SNP Links for Gene (Select 22869) - SNP

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Select item 14914340941.

rs1491434094 has merged into rs34111911 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTT>-,T,TT,TTT,TTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 9:96778540 (GRCh38)
9:99540822 (GRCh37)
Canonical SPDI:: NC_000009.12:96778527:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000009.12:96778527:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000009.12:96778527:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000009.12:96778527:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000009.12:96778527:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000009.12:96778527:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000009.12:96778527:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000009.12:96778527:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000009.12:96778527:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000009.12:96778527:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:96778527:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:96778527:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:96778527:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: ZNF510 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000009.12:g.96778540_96778544del, NC_000009.12:g.96778541_96778544del, NC_000009.12:g.96778542_96778544del, NC_000009.12:g.96778543_96778544del, NC_000009.12:g.96778544del, NC_000009.12:g.96778544dup, NC_000009.12:g.96778543_96778544dup, NC_000009.12:g.96778542_96778544dup, NC_000009.12:g.96778541_96778544dup, NC_000009.12:g.96778540_96778544dup, NC_000009.12:g.96778538_96778544dup, NC_000009.12:g.96778537_96778544dup, NC_000009.12:g.96778535_96778544dup, NC_000009.11:g.99540822_99540826del, NC_000009.11:g.99540823_99540826del, NC_000009.11:g.99540824_99540826del, NC_000009.11:g.99540825_99540826del, NC_000009.11:g.99540826del, NC_000009.11:g.99540826dup, NC_000009.11:g.99540825_99540826dup, NC_000009.11:g.99540824_99540826dup, NC_000009.11:g.99540823_99540826dup, NC_000009.11:g.99540822_99540826dup, NC_000009.11:g.99540820_99540826dup, NC_000009.11:g.99540819_99540826dup, NC_000009.11:g.99540817_99540826dup

Select item 14914250362.

rs1491425036 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 9:96778528 (GRCh38)
9:99540811 (GRCh37)
Canonical SPDI:: NC_000009.12:96778528::G
Gene:: ZNF510 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.00093/11 (ALFA)
G=0.00252/39 (TOMMO)
G=0.00552/472 (GnomAD)
HGVS:: NC_000009.12:g.96778528_96778529insG, NC_000009.11:g.99540810_99540811insG

Select item 14912491233.

rs1491249123 [Homo sapiens]

Variant type:: INS
Alleles:: ->C,T,TAT [Show Flanks]
Chromosome:: 9:96770612 (GRCh38)
9:99532895 (GRCh37)
Canonical SPDI:: NC_000009.12:96770612::C,NC_000009.12:96770612::T,NC_000009.12:96770612::TAT
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TAT=0.00013/2 (ALFA)
T=0.00011/2 (TOMMO)
T=0.00667/4 (NorthernSweden)
HGVS:: NC_000009.12:g.96770612_96770613insC, NC_000009.12:g.96770612_96770613insT, NC_000009.12:g.96770612_96770613insTAT, NC_000009.11:g.99532894_99532895insC, NC_000009.11:g.99532894_99532895insT, NC_000009.11:g.99532894_99532895insTAT

Select item 14912264874.

rs1491226487 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 9:96771433 (GRCh38)
9:99533716 (GRCh37)
Canonical SPDI:: NC_000009.12:96771433::C
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.96771433_96771434insC, NC_000009.11:g.99533715_99533716insC

Select item 14908807495.

rs1490880749 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:96763491 (GRCh38)
9:99525773 (GRCh37)
Canonical SPDI:: NC_000009.12:96763490:T:C
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000043/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
C=0.000013/3 (GnomAD_exomes)
HGVS:: NC_000009.12:g.96763491T>C, NC_000009.11:g.99525773T>C

Select item 14908020646.

rs1490802064 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:96771510 (GRCh38)
9:99533792 (GRCh37)
Canonical SPDI:: NC_000009.12:96771509:T:C
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.96771510T>C, NC_000009.11:g.99533792T>C

Select item 14907138047.

rs1490713804 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ATT [Show Flanks]
Chromosome:: 9:96766338 (GRCh38)
9:99528621 (GRCh37)
Canonical SPDI:: NC_000009.12:96766338:TATT:TATTATT
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATTATT=0.001096/13 (ALFA)
TAT=0.001326/165 (GnomAD)
HGVS:: NC_000009.12:g.96766340_96766342dup, NC_000009.11:g.99528622_99528624dup

Select item 14907000398.

rs1490700039 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:96772681 (GRCh38)
9:99534963 (GRCh37)
Canonical SPDI:: NC_000009.12:96772680:T:C
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.96772681T>C, NC_000009.11:g.99534963T>C

Select item 14906631549.

rs1490663154 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 9:96764575 (GRCh38)
9:99526857 (GRCh37)
Canonical SPDI:: NC_000009.12:96764574:A:T
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.96764575A>T, NC_000009.11:g.99526857A>T

Select item 149063021610.

rs1490630216 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:96756827 (GRCh38)
9:99519109 (GRCh37)
Canonical SPDI:: NC_000009.12:96756826:G:A
Gene:: ZNF510 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000009.12:g.96756827G>A, NC_000009.11:g.99519109G>A, NM_014930.3:c.*1951C>T, NM_014930.2:c.*1951C>T, NM_014930.1:c.*1951C>T, XM_005251808.3:c.*1951C>T, XM_005251808.2:c.*1951C>T, XM_011518393.3:c.*1951C>T, XM_011518393.2:c.*1951C>T, XM_011518393.1:c.*1951C>T, NM_001314059.2:c.*1951C>T, NM_001314059.1:c.*1951C>T, XM_017014483.2:c.*1951C>T, XM_017014483.1:c.*1951C>T, NM_001314060.2:c.*1951C>T, NM_001314060.1:c.*1951C>T, XM_047423005.1:c.*1951C>T

Select item 149046064011.

rs1490460640 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 9:96765446 (GRCh38)
9:99527728 (GRCh37)
Canonical SPDI:: NC_000009.12:96765445:G:A,NC_000009.12:96765445:G:C,NC_000009.12:96765445:G:T
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
A=0.000283/5 (TOMMO)
HGVS:: NC_000009.12:g.96765446G>A, NC_000009.12:g.96765446G>C, NC_000009.12:g.96765446G>T, NC_000009.11:g.99527728G>A, NC_000009.11:g.99527728G>C, NC_000009.11:g.99527728G>T

Select item 149044633912.

rs1490446339 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:96779775 (GRCh38)
9:99542057 (GRCh37)
Canonical SPDI:: NC_000009.12:96779774:T:C
Gene:: ZNF510 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000023/6 (TOPMED)
C=0.000029/4 (GnomAD)
HGVS:: NC_000009.12:g.96779775T>C, NC_000009.11:g.99542057T>C

Select item 149033645313.

rs1490336453 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:96766285 (GRCh38)
9:99528567 (GRCh37)
Canonical SPDI:: NC_000009.12:96766284:T:C
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000015/4 (TOPMED)
HGVS:: NC_000009.12:g.96766285T>C, NC_000009.11:g.99528567T>C

Select item 149028328514.

rs1490283285 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 9:96780253 (GRCh38)
9:99542535 (GRCh37)
Canonical SPDI:: NC_000009.12:96780252:CC:C
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0./0 (ALFA)
-=0.000014/2 (GnomAD)
-=0.000023/6 (TOPMED)
HGVS:: NC_000009.12:g.96780254del, NC_000009.11:g.99542536del

Select item 148989581915.

rs1489895819 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:96767144 (GRCh38)
9:99529426 (GRCh37)
Canonical SPDI:: NC_000009.12:96767143:A:G
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000009.12:g.96767144A>G, NC_000009.11:g.99529426A>G

Select item 148986095016.

rs1489860950 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 9:96765430 (GRCh38)
9:99527713 (GRCh37)
Canonical SPDI:: NC_000009.12:96765430:T:TT
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.96765431dup, NC_000009.11:g.99527713dup

Select item 148984457217.

rs1489844572 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:96765311 (GRCh38)
9:99527593 (GRCh37)
Canonical SPDI:: NC_000009.12:96765310:A:G
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.96765311A>G, NC_000009.11:g.99527593A>G

Select item 148983552918.

rs1489835529 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:96772580 (GRCh38)
9:99534862 (GRCh37)
Canonical SPDI:: NC_000009.12:96772579:T:C
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.96772580T>C, NC_000009.11:g.99534862T>C

Select item 148981259419.

rs1489812594 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:96757255 (GRCh38)
9:99519537 (GRCh37)
Canonical SPDI:: NC_000009.12:96757254:T:C
Gene:: ZNF510 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.96757255T>C, NC_000009.11:g.99519537T>C, NM_014930.3:c.*1523A>G, NM_014930.2:c.*1523A>G, NM_014930.1:c.*1523A>G, XM_005251808.3:c.*1523A>G, XM_005251808.2:c.*1523A>G, XM_011518393.3:c.*1523A>G, XM_011518393.2:c.*1523A>G, XM_011518393.1:c.*1523A>G, NM_001314059.2:c.*1523A>G, NM_001314059.1:c.*1523A>G, XM_017014483.2:c.*1523A>G, XM_017014483.1:c.*1523A>G, NM_001314060.2:c.*1523A>G, NM_001314060.1:c.*1523A>G, XM_047423005.1:c.*1523A>G

Select item 148972615420.

rs1489726154 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 9:96762467 (GRCh38)
9:99524749 (GRCh37)
Canonical SPDI:: NC_000009.12:96762466:C:A
Gene:: ZNF510 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000009.12:g.96762467C>A, NC_000009.11:g.99524749C>A

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