37)
Canonical SPDI:: NC_000011.10:55665272:C:T
Gene:: OR4C6 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000011.10:g.55665273C>T, NC_000011.9:g.55432749C>T, NM_001004704.2:c.107C>T, NM_001004704.1:c.107C>T, NP_001004704.1:p.Thr36Ile

Select item 148101575415.

rs1481015754 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:55664450 (GRCh38)
11:55431926 (GRCh37)
Canonical SPDI:: NC_000011.10:55664449:C:A
Gene:: OR4C6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.55664450C>A, NC_000011.9:g.55431926C>A

Select item 148005672616.

rs1480056726 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:55664128 (GRCh38)
11:55431604 (GRCh37)
Canonical SPDI:: NC_000011.10:55664127:T:C
Gene:: OR4C6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.55664128T>C, NC_000011.9:g.55431604T>C

Select item 147974643517.

rs1479746435 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:55666078 (GRCh38)
11:55433554 (GRCh37)
Canonical SPDI:: NC_000011.10:55666077:G:A
Gene:: OR4C6 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.55666078G>A, NC_000011.9:g.55433554G>A, NM_001004704.2:c.912G>A, NM_001004704.1:c.912G>A

Select item 147958569418.

rs1479585694 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:55663812 (GRCh38)
11:55431288 (GRCh37)
Canonical SPDI:: NC_000011.10:55663811:G:A
Gene:: OR4C6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000016/2 (GnomAD)
HGVS:: NC_000011.10:g.55663812G>A, NC_000011.9:g.55431288G>A

Select item 147945756119.

rs1479457561 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:55666149 (GRCh38)
11:55433625 (GRCh37)
Canonical SPDI:: NC_000011.10:55666148:G:T
Gene:: OR4C6 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.001092/2 (Korea1K)
T=0.001557/26 (TOMMO)
HGVS:: NC_000011.10:g.55666149G>T, NC_000011.9:g.55433625G>T

Select item 147899339120.

rs1478993391 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 11:55664855 (GRCh38)
11:55432331 (GRCh37)
Canonical SPDI:: NC_000011.10:55664854:C:A,NC_000011.10:55664854:C:G
Gene:: OR4C6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000011.10:g.55664855C>A, NC_000011.10:g.55664855C>G, NC_000011.9:g.55432331C>A, NC_000011.9:g.55432331C>G

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