SNP Links for Gene (Select 219487) - SNP

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Links from Gene

Items: 1 to 20 of 949

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Select item 14899514841.

rs1489951484 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:56542301 (GRCh38)
11:56309777 (GRCh37)
Canonical SPDI:: NC_000011.10:56542300:A:G
Gene:: OR5M11 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.56542301A>G, NC_000011.9:g.56309777A>G

Select item 14875831392.

rs1487583139 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:56544142 (GRCh38)
11:56311618 (GRCh37)
Canonical SPDI:: NC_000011.10:56544141:A:G
Gene:: OR5M11 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.56544142A>G, NC_000011.9:g.56311618A>G

Select item 14864644823.

rs1486464482 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:56541988 (GRCh38)
11:56309464 (GRCh37)
Canonical SPDI:: NC_000011.10:56541987:C:A
Gene:: OR5M11 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0.0002/1 (ALFA)
A=0.0002/1 (Estonian)
HGVS:: NC_000011.10:g.56541988C>A, NC_000011.9:g.56309464C>A

Select item 14862982584.

rs1486298258 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:56544886 (GRCh38)
11:56312362 (GRCh37)
Canonical SPDI:: NC_000011.10:56544885:A:T
Gene:: OR5M11 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.56544886A>T, NC_000011.9:g.56312362A>T

Select item 14843346685.

rs1484334668 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:56543984 (GRCh38)
11:56311460 (GRCh37)
Canonical SPDI:: NC_000011.10:56543983:A:G
Gene:: OR5M11 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000021/3 (GnomAD)
G=0.00003/8 (TOPMED)
HGVS:: NC_000011.10:g.56543984A>G, NC_000011.9:g.56311460A>G

Select item 14835654526.

rs1483565452 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:56542300 (GRCh38)
11:56309776 (GRCh37)
Canonical SPDI:: NC_000011.10:56542299:T:C
Gene:: OR5M11 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency
MAF:: C=0.000006/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.56542300T>C, NC_000011.9:g.56309776T>C

Select item 14826994837.

rs1482699483 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:56544411 (GRCh38)
11:56311887 (GRCh37)
Canonical SPDI:: NC_000011.10:56544410:T:G
Gene:: OR5M11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.56544411T>G, NC_000011.9:g.56311887T>G

Select item 14818613928.

rs1481861392 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 11:56542203 (GRCh38)
11:56309679 (GRCh37)
Canonical SPDI:: NC_000011.10:56542202:C:
Gene:: OR5M11 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.000071/1 (ALFA)
-=0.000057/8 (GnomAD)
-=0.00006/16 (TOPMED)
HGVS:: NC_000011.10:g.56542203del, NC_000011.9:g.56309679del

Select item 14796874769.

rs1479687476 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:56542419 (GRCh38)
11:56309895 (GRCh37)
Canonical SPDI:: NC_000011.10:56542418:A:G
Gene:: OR5M11 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.56542419A>G, NC_000011.9:g.56309895A>G, NM_001005245.1:c.839T>C, NP_001005245.1:p.Val280Ala

Select item 147955868510.

rs1479558685 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:56544662 (GRCh38)
11:56312138 (GRCh37)
Canonical SPDI:: NC_000011.10:56544661:T:C
Gene:: OR5M11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000019/5 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000011.10:g.56544662T>C, NC_000011.9:g.56312138T>C

Select item 147897473211.

rs1478974732 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:56543751 (GRCh38)
11:56311227 (GRCh37)
Canonical SPDI:: NC_000011.10:56543750:T:C
Gene:: OR5M11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.56543751T>C, NC_000011.9:g.56311227T>C

Select item 147770537312.

rs1477705373 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:56541943 (GRCh38)
11:56309419 (GRCh37)
Canonical SPDI:: NC_000011.10:56541942:T:C
Gene:: OR5M11 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.56541943T>C, NC_000011.9:g.56309419T>C

Select item 147731957913.

rs1477319579 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:56543487 (GRCh38)
11:56310963 (GRCh37)
Canonical SPDI:: NC_000011.10:56543486:T:C
Gene:: OR5M11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.56543487T>C, NC_000011.9:g.56310963T>C

Select item 147706834014.

rs1477068340 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:56545116 (GRCh38)
11:56312592 (GRCh37)
Canonical SPDI:: NC_000011.10:56545115:G:A
Gene:: OR5M11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.56545116G>A, NC_000011.9:g.56312592G>A

Select item 147664046515.

rs1476640465 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:56543192 (GRCh38)
11:56310668 (GRCh37)
Canonical SPDI:: NC_000011.10:56543191:T:G
Gene:: OR5M11 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000132/2 (ALFA)
G=0.000029/4 (GnomAD)
G=0.000446/2 (Estonian)
HGVS:: NC_000011.10:g.56543192T>G, NC_000011.9:g.56310668T>G, NM_001005245.1:c.66A>C, NP_001005245.1:p.Glu22Asp

Select item 147510903516.

rs1475109035 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:56545241 (GRCh38)
11:56312717 (GRCh37)
Canonical SPDI:: NC_000011.10:56545240:G:A,NC_000011.10:56545240:G:C
Gene:: OR5M11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000011.10:g.56545241G>A, NC_000011.10:g.56545241G>C, NC_000011.9:g.56312717G>A, NC_000011.9:g.56312717G>C

Select item 147427776517.

rs1474277765 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:56542060 (GRCh38)
11:56309536 (GRCh37)
Canonical SPDI:: NC_000011.10:56542059:A:G
Gene:: OR5M11 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.56542060A>G, NC_000011.9:g.56309536A>G

Select item 147375872218.

rs1473758722 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TGTA [Show Flanks]
Chromosome:: 11:56544113 (GRCh38)
11:56311590 (GRCh37)
Canonical SPDI:: NC_000011.10:56544113:TGTA:TGTATGTA
Gene:: OR5M11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: TGTATGTA=0./0 (ALFA)
HGVS:: NC_000011.10:g.56544114_56544117dup, NC_000011.9:g.56311590_56311593dup

Select item 147271564419.

rs1472715644 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 11:56544868 (GRCh38)
11:56312344 (GRCh37)
Canonical SPDI:: NC_000011.10:56544867:A:C
Gene:: OR5M11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000042/11 (TOPMED)
HGVS:: NC_000011.10:g.56544868A>C, NC_000011.9:g.56312344A>C

Select item 147096210120.

rs1470962101 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:56542273 (GRCh38)
11:56309749 (GRCh37)
Canonical SPDI:: NC_000011.10:56542272:G:A
Gene:: OR5M11 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.56542273G>A, NC_000011.9:g.56309749G>A

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