SNP Links for Gene (Select 2528) - SNP

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Select item 14915381841.

rs1491538184 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 19:5840323 (GRCh38)
19:5840334 (GRCh37)
Canonical SPDI:: NC_000019.10:5840322:CA:
Gene:: FUT6 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0.00464/55 (ALFA)
-=0.00172/48 (TOMMO)
HGVS:: NC_000019.10:g.5840323_5840324del, NC_000019.9:g.5840334_5840335del, NG_007505.1:g.4408_4409del, NW_025791810.1:g.13922dup, NW_025791810.1:g.13900del

Select item 14909609642.

rs1490960964 [Homo sapiens]

Variant type:: DEL
Alleles:: T>- [Show Flanks]
Chromosome:: 19:5836656 (GRCh38)
19:5836667 (GRCh37)
Canonical SPDI:: NC_000019.10:5836655:T:
Gene:: FUT6 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000019/5 (TOPMED)
-=0.000029/4 (GnomAD)
HGVS:: NC_000019.10:g.5836656del, NC_000019.9:g.5836667del, NG_007505.1:g.8076del, NW_025791810.1:g.10233del

Select item 14909051613.

rs1490905161 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:5837722 (GRCh38)
19:5837733 (GRCh37)
Canonical SPDI:: NC_000019.10:5837721:C:T
Gene:: FUT6 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.5837722C>T, NC_000019.9:g.5837733C>T, NG_007505.1:g.7010G>A, NW_025791810.1:g.11299C>T

Select item 14907725034.

rs1490772503 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:5837649 (GRCh38)
19:5837660 (GRCh37)
Canonical SPDI:: NC_000019.10:5837648:C:A
Gene:: FUT6 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.5837649C>A, NC_000019.9:g.5837660C>A, NG_007505.1:g.7083G>T, NW_025791810.1:g.11226C>A

Select item 14906220935.

rs1490622093 [Homo sapiens]

Variant type:: DELINS
Alleles:: GGGACCGATAGGAGGGAGAATAGGCAGGCG>- [Show Flanks]
Chromosome:: 19:5834266 (GRCh38)
19:5834277 (GRCh37)
Canonical SPDI:: NC_000019.10:5834264:GGGGACCGATAGGAGGGAGAATAGGCAGGCG:G
Gene:: FUT6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: -=0.00004/1 (TOMMO)
-=0.00408/33 (GnomAD)
HGVS:: NC_000019.10:g.5834266_5834295del, NC_000019.9:g.5834277_5834306del, NG_007505.1:g.10438_10467del, NW_025791810.1:g.7843G[4]ACCG[1], NW_025791810.1:g.7844_7866del

Select item 14906064026.

rs1490606402 [Homo sapiens]

Variant type:: DEL
Alleles:: AAAAA>- [Show Flanks]
Chromosome:: 19:5836534 (GRCh38)
19:5836545 (GRCh37)
Canonical SPDI:: NC_000019.10:5836533:AAAAA:
Gene:: FUT6 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.5836534_5836538del, NC_000019.9:g.5836545_5836549del, NG_007505.1:g.8194_8198del, NW_025791810.1:g.10111_10115del

Select item 14902758077.

rs1490275807 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:5838514 (GRCh38)
19:5838525 (GRCh37)
Canonical SPDI:: NC_000019.10:5838513:C:T
Gene:: FUT6 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000036/5 (GnomAD)
HGVS:: NC_000019.10:g.5838514C>T, NC_000019.9:g.5838525C>T, NG_007505.1:g.6218G>A, NW_025791810.1:g.12091C>T

Select item 14902101098.

rs1490210109 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 19:5840354 (GRCh38)
19:5840365 (GRCh37)
Canonical SPDI:: NC_000019.10:5840353:T:G
Gene:: FUT6 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.5840354T>G, NC_000019.9:g.5840365T>G, NG_007505.1:g.4378A>C, NW_025791810.1:g.13929T>G

