SNP Links for Gene (Select 219960) - SNP

Links from Gene

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Select item 14909326071.

rs1490932607 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:58229147 (GRCh38)
11:57996619 (GRCh37)
Canonical SPDI:: NC_000011.10:58229146:T:C
Gene:: OR10Q1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.000084/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.58229147T>C, NC_000011.9:g.57996619T>C

Select item 14905065222.

rs1490506522 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:58229787 (GRCh38)
11:57997259 (GRCh37)
Canonical SPDI:: NC_000011.10:58229786:A:G
Gene:: OR10Q1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.58229787A>G, NC_000011.9:g.57997259A>G

Select item 14899768723.

rs1489976872 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 11:58228578 (GRCh38)
11:57996050 (GRCh37)
Canonical SPDI:: NC_000011.10:58228577:C:A,NC_000011.10:58228577:C:T
Gene:: OR10Q1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,stop_gained
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.58228578C>A, NC_000011.10:g.58228578C>T, NC_000011.9:g.57996050C>A, NC_000011.9:g.57996050C>T, NM_001004471.2:c.298G>T, NM_001004471.2:c.298G>A, NP_001004471.1:p.Gly100Ter, NP_001004471.1:p.Gly100Arg

Select item 14879512024.

rs1487951202 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:58230909 (GRCh38)
11:57998381 (GRCh37)
Canonical SPDI:: NC_000011.10:58230908:A:G
Gene:: OR10Q1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000011.10:g.58230909A>G, NC_000011.9:g.57998381A>G

Select item 14878120575.

rs1487812057 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:58228048 (GRCh38)
11:57995520 (GRCh37)
Canonical SPDI:: NC_000011.10:58228047:G:C
Gene:: OR10Q1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.58228048G>C, NC_000011.9:g.57995520G>C, NM_001004471.2:c.828C>G, NP_001004471.1:p.Asp276Glu

Select item 14877530916.

rs1487753091 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:58228630 (GRCh38)
11:57996102 (GRCh37)
Canonical SPDI:: NC_000011.10:58228629:T:C
Gene:: OR10Q1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.58228630T>C, NC_000011.9:g.57996102T>C, NM_001004471.2:c.246A>G

Select item 14873936067.

rs1487393606 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 11:58228401 (GRCh38)
11:57995873 (GRCh37)
Canonical SPDI:: NC_000011.10:58228400:G:C,NC_000011.10:58228400:G:T
Gene:: OR10Q1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.58228401G>C, NC_000011.10:g.58228401G>T, NC_000011.9:g.57995873G>C, NC_000011.9:g.57995873G>T, NM_001004471.2:c.475C>G, NM_001004471.2:c.475C>A, NP_001004471.1:p.Pro159Ala, NP_001004471.1:p.Pro159Thr

Select item 14863571888.

rs1486357188 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:58230177 (GRCh38)
11:57997649 (GRCh37)
Canonical SPDI:: NC_000011.10:58230176:T:C
Gene:: OR10Q1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.00007/1 (ALFA)
HGVS:: NC_000011.10:g.58230177T>C, NC_000011.9:g.57997649T>C

Select item 14830583409.

rs1483058340 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:58228456 (GRCh38)
11:57995928 (GRCh37)
Canonical SPDI:: NC_000011.10:58228455:C:A
Gene:: OR10Q1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000011.10:g.58228456C>A, NC_000011.9:g.57995928C>A, NM_001004471.2:c.420G>T, NP_001004471.1:p.Met140Ile

Select item 148265085210.

rs1482650852 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 11:58227519 (GRCh38)
11:57994991 (GRCh37)
Canonical SPDI:: NC_000011.10:58227518:A:C,NC_000011.10:58227518:A:G
Gene:: OR10Q1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.58227519A>C, NC_000011.10:g.58227519A>G, NC_000011.9:g.57994991A>C, NC_000011.9:g.57994991A>G

Select item 147906562211.

rs1479065622 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:58227492 (GRCh38)
11:57994964 (GRCh37)
Canonical SPDI:: NC_000011.10:58227491:A:G
Gene:: OR10Q1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.58227492A>G, NC_000011.9:g.57994964A>G

Select item 147847938112.

rs1478479381 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:58228783 (GRCh38)
11:57996255 (GRCh37)
Canonical SPDI:: NC_000011.10:58228782:G:C
Gene:: OR10Q1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000056/2 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000014/2 (GnomAD)
C=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.58228783G>C, NC_000011.9:g.57996255G>C, NM_001004471.2:c.93C>G

Select item 147759587813.

rs1477595878 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:58228250 (GRCh38)
11:57995722 (GRCh37)
Canonical SPDI:: NC_000011.10:58228249:A:T
Gene:: OR10Q1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000008/2 (GnomAD_exomes)
T=0.000035/1 (TOMMO)
HGVS:: NC_000011.10:g.58228250A>T, NC_000011.9:g.57995722A>T, NM_001004471.2:c.626T>A, NP_001004471.1:p.Ile209Asn

Select item 147728331314.

rs1477283313 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:58229775 (GRCh38)
11:57997247 (GRCh37)
Canonical SPDI:: NC_000011.10:58229774:T:C
Gene:: OR10Q1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.58229775T>C, NC_000011.9:g.57997247T>C

Select item 147722134315.

rs1477221343 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:58229329 (GRCh38)
11:57996801 (GRCh37)
Canonical SPDI:: NC_000011.10:58229328:G:A
Gene:: OR10Q1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.58229329G>A, NC_000011.9:g.57996801G>A

Select item 147697735616.

rs1476977356 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 11:58228353 (GRCh38)
11:57995825 (GRCh37)
Canonical SPDI:: NC_000011.10:58228352:G:C,NC_000011.10:58228352:G:T
Gene:: OR10Q1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by cluster
MAF:: T=0.00014/2 (TOMMO)
HGVS:: NC_000011.10:g.58228353G>C, NC_000011.10:g.58228353G>T, NC_000011.9:g.57995825G>C, NC_000011.9:g.57995825G>T, NM_001004471.2:c.523C>G, NM_001004471.2:c.523C>A, NP_001004471.1:p.His175Asp, NP_001004471.1:p.His175Asn

Select item 147331628717.

rs1473316287 [Homo sapiens]

Variant type:: DELINS
Alleles:: CA>- [Show Flanks]
Chromosome:: 11:58227877 (GRCh38)
11:57995349 (GRCh37)
Canonical SPDI:: NC_000011.10:58227873:ACACA:ACA
Gene:: OR10Q1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: ACA=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.58227875CA[1], NC_000011.9:g.57995347CA[1]

Select item 147159858618.

rs1471598586 [Homo sapiens]

Variant type:: DELINS
Alleles:: TCA>- [Show Flanks]
Chromosome:: 11:58230901 (GRCh38)
11:57998373 (GRCh37)
Canonical SPDI:: NC_000011.10:58230896:ATCATCA:ATCA
Gene:: OR10Q1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATCA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.58230898TCA[1], NC_000011.9:g.57998370TCA[1]

Select item 146989303519.

rs1469893035 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:58228301 (GRCh38)
11:57995773 (GRCh37)
Canonical SPDI:: NC_000011.10:58228300:A:G
Gene:: OR10Q1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.58228301A>G, NC_000011.9:g.57995773A>G, NM_001004471.2:c.575T>C, NP_001004471.1:p.Leu192Pro

Select item 146828030120.

rs1468280301 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:58228695 (GRCh38)
11:57996167 (GRCh37)
Canonical SPDI:: NC_000011.10:58228694:T:C
Gene:: OR10Q1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.58228695T>C, NC_000011.9:g.57996167T>C, NM_001004471.2:c.181A>G, NP_001004471.1:p.Thr61Ala

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