Links from Gene
Items: 1 to 20 of 9143
1.
rs1491554578 has merged into rs34021337 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CACACACACACACACACA>-,CA,CACA,CACACA,CACACACA,CACACACACA,CACACACACACA,CACACACACACACA,CACACACACACACACA,CACACACACACACACACACA,CACACACACACACACACACACA,CACACACACACACACACACACACA,CACACACACACACACACACACACACA,CACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACA
[Show Flanks]
- Chromosome:
- 3:186455909
(GRCh38)
3:186173698
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACA,NC_000003.12:186455889:ACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACA
- Gene:
- LINC02052 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACACACACACACACACACACA=0./0
(
ALFA)
-=0.06305/243
(ALSPAC)
-=0.13099/656
(1000Genomes)
- HGVS:
NC_000003.12:g.186455891CA[9], NC_000003.12:g.186455891CA[10], NC_000003.12:g.186455891CA[11], NC_000003.12:g.186455891CA[12], NC_000003.12:g.186455891CA[13], NC_000003.12:g.186455891CA[14], NC_000003.12:g.186455891CA[15], NC_000003.12:g.186455891CA[16], NC_000003.12:g.186455891CA[17], NC_000003.12:g.186455891CA[19], NC_000003.12:g.186455891CA[20], NC_000003.12:g.186455891CA[21], NC_000003.12:g.186455891CA[22], NC_000003.12:g.186455891CA[23], NC_000003.12:g.186455891CA[24], NC_000003.11:g.186173680CA[9], NC_000003.11:g.186173680CA[10], NC_000003.11:g.186173680CA[11], NC_000003.11:g.186173680CA[12], NC_000003.11:g.186173680CA[13], NC_000003.11:g.186173680CA[14], NC_000003.11:g.186173680CA[15], NC_000003.11:g.186173680CA[16], NC_000003.11:g.186173680CA[17], NC_000003.11:g.186173680CA[19], NC_000003.11:g.186173680CA[20], NC_000003.11:g.186173680CA[21], NC_000003.11:g.186173680CA[22], NC_000003.11:g.186173680CA[23], NC_000003.11:g.186173680CA[24]
2.
rs1491497333 has merged into rs745483183 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AA>-,A,AAA,AAAAA
[Show Flanks]
- Chromosome:
- 3:186486500
(GRCh38)
3:186204289
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186486498:AAA:A,NC_000003.12:186486498:AAA:AA,NC_000003.12:186486498:AAA:AAAA,NC_000003.12:186486498:AAA:AAAAAA
- Gene:
- LINC02052 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
AAA=0.00285/11
(ALSPAC)
AAA=0.00351/13
(TWINSUK)
A=0.01143/191
(TOMMO)
- HGVS:
3.
rs1491490208 has merged into rs57714874 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->G,GAAGG
[Show Flanks]
- Chromosome:
- 3:186486493
(GRCh38)
3:186204283
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186486493:G:GG,NC_000003.12:186486493:G:GGAAGG
- Gene:
- LINC02052 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GG=0./0
(
ALFA)
G=0.00055/1
(Korea1K)
G=0.00229/38
(TOMMO)
G=0.03695/137
(TWINSUK)
G=0.03762/145
(ALSPAC)
- HGVS:
4.
rs1491480354 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GA>-,GAGAGAGAGAGAGAGA
[Show Flanks]
- Chromosome:
- 3:186486442
(GRCh38)
3:186204231
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186486440:AGA:A,NC_000003.12:186486440:AGA:AGAGAGAGAGAGAGAGA
- Gene:
- LINC02052 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.0016/19
(
ALFA)
AGAGAGAGAGAGAG=0.00019/3
(TOMMO)
-=0.00208/40
(GnomAD)
- HGVS:
5.
rs1491449828 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GAAG
[Show Flanks]
- Chromosome:
- 3:186486499
(GRCh38)
3:186204289
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186486499:AAG:AAGGAAG
- Gene:
- LINC02052 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
AAGGAAG=0./0
(
ALFA)
AAGG=0.00002/2
(GnomAD)
- HGVS:
6.
rs1491441071 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- GG>-
[Show Flanks]
- Chromosome:
- 3:186486506
(GRCh38)
3:186204295
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186486505:GG:
- Gene:
- LINC02052 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency
- MAF:
-=0.000023/3
(GnomAD)
- HGVS:
8.
rs1491402226 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AGAA>-,AGAAAGAA
[Show Flanks]
- Chromosome:
- 3:186486510
(GRCh38)
3:186204299
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186486506:GAAAGAA:GAA,NC_000003.12:186486506:GAAAGAA:GAAAGAAAGAA
- Gene:
- LINC02052 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GAAAGAAAGAA=0.00034/4
(
ALFA)
- HGVS:
10.
rs1491341095 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->G,GAAGG
[Show Flanks]
- Chromosome:
- 3:186486489
(GRCh38)
3:186204279
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186486489:G:GG,NC_000003.12:186486489:G:GGAAGG
- Gene:
- LINC02052 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GG=0./0
(
ALFA)
G=0.00377/63
(TOMMO)
G=0.00437/8
(Korea1K)
- HGVS:
12.
rs1491245793 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 3:186494649
(GRCh38)
3:186212438
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186494648:CA:
- Gene:
- LINC02052 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.00497/59
(
ALFA)
-=0.00181/62
(GnomAD)
- HGVS:
14.
rs1491154441 has merged into rs58063594 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAA>-,A,AA,AAA,AAAAA,AAAAAA
[Show Flanks]
- Chromosome:
- 3:186475396
(GRCh38)
3:186193185
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186475382:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000003.12:186475382:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000003.12:186475382:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000003.12:186475382:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000003.12:186475382:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000003.12:186475382:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA
- Gene:
- LINC02052 (Varview), LINC02051 (Varview)
- Functional Consequence:
- intron_variant,2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAA=0./0
(
ALFA)
A=0.3361/1683
(1000Genomes)
- HGVS:
NC_000003.12:g.186475396_186475399del, NC_000003.12:g.186475397_186475399del, NC_000003.12:g.186475398_186475399del, NC_000003.12:g.186475399del, NC_000003.12:g.186475399dup, NC_000003.12:g.186475398_186475399dup, NC_000003.11:g.186193185_186193188del, NC_000003.11:g.186193186_186193188del, NC_000003.11:g.186193187_186193188del, NC_000003.11:g.186193188del, NC_000003.11:g.186193188dup, NC_000003.11:g.186193187_186193188dup
15.
rs1491147896 has merged into rs143542205 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GT>-,GTGT
[Show Flanks]
- Chromosome:
- 3:186485882
(GRCh38)
3:186203671
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186485880:TGT:T,NC_000003.12:186485880:TGT:TGTGT
- Gene:
- LINC02052 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TGTGT=0./0
(
ALFA)
-=0.1557/1545
(TOMMO)
-=0.425/17
(GENOME_DK)
-=0.439/223
(NorthernSweden)
-=0.4819/3086
(1000Genomes)
- HGVS:
16.
rs1491147687 has merged into rs4012487 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAA>-,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 3:186494659
(GRCh38)
3:186212448
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186494649:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- LINC02052 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAA=0./0
(
ALFA)
AA=0.0956/479
(1000Genomes)
- HGVS:
NC_000003.12:g.186494659_186494667del, NC_000003.12:g.186494662_186494667del, NC_000003.12:g.186494663_186494667del, NC_000003.12:g.186494664_186494667del, NC_000003.12:g.186494665_186494667del, NC_000003.12:g.186494666_186494667del, NC_000003.12:g.186494667del, NC_000003.12:g.186494667dup, NC_000003.12:g.186494666_186494667dup, NC_000003.12:g.186494664_186494667dup, NC_000003.12:g.186494663_186494667dup, NC_000003.12:g.186494662_186494667dup, NC_000003.12:g.186494660_186494667dup, NC_000003.12:g.186494659_186494667dup, NC_000003.12:g.186494658_186494667dup, NC_000003.12:g.186494657_186494667dup, NC_000003.12:g.186494656_186494667dup, NC_000003.11:g.186212448_186212456del, NC_000003.11:g.186212451_186212456del, NC_000003.11:g.186212452_186212456del, NC_000003.11:g.186212453_186212456del, NC_000003.11:g.186212454_186212456del, NC_000003.11:g.186212455_186212456del, NC_000003.11:g.186212456del, NC_000003.11:g.186212456dup, NC_000003.11:g.186212455_186212456dup, NC_000003.11:g.186212453_186212456dup, NC_000003.11:g.186212452_186212456dup, NC_000003.11:g.186212451_186212456dup, NC_000003.11:g.186212449_186212456dup, NC_000003.11:g.186212448_186212456dup, NC_000003.11:g.186212447_186212456dup, NC_000003.11:g.186212446_186212456dup, NC_000003.11:g.186212445_186212456dup
18.
rs1491114613 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 3:186486485
(GRCh38)
3:186204275
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186486485:G:GG
- Gene:
- LINC02052 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GG=0./0
(
ALFA)
G=0.000041/1
(TOMMO)
G=0.000546/1
(Korea1K)
G=0.011667/7
(NorthernSweden)
G=0.013476/1659
(GnomAD)
- HGVS:
19.
rs1491072393 has merged into rs56096041 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAA>-,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 3:186480530
(GRCh38)
3:186198319
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186480522:AAAAAAAAAAAAAAAAAAA:AAAAAAA,NC_000003.12:186480522:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000003.12:186480522:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000003.12:186480522:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000003.12:186480522:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000003.12:186480522:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000003.12:186480522:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000003.12:186480522:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000003.12:186480522:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186480522:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186480522:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186480522:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- LINC02052 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAA=0./0
(
ALFA)
-=0.3281/1643
(1000Genomes)
- HGVS:
NC_000003.12:g.186480530_186480541del, NC_000003.12:g.186480536_186480541del, NC_000003.12:g.186480537_186480541del, NC_000003.12:g.186480538_186480541del, NC_000003.12:g.186480539_186480541del, NC_000003.12:g.186480540_186480541del, NC_000003.12:g.186480541del, NC_000003.12:g.186480541dup, NC_000003.12:g.186480540_186480541dup, NC_000003.12:g.186480539_186480541dup, NC_000003.12:g.186480538_186480541dup, NC_000003.12:g.186480537_186480541dup, NC_000003.11:g.186198319_186198330del, NC_000003.11:g.186198325_186198330del, NC_000003.11:g.186198326_186198330del, NC_000003.11:g.186198327_186198330del, NC_000003.11:g.186198328_186198330del, NC_000003.11:g.186198329_186198330del, NC_000003.11:g.186198330del, NC_000003.11:g.186198330dup, NC_000003.11:g.186198329_186198330dup, NC_000003.11:g.186198328_186198330dup, NC_000003.11:g.186198327_186198330dup, NC_000003.11:g.186198326_186198330dup