Select item 14900339219.

rs1490033921 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 19:5830330 (GRCh38)
19:5830341 (GRCh37)
Canonical SPDI:: NC_000019.10:5830329:A:G,NC_000019.10:5830329:A:T
Gene:: FUT6 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.5830330A>G, NC_000019.10:g.5830330A>T, NC_000019.9:g.5830341A>G, NC_000019.9:g.5830341A>T, NG_007505.1:g.14402T>C, NG_007505.1:g.14402T>A, NW_025791810.1:g.3931A>G, NW_025791810.1:g.3931A>T

Select item 148976415510.

rs1489764155 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 19:5836231 (GRCh38)
19:5836242 (GRCh37)
Canonical SPDI:: NC_000019.10:5836230:T:C,NC_000019.10:5836230:T:G
Gene:: FUT6 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.01095/32 (KOREAN)
T=0.5/1 (SGDP_PRJ)
HGVS:: NC_000019.10:g.5836231T>C, NC_000019.10:g.5836231T>G, NC_000019.9:g.5836242T>C, NC_000019.9:g.5836242T>G, NG_007505.1:g.8501A>G, NG_007505.1:g.8501A>C, NW_025791810.1:g.9808T>C, NW_025791810.1:g.9808T>G

Select item 148973557011.

rs1489735570 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:5837308 (GRCh38)
19:5837319 (GRCh37)
Canonical SPDI:: NC_000019.10:5837307:G:T
Gene:: FUT6 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.5837308G>T, NC_000019.9:g.5837319G>T, NG_007505.1:g.7424C>A, NW_025791810.1:g.10885G>T

Select item 148950050212.

rs1489500502 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 19:5833443 (GRCh38)
19:5833454 (GRCh37)
Canonical SPDI:: NC_000019.10:5833442:C:G,NC_000019.10:5833442:C:T
Gene:: FUT6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000324/6 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000015/2 (GnomAD)
G=0.000354/6 (TOMMO)
G=0.001339/6 (Estonian)
HGVS:: NC_000019.10:g.5833443C>G, NC_000019.10:g.5833443C>T, NC_000019.9:g.5833454C>G, NC_000019.9:g.5833454C>T, NG_007505.1:g.11289G>C, NG_007505.1:g.11289G>A, NW_025791810.1:g.7046C>G, NW_025791810.1:g.7046C>T

Select item 148949572313.

rs1489495723 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:5832819 (GRCh38)
19:5832830 (GRCh37)
Canonical SPDI:: NC_000019.10:5832818:C:G
Gene:: FUT6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000029/4 (GnomAD)
G=0.01/6 (NorthernSweden)
HGVS:: NC_000019.10:g.5832819C>G, NC_000019.9:g.5832830C>G, NG_007505.1:g.11913G>C, NW_025791810.1:g.6422C>G

Select item 148932429614.

rs1489324296 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:5841602 (GRCh38)
19:5841613 (GRCh37)
Canonical SPDI:: NC_000019.10:5841601:C:T
Gene:: FUT6 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000019.10:g.5841602C>T, NC_000019.9:g.5841613C>T, NG_007482.2:g.20521G>A, NW_025791810.1:g.15181C>T, NG_007505.1:g.3130G>A

Select item 148925215215.

rs1489252152 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:5834490 (GRCh38)
19:5834501 (GRCh37)
Canonical SPDI:: NC_000019.10:5834489:G:A
Gene:: FUT6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.5834490G>A, NC_000019.9:g.5834501G>A, NG_007505.1:g.10242C>T, NW_025791810.1:g.8061G>A

Select item 148913049216.

rs1489130492 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:5831742 (GRCh38)
19:5831753 (GRCh37)
Canonical SPDI:: NC_000019.10:5831741:T:C
Gene:: FUT6 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.5831742T>C, NC_000019.9:g.5831753T>C, NG_007505.1:g.12990A>G, NM_000150.4:c.826A>G, NM_000150.3:c.826A>G, NM_000150.2:c.826A>G, NM_001040701.2:c.826A>G, NM_001040701.1:c.826A>G, NM_001369505.1:c.826A>G, NM_001369504.1:c.826A>G, NM_001381956.1:c.826A>G, NM_001381958.1:c.826A>G, NM_001381955.1:c.826A>G, NM_001369502.1:c.826A>G, NM_001381959.1:c.826A>G, NM_001381957.1:c.826A>G, NW_025791810.1:g.5345T>C, XM_047438555.1:c.826A>G, XM_047438558.1:c.826A>G, XM_047438561.1:c.826A>G, XM_047438556.1:c.826A>G, XM_047438557.1:c.826A>G, XM_047438560.1:c.826A>G, XM_047438559.1:c.826A>G, XM_047438553.1:c.826A>G, XM_047438554.1:c.826A>G, NP_000141.1:p.Ser276Gly, NP_001035791.1:p.Ser276Gly, NP_001356434.1:p.Ser276Gly, NP_001356433.1:p.Ser276Gly, NP_001368885.1:p.Ser276Gly, NP_001368887.1:p.Ser276Gly, NP_001368884.1:p.Ser276Gly, NP_001356431.1:p.Ser276Gly, NP_001368888.1:p.Ser276Gly, NP_001368886.1:p.Ser276Gly, XP_047294511.1:p.Ser276Gly, XP_047294514.1:p.Ser276Gly, XP_047294517.1:p.Ser276Gly, XP_047294512.1:p.Ser276Gly, XP_047294513.1:p.Ser276Gly, XP_047294516.1:p.Ser276Gly, XP_047294515.1:p.Ser276Gly, XP_047294509.1:p.Ser276Gly, XP_047294510.1:p.Ser276Gly

Select item 148882793417.

rs1488827934 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 19:5840570 (GRCh38)
19:5840581 (GRCh37)
Canonical SPDI:: NC_000019.10:5840569:C:A,NC_000019.10:5840569:C:T
Gene:: FUT6 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.00137/4 (KOREAN)
A=0.00212/36 (TOMMO)
HGVS:: NC_000019.10:g.5840570C>A, NC_000019.10:g.5840570C>T, NC_000019.9:g.5840581C>A, NC_000019.9:g.5840581C>T, NG_007505.1:g.4162G>T, NG_007505.1:g.4162G>A, NW_025791810.1:g.14145C>A, NW_025791810.1:g.14145C>T

Select item 148881667418.

rs1488816674 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 19:5835201 (GRCh38)
19:5835212 (GRCh37)
Canonical SPDI:: NC_000019.10:5835200:C:G,NC_000019.10:5835200:C:T
Gene:: FUT6 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000019.10:g.5835201C>G, NC_000019.10:g.5835201C>T, NC_000019.9:g.5835212C>G, NC_000019.9:g.5835212C>T, NG_007505.1:g.9531G>C, NG_007505.1:g.9531G>A, NW_025791810.1:g.8768C>G, NW_025791810.1:g.8768C>T

Select item 148878193319.

rs1488781933 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:5835872 (GRCh38)
19:5835883 (GRCh37)
Canonical SPDI:: NC_000019.10:5835871:G:A
Gene:: FUT6 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00014/2 (TOMMO)
HGVS:: NC_000019.10:g.5835872G>A, NC_000019.9:g.5835883G>A, NG_007505.1:g.8860C>T, NW_025791810.1:g.9439G>A

Select item 148875162420.

rs1488751624 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:5836750 (GRCh38)
19:5836761 (GRCh37)
Canonical SPDI:: NC_000019.10:5836749:C:G
Gene:: FUT6 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.5836750C>G, NC_000019.9:g.5836761C>G, NG_007505.1:g.7982G>C, NW_025791810.1:g.10327C>G