Links from Gene
Items: 1 to 20 of 2666
1.
rs1491502868 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AC>-
[Show Flanks]
- Chromosome:
- 15:58069279
(GRCh38)
15:58361477
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58069278:AC:
- Gene:
- ALDH1A2-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.00007/1
(TOMMO)
-=0.00055/1
(Korea1K)
...more- HGVS:
2.
rs1491453299 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->C
[Show Flanks]
- Chromosome:
- 15:58069279
(GRCh38)
15:58361478
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58069279:CC:CCC
- Gene:
- ALDH1A2-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
CCC=0./0
(
ALFA)
C=0.000007/1
(GnomAD)
- HGVS:
3.
rs1490622183 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>T
[Show Flanks]
- Chromosome:
- 15:58072360
(GRCh38)
15:58364558
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58072359:A:T
- Gene:
- ALDH1A2-AS1 (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
- HGVS:
4.
rs1490494989 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 15:58068976
(GRCh38)
15:58361174
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58068975:A:G
- Gene:
- ALDH1A2-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000014/2
(GnomAD)
...more- HGVS:
5.
rs1490031149 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 15:58068482
(GRCh38)
15:58360680
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58068481:C:G
- Gene:
- ALDH1A2-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
...more- HGVS:
6.
rs1490006756 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 15:58069392
(GRCh38)
15:58361590
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58069391:C:T
- Gene:
- ALDH1A2-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
T=0.000007/1
(GnomAD)
...more- HGVS:
7.
rs1489827432 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C,T
[Show Flanks]
- Chromosome:
- 15:58063249
(GRCh38)
15:58355447
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58063248:G:C,NC_000015.10:58063248:G:T
- Gene:
- ALDH1A2 (Varview), ALDH1A2-AS1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000014/2
(GnomAD)
- HGVS:
8.
rs1489785350 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,C
[Show Flanks]
- Chromosome:
- 15:58064002
(GRCh38)
15:58356200
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58064001:G:A,NC_000015.10:58064001:G:C
- Gene:
- ALDH1A2 (Varview), ALDH1A2-AS1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
A=0.00006/1
(TOMMO)
...more- HGVS:
9.
rs1489758207 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 15:58068580
(GRCh38)
15:58360778
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58068579:C:T
- Gene:
- ALDH1A2-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
T=0.000007/1
(GnomAD)
...more- HGVS:
10.
rs1489747575 has merged into rs1240790045 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- C>-,CC
[Show Flanks]
- Chromosome:
- 15:58069505
(GRCh38)
15:58361703
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58069504:CCCCCC:CCCCC,NC_000015.10:58069504:CCCCCC:CCCCCCC
- Gene:
- ALDH1A2-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CCCCCCC=0./0
(
ALFA)
-=0.000007/1
(GnomAD)
- HGVS:
11.
rs1489047660 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 15:58065620
(GRCh38)
15:58357818
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58065619:C:T
- Gene:
- ALDH1A2 (Varview), ALDH1A2-AS1 (Varview)
- Functional Consequence:
- 5_prime_UTR_variant,missense_variant,coding_sequence_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
- HGVS:
NC_000015.10:g.58065620C>T, NC_000015.9:g.58357818C>T, NG_012259.1:g.5089G>A, NM_003888.4:c.31G>A, NM_003888.3:c.31G>A, NM_170696.3:c.31G>A, NM_170696.2:c.31G>A, NM_001206897.2:c.-130G>A, NM_001206897.1:c.-130G>A, NR_147215.1:n.396C>T, NP_003879.2:p.Glu11Lys, NP_733797.1:p.Glu11Lys ...more
12.
rs1488951271 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 15:58066968
(GRCh38)
15:58359166
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58066967:C:A
- Gene:
- ALDH1A2 (Varview), ALDH1A2-AS1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000014/2
(GnomAD)
...more- HGVS:
13.
rs1488251704 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 15:58064430
(GRCh38)
15:58356628
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58064429:C:A
- Gene:
- ALDH1A2 (Varview), ALDH1A2-AS1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0./0
(KOREAN)
A=0.000011/3
(TOPMED)
A=0.000177/3
(TOMMO)
...more- HGVS:
14.
rs1488214827 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 15:58069104
(GRCh38)
15:58361302
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58069103:C:G
- Gene:
- ALDH1A2-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000014/2
(GnomAD)
G=0.000015/4
(TOPMED)
...more- HGVS:
15.
rs1487788534 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 15:58070525
(GRCh38)
15:58362723
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58070524:C:T
- Gene:
- ALDH1A2-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000008/2
(TOPMED)
- HGVS:
16.
rs1487135889 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 15:58066955
(GRCh38)
15:58359153
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58066954:C:T
- Gene:
- ALDH1A2 (Varview), ALDH1A2-AS1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.000071/1
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000011/3
(TOPMED)
...more- HGVS:
17.
rs1486996068 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 15:58067832
(GRCh38)
15:58360030
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58067831:C:T
- Gene:
- ALDH1A2-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
20.
rs1486519005 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 15:58067899
(GRCh38)
15:58360097
(GRCh37)
- Canonical SPDI:
- NC_000015.10:58067898:G:C
- Gene:
- ALDH1A2-AS1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS: