SNP Links for Gene (Select 283694) - SNP

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Select item 14915455141.

rs1491545514 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>- [Show Flanks]
Chromosome:: 15:22096077 (GRCh38)
15:22384028 (GRCh37)
Canonical SPDI:: NC_000015.10:22096075:AAA:A
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by cluster
MAF:: -=0.00072/12 (TOMMO)
HGVS:: NC_000015.10:g.22096077_22096078del, NC_000015.9:g.22384028_22384029del

Select item 14912592842.

rs1491259284 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 15:22092844 (GRCh38)
15:22380795 (GRCh37)
Canonical SPDI:: NC_000015.10:22092843:CA:
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000015.10:g.22092844_22092845del, NC_000015.9:g.22380795_22380796del

Select item 14911223903.

rs1491122390 [Homo sapiens]

Variant type:: INS
Alleles:: ->TTTTT [Show Flanks]
Chromosome:: 15:22096076 (GRCh38)
15:22384028 (GRCh37)
Canonical SPDI:: NC_000015.10:22096076::TTTTT
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by cluster
MAF:: TTTTT=0.00645/108 (TOMMO)
HGVS:: NC_000015.10:g.22096076_22096077insTTTTT, NC_000015.9:g.22384027_22384028insTTTTT

Select item 14880849404.

rs1488084940 [Homo sapiens]

Variant type:: SNV:
Alleles:: G>A
Chromosome:: no mapping
Canonical SPDI:

Select item 14876583525.

rs1487658352 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:22094130 (GRCh38)
15:22382081 (GRCh37)
Canonical SPDI:: NC_000015.10:22094129:C:T
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: T=0.0014/4 (KOREAN)
HGVS:: NC_000015.10:g.22094130C>T, NC_000015.9:g.22382081C>T, NG_081665.1:g.81C>T, NW_021160017.1:g.1322754C>T

Select item 14852949726.

rs1485294972 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 15:22092720 (GRCh38)
15:22380671 (GRCh37)
Canonical SPDI:: NC_000015.10:22092719:A:C
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000015.10:g.22092720A>C, NC_000015.9:g.22380671A>C

Select item 14848777377.

rs1484877737 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:22092673 (GRCh38)
15:22380624 (GRCh37)
Canonical SPDI:: NC_000015.10:22092672:C:T
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000015.10:g.22092673C>T, NC_000015.9:g.22380624C>T

Select item 14846140698.

rs1484614069 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:22095081 (GRCh38)
15:22383032 (GRCh37)
Canonical SPDI:: NC_000015.10:22095080:T:C
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
HGVS:: NC_000015.10:g.22095081T>C, NC_000015.9:g.22383032T>C, NG_081665.1:g.1032T>C, NW_021160017.1:g.1323705T>C, NM_001005241.4:c.560T>C, NM_001005241.3:c.560T>C, NM_001005241.2:c.560T>C, NM_001395471.1:c.560T>C, NP_001005241.2:p.Leu187Pro

Select item 14845660909.

rs1484566090 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 15:22092843 (GRCh38)
15:22380794 (GRCh37)
Canonical SPDI:: NC_000015.10:22092842:CC:C
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: CC=0.00717/85 (ALFA)
HGVS:: NC_000015.10:g.22092844del, NC_000015.9:g.22380795del

Select item 148395637810.

rs1483956378 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 15:22095700 (GRCh38)
15:22383651 (GRCh37)
Canonical SPDI:: NC_000015.10:22095699:C:A
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.00003/2 (GnomAD)
HGVS:: NC_000015.10:g.22095700C>A, NC_000015.9:g.22383651C>A, NM_001005241.4:c.*228C>A, NM_001005241.3:c.*228C>A, NM_001005241.2:c.*228C>A

Select item 148332398911.

rs1483323989 [Homo sapiens]

Variant type:: SNV:
Alleles:: A>G
Chromosome:: no mapping
Canonical SPDI:

Select item 148331037812.

rs1483310378 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:22095830 (GRCh38)
15:22383781 (GRCh37)
Canonical SPDI:: NC_000015.10:22095829:G:A
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.00003/1 (GnomAD)
HGVS:: NC_000015.10:g.22095830G>A, NC_000015.9:g.22383781G>A, NM_001005241.4:c.*358G>A, NM_001005241.3:c.*358G>A, NM_001005241.2:c.*358G>A

Select item 148196767513.

rs1481967675 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:22095676 (GRCh38)
15:22383627 (GRCh37)
Canonical SPDI:: NC_000015.10:22095675:T:C
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.00003/2 (GnomAD)
HGVS:: NC_000015.10:g.22095676T>C, NC_000015.9:g.22383627T>C, NM_001005241.4:c.*204T>C, NM_001005241.3:c.*204T>C, NM_001005241.2:c.*204T>C

Select item 147974715014.

rs1479747150 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 15:22093045 (GRCh38)
15:22380996 (GRCh37)
Canonical SPDI:: NC_000015.10:22093044:T:G
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0.00008/1 (ALFA)
HGVS:: NC_000015.10:g.22093045T>G, NC_000015.9:g.22380996T>G

Select item 147957993615.

rs1479579936 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:22092438 (GRCh38)
15:22380389 (GRCh37)
Canonical SPDI:: NC_000015.10:22092437:A:G
Gene:: OR4M2-OT1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.0018/8 (ALFA)
HGVS:: NC_000015.10:g.22092438A>G, NC_000015.9:g.22380389A>G

Select item 147957126116.

rs1479571261 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 15:22093735 (GRCh38)
15:22381686 (GRCh37)
Canonical SPDI:: NC_000015.10:22093734:A:C
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by cluster
MAF:: C=0.00054/9 (TOMMO)
C=0.00137/4 (KOREAN)
HGVS:: NC_000015.10:g.22093735A>C, NC_000015.9:g.22381686A>C

Select item 147916794217.

rs1479167942 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:22094730 (GRCh38)
15:22382681 (GRCh37)
Canonical SPDI:: NC_000015.10:22094729:A:G
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
HGVS:: NC_000015.10:g.22094730A>G, NC_000015.9:g.22382681A>G, NG_081665.1:g.681A>G, NW_021160017.1:g.1323354A>G, NM_001005241.4:c.209A>G, NM_001005241.3:c.209A>G, NM_001005241.2:c.209A>G, NR_110481.1:n.773A>G, NR_110480.1:n.1041A>G, NM_001395471.1:c.209A>G, NP_001005241.2:p.Asp70Gly

Select item 147905609518.

rs1479056095 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:22092745 (GRCh38)
15:22380696 (GRCh37)
Canonical SPDI:: NC_000015.10:22092744:C:T
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.00002/1 (GnomAD)
HGVS:: NC_000015.10:g.22092745C>T, NC_000015.9:g.22380696C>T

Select item 147904781419.

rs1479047814 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 15:22094144 (GRCh38)
15:22382095 (GRCh37)
Canonical SPDI:: NC_000015.10:22094143:G:C
Gene:: OR4N4 (Varview), OR4M2-OT1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: G=0.5/1 (SGDP_PRJ)
HGVS:: NC_000015.10:g.22094144G>C, NC_000015.9:g.22382095G>C, NG_081665.1:g.95G>C, NW_021160017.1:g.1322768G>C

Select item 147854162220.

rs1478541622 [Homo sapiens]

Variant type:: SNV:
Alleles:: C>A
Chromosome:: no mapping
Canonical SPDI:

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