Links from Gene
Items: 1 to 20 of 10819
1.
rs1491512248 has merged into rs150399683 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CACACACACACA>-,CACA,CACACA,CACACACA,CACACACACA,CACACACACACACA,CACACACACACACACA,CACACACACACACACACA,CACACACACACACACACACA,CACACACACACACATACACACACACACACACACACA
[Show Flanks]
- Chromosome:
- 18:75414130
(GRCh38)
18:73126085
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75414122:ACACACACACACACACACA:ACACACA,NC_000018.10:75414122:ACACACACACACACACACA:ACACACACACA,NC_000018.10:75414122:ACACACACACACACACACA:ACACACACACACA,NC_000018.10:75414122:ACACACACACACACACACA:ACACACACACACACA,NC_000018.10:75414122:ACACACACACACACACACA:ACACACACACACACACA,NC_000018.10:75414122:ACACACACACACACACACA:ACACACACACACACACACACA,NC_000018.10:75414122:ACACACACACACACACACA:ACACACACACACACACACACACA,NC_000018.10:75414122:ACACACACACACACACACA:ACACACACACACACACACACACACA,NC_000018.10:75414122:ACACACACACACACACACA:ACACACACACACACACACACACACACA,NC_000018.10:75414122:ACACACACACACACACACA:ACACACACACACACACACACATACACACACACACACACACACA
- Gene:
- SMIM21 (Varview), LOC105372200 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACACACACACACACA=0./0
(
ALFA)
-=0.25/2
(KOREAN)
- HGVS:
NC_000018.10:g.75414124CA[3], NC_000018.10:g.75414124CA[5], NC_000018.10:g.75414124CA[6], NC_000018.10:g.75414124CA[7], NC_000018.10:g.75414124CA[8], NC_000018.10:g.75414124CA[10], NC_000018.10:g.75414124CA[11], NC_000018.10:g.75414124CA[12], NC_000018.10:g.75414124CA[13], NC_000018.10:g.75414123_75414141AC[10]ATACACACACACACACACACACA[1], NC_000018.9:g.73126079CA[3], NC_000018.9:g.73126079CA[5], NC_000018.9:g.73126079CA[6], NC_000018.9:g.73126079CA[7], NC_000018.9:g.73126079CA[8], NC_000018.9:g.73126079CA[10], NC_000018.9:g.73126079CA[11], NC_000018.9:g.73126079CA[12], NC_000018.9:g.73126079CA[13], NC_000018.9:g.73126078_73126096AC[10]ATACACACACACACACACACACA[1]
3.
rs1491438007 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->T
[Show Flanks]
- Chromosome:
- 18:75450224
(GRCh38)
18:73162180
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75450224::T
- Gene:
- LOC124900405 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000022/3
(GnomAD)
T=0.000023/6
(TOPMED)
T=0.000531/9
(TOMMO)
- HGVS:
4.
rs1491412522 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CTGT,CTGTGT,CTGTGTGT,CTGTGTGTGT,CTGTGTGTGTGT,CTGTGTGTGTGTGT,CTGTGTGTGTGTGTGTGT
[Show Flanks]
- Chromosome:
- 18:75441062
(GRCh38)
18:73153018
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75441062:T:TCTGT,NC_000018.10:75441062:T:TCTGTGT,NC_000018.10:75441062:T:TCTGTGTGT,NC_000018.10:75441062:T:TCTGTGTGTGT,NC_000018.10:75441062:T:TCTGTGTGTGTGT,NC_000018.10:75441062:T:TCTGTGTGTGTGTGT,NC_000018.10:75441062:T:TCTGTGTGTGTGTGTGTGT
- Gene:
- LOC124900405 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000018.10:g.75441063_75441064insCTGT, NC_000018.10:g.75441063_75441064insCTGTGT, NC_000018.10:g.75441063_75441064insCTGTGTGT, NC_000018.10:g.75441063_75441064insCTGTGTGTGT, NC_000018.10:g.75441063_75441064insCTGTGTGTGTGT, NC_000018.10:g.75441063_75441064insCTGTGTGTGTGTGT, NC_000018.10:g.75441063_75441064insCTGTGTGTGTGTGTGTGT, NC_000018.9:g.73153018_73153019insCTGT, NC_000018.9:g.73153018_73153019insCTGTGT, NC_000018.9:g.73153018_73153019insCTGTGTGT, NC_000018.9:g.73153018_73153019insCTGTGTGTGT, NC_000018.9:g.73153018_73153019insCTGTGTGTGTGT, NC_000018.9:g.73153018_73153019insCTGTGTGTGTGTGT, NC_000018.9:g.73153018_73153019insCTGTGTGTGTGTGTGTGT
5.
rs1491381523 has merged into rs10643353 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GTGTGT>-,GT,GTGT,GTGTGTGT,GTGTGTGTGT,GTGTGTGTGTGT,GTGTGTGTGTGTGT,GTGTGTGTGTGTGTGT
[Show Flanks]
- Chromosome:
- 18:75409675
(GRCh38)
18:73121630
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
- Gene:
- SMIM21 (Varview), LOC105372200 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TGTGTGTGTGTGTGTGT=0./0
(
ALFA)
TGTGTG=0.047788/12649
(TOPMED)
-=0.277756/1391
(1000Genomes)
- HGVS:
NC_000018.10:g.75409661GT[7], NC_000018.10:g.75409661GT[8], NC_000018.10:g.75409661GT[9], NC_000018.10:g.75409661GT[11], NC_000018.10:g.75409661GT[12], NC_000018.10:g.75409661GT[13], NC_000018.10:g.75409661GT[14], NC_000018.10:g.75409661GT[15], NC_000018.9:g.73121616GT[7], NC_000018.9:g.73121616GT[8], NC_000018.9:g.73121616GT[9], NC_000018.9:g.73121616GT[11], NC_000018.9:g.73121616GT[12], NC_000018.9:g.73121616GT[13], NC_000018.9:g.73121616GT[14], NC_000018.9:g.73121616GT[15], NM_001037331.3:c.*1185CA[7], NM_001037331.3:c.*1185CA[8], NM_001037331.3:c.*1185CA[9], NM_001037331.3:c.*1185CA[11], NM_001037331.3:c.*1185CA[12], NM_001037331.3:c.*1185CA[13], NM_001037331.3:c.*1185CA[14], NM_001037331.3:c.*1185CA[15]
6.
rs1491335235 has merged into rs1009582935 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GAGA>-,GA,GAGAGA,GAGAGAGA,GAGAGAGAGA
[Show Flanks]
- Chromosome:
- 18:75450237
(GRCh38)
18:73162192
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75450223:AGAGAGAGAGAGAGAGA:AGAGAGAGAGAGA,NC_000018.10:75450223:AGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGA,NC_000018.10:75450223:AGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGA,NC_000018.10:75450223:AGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGA,NC_000018.10:75450223:AGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGA
- Gene:
- LOC124900405 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AGAGAGAGAGAGAGA=0./0
(
ALFA)
-=0.000019/5
(TOPMED)
AG=0.000035/1
(TOMMO)
AG=0.000223/1
(Estonian)
-=0.001638/3
(Korea1K)
- HGVS:
8.
rs1491289199 has merged into rs10643353 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GTGTGT>-,GT,GTGT,GTGTGTGT,GTGTGTGTGT,GTGTGTGTGTGT,GTGTGTGTGTGTGT,GTGTGTGTGTGTGTGT
[Show Flanks]
- Chromosome:
- 18:75409675
(GRCh38)
18:73121630
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000018.10:75409659:TGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
- Gene:
- SMIM21 (Varview), LOC105372200 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TGTGTGTGTGTGTGTGT=0./0
(
ALFA)
TGTGTG=0.047788/12649
(TOPMED)
-=0.277756/1391
(1000Genomes)
- HGVS:
NC_000018.10:g.75409661GT[7], NC_000018.10:g.75409661GT[8], NC_000018.10:g.75409661GT[9], NC_000018.10:g.75409661GT[11], NC_000018.10:g.75409661GT[12], NC_000018.10:g.75409661GT[13], NC_000018.10:g.75409661GT[14], NC_000018.10:g.75409661GT[15], NC_000018.9:g.73121616GT[7], NC_000018.9:g.73121616GT[8], NC_000018.9:g.73121616GT[9], NC_000018.9:g.73121616GT[11], NC_000018.9:g.73121616GT[12], NC_000018.9:g.73121616GT[13], NC_000018.9:g.73121616GT[14], NC_000018.9:g.73121616GT[15], NM_001037331.3:c.*1185CA[7], NM_001037331.3:c.*1185CA[8], NM_001037331.3:c.*1185CA[9], NM_001037331.3:c.*1185CA[11], NM_001037331.3:c.*1185CA[12], NM_001037331.3:c.*1185CA[13], NM_001037331.3:c.*1185CA[14], NM_001037331.3:c.*1185CA[15]
11.
rs1491194900 has merged into rs74180809 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CACACACACA>-,CA,CACA,CACACA,CACACACA,CACACACACACA,CACACACACACACA,CACACACACACACACA,CACACACACACACACACACACA,CACACACACACACACACACACACA
[Show Flanks]
- Chromosome:
- 18:75414088
(GRCh38)
18:73126043
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75414075:CACACACACACACACACACACA:CACACACACACA,NC_000018.10:75414075:CACACACACACACACACACACA:CACACACACACACA,NC_000018.10:75414075:CACACACACACACACACACACA:CACACACACACACACA,NC_000018.10:75414075:CACACACACACACACACACACA:CACACACACACACACACA,NC_000018.10:75414075:CACACACACACACACACACACA:CACACACACACACACACACA,NC_000018.10:75414075:CACACACACACACACACACACA:CACACACACACACACACACACACA,NC_000018.10:75414075:CACACACACACACACACACACA:CACACACACACACACACACACACACA,NC_000018.10:75414075:CACACACACACACACACACACA:CACACACACACACACACACACACACACA,NC_000018.10:75414075:CACACACACACACACACACACA:CACACACACACACACACACACACACACACACACA,NC_000018.10:75414075:CACACACACACACACACACACA:CACACACACACACACACACACACACACACACACACA
- Gene:
- SMIM21 (Varview), LOC105372200 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CACACACACACACACA=0./0
(
ALFA)
-=0.1/4
(GENOME_DK)
-=0.21/126
(NorthernSweden)
-=0.29995/1156
(ALSPAC)
-=0.36601/1833
(1000Genomes)
- HGVS:
NC_000018.10:g.75414076CA[6], NC_000018.10:g.75414076CA[7], NC_000018.10:g.75414076CA[8], NC_000018.10:g.75414076CA[9], NC_000018.10:g.75414076CA[10], NC_000018.10:g.75414076CA[12], NC_000018.10:g.75414076CA[13], NC_000018.10:g.75414076CA[14], NC_000018.10:g.75414076CA[17], NC_000018.10:g.75414076CA[18], NC_000018.9:g.73126031CA[6], NC_000018.9:g.73126031CA[7], NC_000018.9:g.73126031CA[8], NC_000018.9:g.73126031CA[9], NC_000018.9:g.73126031CA[10], NC_000018.9:g.73126031CA[12], NC_000018.9:g.73126031CA[13], NC_000018.9:g.73126031CA[14], NC_000018.9:g.73126031CA[17], NC_000018.9:g.73126031CA[18]
12.
rs1491079415 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->TACACACA,TACACATACACACA
[Show Flanks]
- Chromosome:
- 18:75414082
(GRCh38)
18:73126038
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75414082:ACACACA:ACACACATACACACA,NC_000018.10:75414082:ACACACA:ACACACATACACATACACACA
- Gene:
- SMIM21 (Varview), LOC105372200 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACACACATACACACA=0.00008/1
(
ALFA)
- HGVS:
13.
rs1491034925 has merged into rs3214645 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TT>-,T,TTT,TTTT,TTTTT
[Show Flanks]
- Chromosome:
- 18:75418706
(GRCh38)
18:73130661
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75418698:TTTTTTTTT:TTTTTTT,NC_000018.10:75418698:TTTTTTTTT:TTTTTTTT,NC_000018.10:75418698:TTTTTTTTT:TTTTTTTTTT,NC_000018.10:75418698:TTTTTTTTT:TTTTTTTTTTT,NC_000018.10:75418698:TTTTTTTTT:TTTTTTTTTTTT
- Gene:
- SMIM21 (Varview), LOC105372200 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTT=0./0
(
ALFA)
TT=0.1967/985
(1000Genomes)
- HGVS:
14.
rs1490988059 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 18:75456235
(GRCh38)
18:73168190
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75456234:C:T
- Gene:
- LOC107985177 (Varview), LOC124900405 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.000224/1
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000223/1
(Estonian)
- HGVS:
15.
rs1490987883 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 18:75442927
(GRCh38)
18:73154882
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75442926:C:T
- Gene:
- LOC124900405 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000011/3
(TOPMED)
- HGVS:
16.
rs1490919097 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 18:75420438
(GRCh38)
18:73132393
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75420437:T:G
- Gene:
- SMIM21 (Varview), LOC105372200 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.000895/4
(
ALFA)
G=0.000021/3
(GnomAD)
G=0.000893/4
(Estonian)
- HGVS:
17.
rs1490841383 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G,T
[Show Flanks]
- Chromosome:
- 18:75454095
(GRCh38)
18:73166050
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75454094:A:G,NC_000018.10:75454094:A:T
- Gene:
- LOC107985177 (Varview), LOC124900405 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
- HGVS:
18.
rs1490836851 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 18:75421275
(GRCh38)
18:73133230
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75421274:A:G
- Gene:
- SMIM21 (Varview), LOC105372200 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
- HGVS:
19.
rs1490672740 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 18:75420813
(GRCh38)
18:73132768
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75420812:T:C
- Gene:
- SMIM21 (Varview), LOC105372200 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
20.
rs1490555486 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 18:75440595
(GRCh38)
18:73152550
(GRCh37)
- Canonical SPDI:
- NC_000018.10:75440594:G:C
- Gene:
- LOC124900405 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0.000071/1
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000021/3
(GnomAD)
- HGVS: