Links from Gene
Items: 1 to 20 of 1000
1.
rs1491014724 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->AGACACTTGACATTTAGCCCTTG
[Show Flanks]
- Chromosome:
- 16:30055012
(GRCh38)
16:30066334
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30055012:TGAGACACTTGACATTTAGCCCTTG:TGAGACACTTGACATTTAGCCCTTGAGACACTTGACATTTAGCCCTTG
- Gene:
- TLCD3B (Varview), LOC112694756 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
TGAGACACTTGACATTTAGCCCTTGAGACACTTGACATTTAGCCCTTG=0./0
(
ALFA)
TGAGACACTTGACATTTAGCCCT=0.00002/1
(GnomAD)
- HGVS:
2.
rs1491010005 has merged into rs148169757 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTTTTTTTT>-,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 16:30061559
(GRCh38)
16:30072880
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:30061548:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- LOC112694756 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTT=0./0
(
ALFA)
-=0.000015/4
(TOPMED)
-=0.325/13
(GENOME_DK)
- HGVS:
NC_000016.10:g.30061559_30061577del, NC_000016.10:g.30061561_30061577del, NC_000016.10:g.30061562_30061577del, NC_000016.10:g.30061563_30061577del, NC_000016.10:g.30061564_30061577del, NC_000016.10:g.30061565_30061577del, NC_000016.10:g.30061566_30061577del, NC_000016.10:g.30061567_30061577del, NC_000016.10:g.30061568_30061577del, NC_000016.10:g.30061569_30061577del, NC_000016.10:g.30061570_30061577del, NC_000016.10:g.30061571_30061577del, NC_000016.10:g.30061572_30061577del, NC_000016.10:g.30061573_30061577del, NC_000016.10:g.30061574_30061577del, NC_000016.10:g.30061576_30061577del, NC_000016.10:g.30061577del, NC_000016.10:g.30061577dup, NC_000016.10:g.30061576_30061577dup, NC_000016.10:g.30061575_30061577dup, NC_000016.10:g.30061574_30061577dup, NC_000016.10:g.30061573_30061577dup, NC_000016.10:g.30061572_30061577dup, NC_000016.10:g.30061571_30061577dup, NC_000016.10:g.30061570_30061577dup, NC_000016.10:g.30061569_30061577dup, NC_000016.10:g.30061567_30061577dup, NC_000016.9:g.30072880_30072898del, NC_000016.9:g.30072882_30072898del, NC_000016.9:g.30072883_30072898del, NC_000016.9:g.30072884_30072898del, NC_000016.9:g.30072885_30072898del, NC_000016.9:g.30072886_30072898del, NC_000016.9:g.30072887_30072898del, NC_000016.9:g.30072888_30072898del, NC_000016.9:g.30072889_30072898del, NC_000016.9:g.30072890_30072898del, NC_000016.9:g.30072891_30072898del, NC_000016.9:g.30072892_30072898del, NC_000016.9:g.30072893_30072898del, NC_000016.9:g.30072894_30072898del, NC_000016.9:g.30072895_30072898del, NC_000016.9:g.30072897_30072898del, NC_000016.9:g.30072898del, NC_000016.9:g.30072898dup, NC_000016.9:g.30072897_30072898dup, NC_000016.9:g.30072896_30072898dup, NC_000016.9:g.30072895_30072898dup, NC_000016.9:g.30072894_30072898dup, NC_000016.9:g.30072893_30072898dup, NC_000016.9:g.30072892_30072898dup, NC_000016.9:g.30072891_30072898dup, NC_000016.9:g.30072890_30072898dup, NC_000016.9:g.30072888_30072898dup, NG_008010.1:g.13390_13408del, NG_008010.1:g.13392_13408del, NG_008010.1:g.13393_13408del, NG_008010.1:g.13394_13408del, NG_008010.1:g.13395_13408del, NG_008010.1:g.13396_13408del, NG_008010.1:g.13397_13408del, NG_008010.1:g.13398_13408del, NG_008010.1:g.13399_13408del, NG_008010.1:g.13400_13408del, NG_008010.1:g.13401_13408del, NG_008010.1:g.13402_13408del, NG_008010.1:g.13403_13408del, NG_008010.1:g.13404_13408del, NG_008010.1:g.13405_13408del, NG_008010.1:g.13407_13408del, NG_008010.1:g.13408del, NG_008010.1:g.13408dup, NG_008010.1:g.13407_13408dup, NG_008010.1:g.13406_13408dup, NG_008010.1:g.13405_13408dup, NG_008010.1:g.13404_13408dup, NG_008010.1:g.13403_13408dup, NG_008010.1:g.13402_13408dup, NG_008010.1:g.13401_13408dup, NG_008010.1:g.13400_13408dup, NG_008010.1:g.13398_13408dup
3.
