Links from Gene
Items: 1 to 20 of 951
1.
rs1491278995 has merged into rs1382397054 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AG>-,AGAG
[Show Flanks]
- Chromosome:
- 17:19062104
(GRCh38)
17:18965417
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19062100:GAGAG:GAG,NC_000017.11:19062100:GAGAG:GAGAGAG
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
GAGAGAG=0.000084/1
(
ALFA)
-=0.000027/4
(GnomAD_exomes)
-=0.00005/3
(ExAC)
- HGVS:
2.
rs1490374549 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 17:19062219
(GRCh38)
17:18965532
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19062218:A:G
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.001433/17
(
ALFA)
G=0.00015/2
(TOMMO)
G=0.001405/9
(1000Genomes)
G=0.00169/194
(GnomAD)
A=0.5/1
(SGDP_PRJ)
- HGVS:
4.
rs1490013572 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C,G
[Show Flanks]
- Chromosome:
- 17:19062255
(GRCh38)
17:18965568
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19062254:T:C,NC_000017.11:19062254:T:G
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
G=0.000029/3
(GnomAD)
- HGVS:
6.
rs1485365347 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 17:19062215
(GRCh38)
17:18965528
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19062214:C:G,NC_000017.11:19062214:C:T
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.00015/2
(TOMMO)
T=0.00016/1
(1000Genomes)
T=0.00059/1
(Korea1K)
T=0.00145/4
(KOREAN)
T=0.00833/5
(NorthernSweden)
- HGVS:
7.
rs1484940296 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C,G
[Show Flanks]
- Chromosome:
- 17:19062390
(GRCh38)
17:18965703
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19062389:A:C,NC_000017.11:19062389:A:G
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000018/2
(GnomAD)
- HGVS:
8.
rs1484591249 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 17:19060778
(GRCh38)
17:18964091
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19060777:C:T
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0.00084/10
(
ALFA)
T=0.22581/28
(KOREAN)
- HGVS:
9.
rs1483894534 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- C>-
[Show Flanks]
- Chromosome:
- 17:19061423
(GRCh38)
17:18964736
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19061422:C:
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency
- MAF:
-=0.00004/1
(TOMMO)
- HGVS:
10.
rs1482971157 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,C,T
[Show Flanks]
- Chromosome:
- 17:19061944
(GRCh38)
17:18965257
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19061943:G:A,NC_000017.11:19061943:G:C,NC_000017.11:19061943:G:T
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
A=0.00004/1
(TOMMO)
A=0.00005/4
(GnomAD)
- HGVS:
11.
rs1482778610 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C,G,T
[Show Flanks]
- Chromosome:
- 17:19062287
(GRCh38)
17:18965600
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19062286:A:C,NC_000017.11:19062286:A:G,NC_000017.11:19062286:A:T
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
G=0.00082/13
(TOMMO)
G=0.00282/5
(Korea1K)
- HGVS:
12.
rs1482144261 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->C,T
[Show Flanks]
- Chromosome:
- 17:19061984
(GRCh38)
17:18965298
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19061984::C,NC_000017.11:19061984::T
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
T=0.000013/1
(GnomAD)
- HGVS:
13.
rs1482094122 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GG>-,GGG
[Show Flanks]
- Chromosome:
- 17:19062602
(GRCh38)
17:18965915
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19062599:GGGG:GG,NC_000017.11:19062599:GGGG:GGGGG
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa
- MAF:
GGGGG=0./0
(
ALFA)
-=0.00001/1
(GnomAD)
- HGVS:
14.
rs1481750441 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 17:19061411
(GRCh38)
17:18964724
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19061410:A:G
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by cluster
- MAF:
G=0.00007/2
(TOMMO)
G=0.02129/58
(KOREAN)
- HGVS:
16.
rs1480507997 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,T
[Show Flanks]
- Chromosome:
- 17:19062295
(GRCh38)
17:18965608
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19062294:C:A,NC_000017.11:19062294:C:T
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000068/7
(GnomAD)
T=0.001093/7
(1000Genomes)
C=0.5/1
(SGDP_PRJ)
- HGVS:
17.
rs1479980149 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 17:19062393
(GRCh38)
17:18965706
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19062392:C:G,NC_000017.11:19062392:C:T
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.00031/2
(1000Genomes)
- HGVS:
18.
rs1479692523 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GGCTTTTT>-
[Show Flanks]
- Chromosome:
- 17:19062273
(GRCh38)
17:18965586
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19062271:TGGCTTTTT:T
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.000422/5
(
ALFA)
-=0.000762/80
(GnomAD)
- HGVS:
19.
rs1478486917 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C,T
[Show Flanks]
- Chromosome:
- 17:19061858
(GRCh38)
17:18965171
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19061857:A:C,NC_000017.11:19061857:A:T
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
C=0.00003/1
(GnomAD)
- HGVS:
20.
rs1477698774 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 17:19061763
(GRCh38)
17:18965076
(GRCh37)
- Canonical SPDI:
- NC_000017.11:19061762:T:C
- Gene:
- SNORD3B-1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0.00008/1
(
ALFA)
C=0.00173/3
(Korea1K)
- HGVS: