SNP Links for Gene (Select 219965) - SNP

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Select item 14902676761.

rs1490267676 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:58359559 (GRCh38)
11:58127032 (GRCh37)
Canonical SPDI:: NC_000011.10:58359558:G:C
Gene:: OR5B17 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.58359559G>C, NC_000011.9:g.58127032G>C

Select item 14889112962.

rs1488911296 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:58358489 (GRCh38)
11:58125962 (GRCh37)
Canonical SPDI:: NC_000011.10:58358488:T:C
Gene:: OR5B17 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000224/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000223/1 (Estonian)
HGVS:: NC_000011.10:g.58358489T>C, NC_000011.9:g.58125962T>C, NM_001005489.2:c.581A>G, NM_001005489.1:c.581A>G, NP_001005489.1:p.Glu194Gly

Select item 14881407423.

rs1488140742 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:58360002 (GRCh38)
11:58127475 (GRCh37)
Canonical SPDI:: NC_000011.10:58360001:T:G
Gene:: OR5B17 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.58360002T>G, NC_000011.9:g.58127475T>G

Select item 14874548414.

rs1487454841 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:58360660 (GRCh38)
11:58128133 (GRCh37)
Canonical SPDI:: NC_000011.10:58360659:C:A
Gene:: OR5B17 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.58360660C>A, NC_000011.9:g.58128133C>A

Select item 14871595855.

rs1487159585 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:58359372 (GRCh38)
11:58126845 (GRCh37)
Canonical SPDI:: NC_000011.10:58359371:G:A
Gene:: OR5B17 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.58359372G>A, NC_000011.9:g.58126845G>A

Select item 14866990036.

rs1486699003 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:58360471 (GRCh38)
11:58127944 (GRCh37)
Canonical SPDI:: NC_000011.10:58360470:C:T
Gene:: OR5B17 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000035/1 (TOMMO)
HGVS:: NC_000011.10:g.58360471C>T, NC_000011.9:g.58127944C>T

Select item 14834636347.

rs1483463634 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 11:58360361 (GRCh38)
11:58127834 (GRCh37)
Canonical SPDI:: NC_000011.10:58360360:C:A,NC_000011.10:58360360:C:T
Gene:: OR5B17 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
A=0.000342/1 (KOREAN)
HGVS:: NC_000011.10:g.58360361C>A, NC_000011.10:g.58360361C>T, NC_000011.9:g.58127834C>A, NC_000011.9:g.58127834C>T

Select item 14831610728.

rs1483161072 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 11:58358439 (GRCh38)
11:58125912 (GRCh37)
Canonical SPDI:: NC_000011.10:58358438:C:A,NC_000011.10:58358438:C:T
Gene:: OR5B17 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000011.10:g.58358439C>A, NC_000011.10:g.58358439C>T, NC_000011.9:g.58125912C>A, NC_000011.9:g.58125912C>T, NM_001005489.2:c.631G>T, NM_001005489.2:c.631G>A, NM_001005489.1:c.631G>T, NM_001005489.1:c.631G>A, NP_001005489.1:p.Val211Phe, NP_001005489.1:p.Val211Ile

Select item 14831006659.

rs1483100665 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:58358374 (GRCh38)
11:58125847 (GRCh37)
Canonical SPDI:: NC_000011.10:58358373:G:A
Gene:: OR5B17 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.58358374G>A, NC_000011.9:g.58125847G>A, NM_001005489.2:c.696C>T, NM_001005489.1:c.696C>T

Select item 148274522210.

rs1482745222 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:58358721 (GRCh38)
11:58126194 (GRCh37)
Canonical SPDI:: NC_000011.10:58358720:C:T
Gene:: OR5B17 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.58358721C>T, NC_000011.9:g.58126194C>T, NM_001005489.2:c.349G>A, NM_001005489.1:c.349G>A, NP_001005489.1:p.Ala117Thr

Select item 148093808311.

rs1480938083 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>- [Show Flanks]
Chromosome:: 11:58360244 (GRCh38)
11:58127717 (GRCh37)
Canonical SPDI:: NC_000011.10:58360241:TTTT:TT
Gene:: OR5B17 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: TTTT=0.000071/1 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.58360244_58360245del, NC_000011.9:g.58127717_58127718del

Select item 147867820012.

rs1478678200 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:58358041 (GRCh38)
11:58125514 (GRCh37)
Canonical SPDI:: NC_000011.10:58358040:A:G
Gene:: OR5B17 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.58358041A>G, NC_000011.9:g.58125514A>G

Select item 147786243513.

rs1477862435 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:58360837 (GRCh38)
11:58128310 (GRCh37)
Canonical SPDI:: NC_000011.10:58360836:T:C
Gene:: OR5B17 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.58360837T>C, NC_000011.9:g.58128310T>C

Select item 147770575514.

rs1477705755 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:58360103 (GRCh38)
11:58127576 (GRCh37)
Canonical SPDI:: NC_000011.10:58360102:A:G
Gene:: OR5B17 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
G=0.000071/2 (TOMMO)
HGVS:: NC_000011.10:g.58360103A>G, NC_000011.9:g.58127576A>G

Select item 147670761715.

rs1476707617 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:58358178 (GRCh38)
11:58125651 (GRCh37)
Canonical SPDI:: NC_000011.10:58358177:C:T
Gene:: OR5B17 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by cluster
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.58358178C>T, NC_000011.9:g.58125651C>T, NM_001005489.2:c.892G>A, NM_001005489.1:c.892G>A, NP_001005489.1:p.Ala298Thr

Select item 147656880216.

rs1476568802 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:58359248 (GRCh38)
11:58126721 (GRCh37)
Canonical SPDI:: NC_000011.10:58359247:G:A
Gene:: OR5B17 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.58359248G>A, NC_000011.9:g.58126721G>A

Select item 147612866517.

rs1476128665 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:58358468 (GRCh38)
11:58125941 (GRCh37)
Canonical SPDI:: NC_000011.10:58358467:G:A
Gene:: OR5B17 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0.000028/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.58358468G>A, NC_000011.9:g.58125941G>A, NM_001005489.2:c.602C>T, NM_001005489.1:c.602C>T, NP_001005489.1:p.Ser201Leu

Select item 147563930918.

rs1475639309 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 11:58359626 (GRCh38)
11:58127099 (GRCh37)
Canonical SPDI:: NC_000011.10:58359625:GGG:GG
Gene:: OR5B17 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0.000071/1 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.58359628del, NC_000011.9:g.58127101del

Select item 147363582719.

rs1473635827 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:58357771 (GRCh38)
11:58125244 (GRCh37)
Canonical SPDI:: NC_000011.10:58357770:C:T
Gene:: OR5B17 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.58357771C>T, NC_000011.9:g.58125244C>T

Select item 147281591420.

rs1472815914 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:58357627 (GRCh38)
11:58125100 (GRCh37)
Canonical SPDI:: NC_000011.10:58357626:C:T
Gene:: OR5B17 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.58357627C>T, NC_000011.9:g.58125100C>T

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