SNP Links for Gene (Select 3021) - SNP

Links from Gene

Items: 1 to 20 of 2169

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Select item 14897004461.

rs1489700446 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:75775951 (GRCh38)
17:73772032 (GRCh37)
Canonical SPDI:: NC_000017.11:75775950:C:T
Gene:: H3-3B (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.75775951C>T, NC_000017.10:g.73772032C>T

Select item 14891368682.

rs1489136868 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 17:75781592 (GRCh38)
17:73777673 (GRCh37)
Canonical SPDI:: NC_000017.11:75781591:T:A
Gene:: H3-3B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000017.11:g.75781592T>A, NC_000017.10:g.73777673T>A

Select item 14889638923.

rs1488963892 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:75781445 (GRCh38)
17:73777526 (GRCh37)
Canonical SPDI:: NC_000017.11:75781444:G:A
Gene:: H3-3B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000017.11:g.75781445G>A, NC_000017.10:g.73777526G>A

Select item 14884461964.

rs1488446196 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:75777791 (GRCh38)
17:73773872 (GRCh37)
Canonical SPDI:: NC_000017.11:75777790:A:G
Gene:: H3-3B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.75777791A>G, NC_000017.10:g.73773872A>G, NM_005324.5:c.*804T>C, NM_005324.4:c.*804T>C, NM_005324.3:c.*804T>C

Select item 14884306845.

rs1488430684 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 17:75778510 (GRCh38)
17:73774591 (GRCh37)
Canonical SPDI:: NC_000017.11:75778509:A:C,NC_000017.11:75778509:A:G
Gene:: H3-3B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000017.11:g.75778510A>C, NC_000017.11:g.75778510A>G, NC_000017.10:g.73774591A>C, NC_000017.10:g.73774591A>G, NM_005324.5:c.*85T>G, NM_005324.5:c.*85T>C, NM_005324.4:c.*85T>G, NM_005324.4:c.*85T>C, NM_005324.3:c.*85T>G, NM_005324.3:c.*85T>C

Select item 14881676466.

rs1488167646 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 17:75780125 (GRCh38)
17:73776206 (GRCh37)
Canonical SPDI:: NC_000017.11:75780124:A:T
Gene:: H3-3B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.75780125A>T, NC_000017.10:g.73776206A>T

Select item 14874985247.

rs1487498524 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GTCTTG [Show Flanks]
Chromosome:: 17:75781172 (GRCh38)
17:73777254 (GRCh37)
Canonical SPDI:: NC_000017.11:75781172:TGGTCTTG:TGGTCTTGGTCTTG
Gene:: H3-3B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGGTCTTGGTCTTG=0./0 (ALFA)
TGGTCT=0.000008/2 (TOPMED)
TGGTCT=0.000014/2 (GnomAD)
HGVS:: NC_000017.11:g.75781175_75781180dup, NC_000017.10:g.73777256_73777261dup

Select item 14874159718.

rs1487415971 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 17:75781484 (GRCh38)
17:73777565 (GRCh37)
Canonical SPDI:: NC_000017.11:75781483:G:A,NC_000017.11:75781483:G:C
Gene:: H3-3B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000017.11:g.75781484G>A, NC_000017.11:g.75781484G>C, NC_000017.10:g.73777565G>A, NC_000017.10:g.73777565G>C

Select item 14872326649.

rs1487232664 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:75777123 (GRCh38)
17:73773204 (GRCh37)
Canonical SPDI:: NC_000017.11:75777122:G:A
Gene:: H3-3B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.75777123G>A, NC_000017.10:g.73773204G>A, NM_005324.5:c.*1472C>T, NM_005324.4:c.*1472C>T, NM_005324.3:c.*1472C>T

Select item 148686831410.

rs1486868314 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:75781674 (GRCh38)
17:73777755 (GRCh37)
Canonical SPDI:: NC_000017.11:75781673:C:T
Gene:: H3-3B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000022/3 (GnomAD)
HGVS:: NC_000017.11:g.75781674C>T, NC_000017.10:g.73777755C>T

Select item 148683085211.

rs1486830852 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTCAT>- [Show Flanks]
Chromosome:: 17:75780270 (GRCh38)
17:73776351 (GRCh37)
Canonical SPDI:: NC_000017.11:75780268:TTTCAT:T
Gene:: H3-3B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
-=0.000019/5 (TOPMED)
HGVS:: NC_000017.11:g.75780270_75780274del, NC_000017.10:g.73776351_73776355del

Select item 148651746212.

rs1486517462 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:75776850 (GRCh38)
17:73772931 (GRCh37)
Canonical SPDI:: NC_000017.11:75776849:G:A
Gene:: H3-3B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000035/1 (TOMMO)
HGVS:: NC_000017.11:g.75776850G>A, NC_000017.10:g.73772931G>A, NM_005324.5:c.*1745C>T, NM_005324.4:c.*1745C>T, NM_005324.3:c.*1745C>T

Select item 148597491913.

rs1485974919 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:75778233 (GRCh38)
17:73774314 (GRCh37)
Canonical SPDI:: NC_000017.11:75778232:A:G
Gene:: H3-3B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.75778233A>G, NC_000017.10:g.73774314A>G, NM_005324.5:c.*362T>C, NM_005324.4:c.*362T>C, NM_005324.3:c.*362T>C

Select item 148597376014.

rs1485973760 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:75781666 (GRCh38)
17:73777747 (GRCh37)
Canonical SPDI:: NC_000017.11:75781665:G:A
Gene:: H3-3B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000015/2 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000017.11:g.75781666G>A, NC_000017.10:g.73777747G>A

Select item 148586163415.

rs1485861634 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:75780804 (GRCh38)
17:73776885 (GRCh37)
Canonical SPDI:: NC_000017.11:75780803:C:T
Gene:: H3-3B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.75780804C>T, NC_000017.10:g.73776885C>T

Select item 148571831016.

rs1485718310 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 17:75781072 (GRCh38)
17:73777153 (GRCh37)
Canonical SPDI:: NC_000017.11:75781071:A:C,NC_000017.11:75781071:A:G
Gene:: H3-3B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000017.11:g.75781072A>C, NC_000017.11:g.75781072A>G, NC_000017.10:g.73777153A>C, NC_000017.10:g.73777153A>G

Select item 148543807417.

rs1485438074 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:75778317 (GRCh38)
17:73774398 (GRCh37)
Canonical SPDI:: NC_000017.11:75778316:C:T
Gene:: H3-3B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.75778317C>T, NC_000017.10:g.73774398C>T, NM_005324.5:c.*278G>A, NM_005324.4:c.*278G>A, NM_005324.3:c.*278G>A

Select item 148519213118.

rs1485192131 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 17:75779885 (GRCh38)
17:73775966 (GRCh37)
Canonical SPDI:: NC_000017.11:75779884:C:G,NC_000017.11:75779884:C:T
Gene:: H3-3B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000019/5 (TOPMED)
G=0.000035/1 (TOMMO)
HGVS:: NC_000017.11:g.75779885C>G, NC_000017.11:g.75779885C>T, NC_000017.10:g.73775966C>G, NC_000017.10:g.73775966C>T, NM_005324.4:c.-239G>C, NM_005324.4:c.-239G>A

Select item 148466577819.

rs1484665778 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:75776041 (GRCh38)
17:73772122 (GRCh37)
Canonical SPDI:: NC_000017.11:75776040:T:C
Gene:: H3-3B (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.75776041T>C, NC_000017.10:g.73772122T>C

Select item 148381582520.

rs1483815825 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: 17:75777171 (GRCh38)
17:73773252 (GRCh37)
Canonical SPDI:: NC_000017.11:75777170:TG:
Gene:: H3-3B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000014/2 (GnomAD)
-=0.00003/8 (TOPMED)
HGVS:: NC_000017.11:g.75777171_75777172del, NC_000017.10:g.73773252_73773253del, NM_005324.5:c.*1423_*1424del, NM_005324.4:c.*1423_*1424del, NM_005324.3:c.*1423_*1424del

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