SNP Links for Gene (Select 26767) - SNP

Links from Gene

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Select item 14898144921.

rs1489814492 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:8831402 (GRCh38)
20:8812049 (GRCh37)
Canonical SPDI:: NC_000020.11:8831401:C:T
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.8831402C>T, NC_000020.10:g.8812049C>T, NG_028168.1:g.703754C>T

Select item 14877775312.

rs1487777531 [Homo sapiens]

Variant type:: DELINS
Alleles:: TG>- [Show Flanks]
Chromosome:: 20:8829350 (GRCh38)
20:8809997 (GRCh37)
Canonical SPDI:: NC_000020.11:8829344:GTGTGTG:GTGTG
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GTGTG=0./0 (ALFA)
-=0.000026/7 (TOPMED)
-=0.000029/4 (GnomAD)
-=0.000156/1 (1000Genomes)
HGVS:: NC_000020.11:g.8829346TG[2], NC_000020.10:g.8809993TG[2], NG_028168.1:g.701698TG[2]

Select item 14858057143.

rs1485805714 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 20:8830452 (GRCh38)
20:8811099 (GRCh37)
Canonical SPDI:: NC_000020.11:8830451:C:A
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.8830452C>A, NC_000020.10:g.8811099C>A, NG_028168.1:g.702804C>A

Select item 14836243164.

rs1483624316 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:8831873 (GRCh38)
20:8812520 (GRCh37)
Canonical SPDI:: NC_000020.11:8831872:T:C
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.8831873T>C, NC_000020.10:g.8812520T>C, NG_028168.1:g.704225T>C

Select item 14834672455.

rs1483467245 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 20:8830760 (GRCh38)
20:8811407 (GRCh37)
Canonical SPDI:: NC_000020.11:8830759:C:G
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000020.11:g.8830760C>G, NC_000020.10:g.8811407C>G, NG_028168.1:g.703112C>G

Select item 14794106916.

rs1479410691 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: 20:8829828 (GRCh38)
20:8810475 (GRCh37)
Canonical SPDI:: NC_000020.11:8829827:AAA:AA
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000020.11:g.8829830del, NC_000020.10:g.8810477del, NG_028168.1:g.702182del

Select item 14752900117.

rs1475290011 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:8830148 (GRCh38)
20:8810795 (GRCh37)
Canonical SPDI:: NC_000020.11:8830147:A:G
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000026/7 (TOPMED)
HGVS:: NC_000020.11:g.8830148A>G, NC_000020.10:g.8810795A>G, NG_028168.1:g.702500A>G

Select item 14749994048.

rs1474999404 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 20:8831617 (GRCh38)
20:8812264 (GRCh37)
Canonical SPDI:: NC_000020.11:8831616:A:C
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.8831617A>C, NC_000020.10:g.8812264A>C, NG_028168.1:g.703969A>C

Select item 14748448289.

rs1474844828 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 20:8830525 (GRCh38)
20:8811172 (GRCh37)
Canonical SPDI:: NC_000020.11:8830524:GG:G
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
-=0.000011/3 (TOPMED)
HGVS:: NC_000020.11:g.8830526del, NC_000020.10:g.8811173del, NG_028168.1:g.702878del

Select item 147473184110.

rs1474731841 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:8831441 (GRCh38)
20:8812088 (GRCh37)
Canonical SPDI:: NC_000020.11:8831440:A:G
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.8831441A>G, NC_000020.10:g.8812088A>G, NG_028168.1:g.703793A>G

Select item 147338438111.

rs1473384381 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 20:8831380 (GRCh38)
20:8812027 (GRCh37)
Canonical SPDI:: NC_000020.11:8831379:T:G
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.8831380T>G, NC_000020.10:g.8812027T>G, NG_028168.1:g.703732T>G, NR_004386.2:n.196T>G

Select item 147305428012.

rs1473054280 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 20:8830851 (GRCh38)
20:8811498 (GRCh37)
Canonical SPDI:: NC_000020.11:8830850:T:C,NC_000020.11:8830850:T:G
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000020.11:g.8830851T>C, NC_000020.11:g.8830851T>G, NC_000020.10:g.8811498T>C, NC_000020.10:g.8811498T>G, NG_028168.1:g.703203T>C, NG_028168.1:g.703203T>G

Select item 147145877013.

rs1471458770 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 20:8829224 (GRCh38)
20:8809871 (GRCh37)
Canonical SPDI:: NC_000020.11:8829223:C:G
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.8829224C>G, NC_000020.10:g.8809871C>G, NG_028168.1:g.701576C>G

Select item 147140796814.

rs1471407968 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:8830320 (GRCh38)
20:8810967 (GRCh37)
Canonical SPDI:: NC_000020.11:8830319:A:G
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.8830320A>G, NC_000020.10:g.8810967A>G, NG_028168.1:g.702672A>G

Select item 147101888915.

rs1471018889 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 20:8829885 (GRCh38)
20:8810532 (GRCh37)
Canonical SPDI:: NC_000020.11:8829884:T:G
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000020.11:g.8829885T>G, NC_000020.10:g.8810532T>G, NG_028168.1:g.702237T>G

Select item 146792495716.

rs1467924957 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:8831612 (GRCh38)
20:8812259 (GRCh37)
Canonical SPDI:: NC_000020.11:8831611:A:G
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: intron_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.8831612A>G, NC_000020.10:g.8812259A>G, NG_028168.1:g.703964A>G

Select item 146781087317.

rs1467810873 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:8830507 (GRCh38)
20:8811154 (GRCh37)
Canonical SPDI:: NC_000020.11:8830506:C:T
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.000035/1 (TOMMO)
HGVS:: NC_000020.11:g.8830507C>T, NC_000020.10:g.8811154C>T, NG_028168.1:g.702859C>T

Select item 146710229818.

rs1467102298 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 20:8830776 (GRCh38)
20:8811423 (GRCh37)
Canonical SPDI:: NC_000020.11:8830775:T:G
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000020.11:g.8830776T>G, NC_000020.10:g.8811423T>G, NG_028168.1:g.703128T>G

Select item 146556295419.

rs1465562954 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 20:8829494 (GRCh38)
20:8810141 (GRCh37)
Canonical SPDI:: NC_000020.11:8829493:T:A
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.8829494T>A, NC_000020.10:g.8810141T>A, NG_028168.1:g.701846T>A

Select item 146254283520.

rs1462542835 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:8830622 (GRCh38)
20:8811269 (GRCh37)
Canonical SPDI:: NC_000020.11:8830621:T:C
Gene:: PLCB1 (Varview), RNU105B (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.8830622T>C, NC_000020.10:g.8811269T>C, NG_028168.1:g.702974T>C

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