rs1490975384 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->TGC
[Show Flanks]
- Chromosome:
- 16:30065067
(GRCh38)
16:30076389
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30065067:GCTGC:GCTGCTGC
- Gene:
- ALDOA (Varview), LOC112694756 (Varview)
- Functional Consequence:
- upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GCTGCTGC=0.000071/1
(
ALFA)
GCT=0.000015/4
(TOPMED)
GCT=0.000029/4
(GnomAD)
- HGVS:
4.
rs1490157904 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 16:30064711
(GRCh38)
16:30076032
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30064710:T:G
- Gene:
- ALDOA (Varview), LOC112694756 (Varview)
- Functional Consequence:
- upstream_transcript_variant,5_prime_UTR_variant,intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
5.
rs1490115310 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>T
[Show Flanks]
- Chromosome:
- 16:30056129
(GRCh38)
16:30067450
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30056128:A:T
- Gene:
- LOC112694756 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0.00184/8
(
ALFA)
T=0.00131/37
(TOMMO)
- HGVS:
6.
rs1489993578 has merged into rs757632824 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- A>-,AA
[Show Flanks]
- Chromosome:
- 16:30064282
(GRCh38)
16:30075603
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30064281:AAAAAAAA:AAAAAAA,NC_000016.10:30064281:AAAAAAAA:AAAAAAAAA
- Gene:
- ALDOA (Varview), LOC112694756 (Varview)
- Functional Consequence:
- intron_variant,5_prime_UTR_variant,upstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAA=0.00011/2
(
ALFA)
-=0.00022/1
(Estonian)
-=0.00062/4
(1000Genomes)
- HGVS:
7.
rs1489986893 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 16:30059112
(GRCh38)
16:30070433
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30059111:G:C
- Gene:
- LOC112694756 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000007/1
(GnomAD)
- HGVS:
8.
rs1489769247 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 16:30057466
(GRCh38)
16:30068787
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30057465:T:G
- Gene:
- LOC112694756 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
- HGVS:
9.
rs1489631773 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 16:30070315
(GRCh38)
16:30081636
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30070314:T:G
- Gene:
- ALDOA (Varview), LOC112694756 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0.000084/1
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
NC_000016.10:g.30070315T>G, NC_000016.9:g.30081636T>G, NG_008010.1:g.22146T>G, NM_184041.5:c.*103T>G, NM_184041.4:c.*103T>G, NM_184041.3:c.*103T>G, NM_184041.2:c.*103T>G, NM_001243177.4:c.*103T>G, NM_001243177.3:c.*103T>G, NM_001243177.2:c.*103T>G, NM_001243177.1:c.*103T>G, NM_001127617.2:c.*103T>G, NM_184043.2:c.*103T>G, NM_000034.3:c.*103T>G, NM_001365307.2:c.*1707T>G, NM_001365307.1:c.*1707T>G, NM_001365305.2:c.*1707T>G, NM_001365305.1:c.*1707T>G, NM_001365304.2:c.*1707T>G, NM_001365304.1:c.*1707T>G, NM_001355564.1:c.*103T>G, NM_001355562.1:c.*103T>G, NM_001243175.1:c.*103T>G, NM_001355563.1:c.*103T>G, NM_001355565.1:c.*103T>G
10.
rs1489568273 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 16:30052861
(GRCh38)
16:30064182
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30052860:G:A
- Gene:
- TLCD3B (Varview), LOC112694756 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,5_prime_UTR_variant,upstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
- HGVS:
NC_000016.10:g.30052861G>A, NC_000016.9:g.30064182G>A, NG_008010.1:g.4692G>A, XM_005255613.4:c.-381C>T, XM_005255613.3:c.-381C>T, XM_005255613.2:c.-381C>T, XM_005255613.1:c.-381C>T, XM_005255614.4:c.-321C>T, XM_005255614.3:c.-321C>T, XM_005255614.2:c.-321C>T, XM_005255614.1:c.-321C>T, XM_017023751.2:c.-474C>T, XM_017023751.1:c.-474C>T, XM_017023752.2:c.-377C>T, XM_017023752.1:c.-377C>T, XM_047434736.1:c.-317C>T
11.
rs1489338201 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 16:30053064
(GRCh38)
16:30064385
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30053063:A:G
- Gene:
- TLCD3B (Varview), LOC112694756 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000029/4
(GnomAD)
G=0.000038/10
(TOPMED)
- HGVS:
12.
rs1489166311 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 16:30068651
(GRCh38)
16:30079972
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30068650:C:T
- Gene:
- ALDOA (Varview), LOC112694756 (Varview)
- Functional Consequence:
- coding_sequence_variant,3_prime_UTR_variant,synonymous_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000008/2
(TOPMED)
T=0.000014/2
(GnomAD)
- HGVS:
NC_000016.10:g.30068651C>T, NC_000016.9:g.30079972C>T, NG_008010.1:g.20482C>T, NM_184041.5:c.330C>T, NM_184041.4:c.330C>T, NM_184041.3:c.330C>T, NM_184041.2:c.330C>T, NM_001243177.4:c.492C>T, NM_001243177.3:c.492C>T, NM_001243177.2:c.492C>T, NM_001243177.1:c.492C>T, NM_001127617.2:c.330C>T, NM_184043.2:c.330C>T, NM_000034.3:c.330C>T, NM_001365307.2:c.*839C>T, NM_001365307.1:c.*839C>T, NM_001365305.2:c.*839C>T, NM_001365305.1:c.*839C>T, NM_001365304.2:c.*839C>T, NM_001365304.1:c.*839C>T, NM_001355564.1:c.330C>T, NM_001355562.1:c.330C>T, NM_001243175.1:c.330C>T, NM_001355563.1:c.330C>T, NM_001355565.1:c.330C>T
13.
rs1489141037 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 16:30052196
(GRCh38)
16:30063517
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30052195:C:G,NC_000016.10:30052195:C:T
- Gene:
- TLCD3B (Varview), LOC112694756 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.00031/5
(
ALFA)
T=0.00014/2
(TOMMO)
T=0.00062/4
(1000Genomes)
T=0.00112/5
(Estonian)
T=0.00684/20
(KOREAN)
- HGVS:
14.
rs1489115126 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 16:30056944
(GRCh38)
16:30068265
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30056943:C:G,NC_000016.10:30056943:C:T
- Gene:
- LOC112694756 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
T=0.000008/1
(GnomAD)
- HGVS:
15.
rs1489111746 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>T
[Show Flanks]
- Chromosome:
- 16:30070043
(GRCh38)
16:30081364
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30070042:G:T
- Gene:
- ALDOA (Varview), LOC112694756 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.000071/1
(
ALFA)
T=0.000004/1
(GnomAD_exomes)
T=0.000011/3
(TOPMED)
- HGVS:
16.
rs1488828979 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 16:30059530
(GRCh38)
16:30070851
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30059529:C:A
- Gene:
- LOC112694756 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
17.
rs1488807885 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 16:30053080
(GRCh38)
16:30064401
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30053079:G:A
- Gene:
- TLCD3B (Varview), LOC112694756 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency
- MAF:
A=0.000007/1
(GnomAD)
- HGVS:
18.
rs1488590734 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 16:30063347
(GRCh38)
16:30074668
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30063346:C:G
- Gene:
- ALDOA (Varview), LOC112694756 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000015/4
(TOPMED)
- HGVS:
19.
rs1488542479 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>T
[Show Flanks]
- Chromosome:
- 16:30061591
(GRCh38)
16:30072912
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30061590:G:T
- Gene:
- LOC112694756 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.01144/51
(
ALFA)
T=0.00025/7
(TOMMO)
T=0.01052/47
(Estonian)
- HGVS:
20.
rs1488398566 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
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- Chromosome:
- 16:30068511
(GRCh38)
16:30079832
(GRCh37)
- Canonical SPDI:
- NC_000016.10:30068510:G:A
- Gene:
- ALDOA (Varview), LOC112694756 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency
- MAF:
A=0.000007/1
(GnomAD)
- HGVS: