SNP Links for Gene (Select 284835) - SNP

Links from Gene

Items: 1 to 20 of 2008

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Select item 14909085181.

rs1490908518 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 21:41147322 (GRCh38)
21:42519249 (GRCh37)
Canonical SPDI:: NC_000021.9:41147321:G:T
Gene:: LINC00323 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000021.9:g.41147322G>T, NC_000021.8:g.42519249G>T

Select item 14905909292.

rs1490590929 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 21:41148725 (GRCh38)
21:42520652 (GRCh37)
Canonical SPDI:: NC_000021.9:41148724:C:T
Gene:: LINC00323 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000026/7 (TOPMED)
T=0.000036/5 (GnomAD)
HGVS:: NC_000021.9:g.41148725C>T, NC_000021.8:g.42520652C>T

Select item 14903847823.

rs1490384782 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 21:41141420 (GRCh38)
21:42513347 (GRCh37)
Canonical SPDI:: NC_000021.9:41141419:C:A,NC_000021.9:41141419:C:G
Gene:: LINC00323 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.41141420C>A, NC_000021.9:g.41141420C>G, NC_000021.8:g.42513347C>A, NC_000021.8:g.42513347C>G

Select item 14899244564.

rs1489924456 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 21:41149086 (GRCh38)
21:42521013 (GRCh37)
Canonical SPDI:: NC_000021.9:41149085:C:A,NC_000021.9:41149085:C:G,NC_000021.9:41149085:C:T
Gene:: LINC00323 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.41149086C>A, NC_000021.9:g.41149086C>G, NC_000021.9:g.41149086C>T, NC_000021.8:g.42521013C>A, NC_000021.8:g.42521013C>G, NC_000021.8:g.42521013C>T

Select item 14898141885.

rs1489814188 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 21:41143711 (GRCh38)
21:42515638 (GRCh37)
Canonical SPDI:: NC_000021.9:41143710:A:T
Gene:: LINC00323 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.41143711A>T, NC_000021.8:g.42515638A>T

Select item 14894487976.

rs1489448797 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 21:41143338 (GRCh38)
21:42515265 (GRCh37)
Canonical SPDI:: NC_000021.9:41143337:G:A
Gene:: LINC00323 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000021/3 (GnomAD)
A=0.000156/1 (1000Genomes)
G=0.5/1 (SGDP_PRJ)
HGVS:: NC_000021.9:g.41143338G>A, NC_000021.8:g.42515265G>A, NR_024100.1:n.181C>T

Select item 14891467597.

rs1489146759 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 21:41147497 (GRCh38)
21:42519424 (GRCh37)
Canonical SPDI:: NC_000021.9:41147496:A:G
Gene:: LINC00323 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000021.9:g.41147497A>G, NC_000021.8:g.42519424A>G

Select item 14890861938.

rs1489086193 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 21:41144685 (GRCh38)
21:42516612 (GRCh37)
Canonical SPDI:: NC_000021.9:41144684:G:A
Gene:: LINC00323 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000108/2 (ALFA)
A=0.000029/4 (GnomAD)
A=0.000045/12 (TOPMED)
A=0.000223/1 (Estonian)
HGVS:: NC_000021.9:g.41144685G>A, NC_000021.8:g.42516612G>A

Select item 14862667009.

rs1486266700 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAG>- [Show Flanks]
Chromosome:: 21:41149525 (GRCh38)
21:42521452 (GRCh37)
Canonical SPDI:: NC_000021.9:41149519:AGAAGAAG:AGAAG
Gene:: LINC00323 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGAAG=0./0 (ALFA)
-=0.00005/7 (GnomAD)
-=0.000068/18 (TOPMED)
-=0.000177/3 (TOMMO)
HGVS:: NC_000021.9:g.41149522AAG[1], NC_000021.8:g.42521449AAG[1]

Select item 148619732110.

rs1486197321 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 21:41141065 (GRCh38)
21:42512992 (GRCh37)
Canonical SPDI:: NC_000021.9:41141064:C:G,NC_000021.9:41141064:C:T
Gene:: LINC00323 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000021.9:g.41141065C>G, NC_000021.9:g.41141065C>T, NC_000021.8:g.42512992C>G, NC_000021.8:g.42512992C>T

Select item 148617684111.

rs1486176841 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 21:41141361 (GRCh38)
21:42513288 (GRCh37)
Canonical SPDI:: NC_000021.9:41141360:G:A
Gene:: LINC00323 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000021.9:g.41141361G>A, NC_000021.8:g.42513288G>A

Select item 148592104912.

rs1485921049 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 21:41145612 (GRCh38)
21:42517539 (GRCh37)
Canonical SPDI:: NC_000021.9:41145611:A:G
Gene:: LINC00323 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000021.9:g.41145612A>G, NC_000021.8:g.42517539A>G

Select item 148513433713.

rs1485134337 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 21:41142461 (GRCh38)
21:42514389 (GRCh37)
Canonical SPDI:: NC_000021.9:41142461:T:TT
Gene:: LINC00323 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.41142462dup, NC_000021.8:g.42514389dup, NR_024100.1:n.1057dup

Select item 148497604014.

rs1484976040 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 21:41142568 (GRCh38)
21:42514495 (GRCh37)
Canonical SPDI:: NC_000021.9:41142567:A:G
Gene:: LINC00323 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.41142568A>G, NC_000021.8:g.42514495A>G, NR_024100.1:n.951T>C

Select item 148493840815.

rs1484938408 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 21:41145979 (GRCh38)
21:42517906 (GRCh37)
Canonical SPDI:: NC_000021.9:41145978:G:A,NC_000021.9:41145978:G:T
Gene:: LINC00323 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000849/14 (TOMMO)
HGVS:: NC_000021.9:g.41145979G>A, NC_000021.9:g.41145979G>T, NC_000021.8:g.42517906G>A, NC_000021.8:g.42517906G>T

Select item 148488694216.

rs1484886942 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 21:41147022 (GRCh38)
21:42518949 (GRCh37)
Canonical SPDI:: NC_000021.9:41147021:G:A
Gene:: LINC00323 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000021.9:g.41147022G>A, NC_000021.8:g.42518949G>A

Select item 148372247017.

rs1483722470 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 21:41143263 (GRCh38)
21:42515190 (GRCh37)
Canonical SPDI:: NC_000021.9:41143262:G:A
Gene:: LINC00323 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.41143263G>A, NC_000021.8:g.42515190G>A, NR_024100.1:n.256C>T

Select item 148334680618.

rs1483346806 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 21:41147526 (GRCh38)
21:42519453 (GRCh37)
Canonical SPDI:: NC_000021.9:41147525:T:C,NC_000021.9:41147525:T:G
Gene:: LINC00323 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0./0 (GnomAD)
G=0.000004/1 (TOPMED)
HGVS:: NC_000021.9:g.41147526T>C, NC_000021.9:g.41147526T>G, NC_000021.8:g.42519453T>C, NC_000021.8:g.42519453T>G

Select item 148303368319.

rs1483033683 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 21:41145806 (GRCh38)
21:42517733 (GRCh37)
Canonical SPDI:: NC_000021.9:41145805:C:T
Gene:: LINC00323 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000021.9:g.41145806C>T, NC_000021.8:g.42517733C>T

Select item 148300418120.

rs1483004181 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 21:41147788 (GRCh38)
21:42519715 (GRCh37)
Canonical SPDI:: NC_000021.9:41147787:G:A
Gene:: LINC00323 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000045/12 (TOPMED)
A=0.000071/10 (GnomAD)
HGVS:: NC_000021.9:g.41147788G>A, NC_000021.8:g.42519715G>A

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Items: 1 to 20 of 2008

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