SNP Links for Gene (Select 3217) - SNP

Links from Gene

Items: 1 to 20 of 1000

<< First< Prev

Page of 50

Next >Last >>

Select item 14913963711.

rs1491396371 has merged into rs201227589 [Homo sapiens]

Variant type:: DELINS
Alleles:: CG>- [Show Flanks]
Chromosome:: 17:48612725 (GRCh38)
17:46690087 (GRCh37)
Canonical SPDI:: NC_000017.11:48612723:GCG:G
Gene:: HOXB7 (Varview), HOXB8 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000061/1 (ALFA)
-=0.000106/2 (TOMMO)
-=0.000121/16 (GnomAD)
HGVS:: NC_000017.11:g.48612725_48612726del, NC_000017.10:g.46690087_46690088del, NM_024016.4:c.*477_*478del, NM_024016.3:c.*477_*478del

Select item 14913238172.

rs1491323817 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>- [Show Flanks]
Chromosome:: 17:48611624 (GRCh38)
17:46688986 (GRCh37)
Canonical SPDI:: NC_000017.11:48611622:AGA:A
Gene:: HOXB7 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.002023/24 (ALFA)
-=0.002292/306 (GnomAD)
HGVS:: NC_000017.11:g.48611624_48611625del, NC_000017.10:g.46688986_46688987del

Select item 14904097543.

rs1490409754 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:48609711 (GRCh38)
17:46687073 (GRCh37)
Canonical SPDI:: NC_000017.11:48609710:C:T
Gene:: HOXB7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000015/4 (TOPMED)
T=0.000035/1 (TOMMO)
HGVS:: NC_000017.11:g.48609711C>T, NC_000017.10:g.46687073C>T, NG_046953.1:g.282G>A

Select item 14903581924.

rs1490358192 [Homo sapiens]

Variant type:: DELINS
Alleles:: AG>- [Show Flanks]
Chromosome:: 17:48609680 (GRCh38)
17:46687042 (GRCh37)
Canonical SPDI:: NC_000017.11:48609675:AGAGAG:AGAG
Gene:: HOXB7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGAG=0./0 (ALFA)
-=0.000034/9 (TOPMED)
-=0.000043/6 (GnomAD)
HGVS:: NC_000017.11:g.48609676AG[2], NC_000017.10:g.46687038AG[2], NG_046953.1:g.312CT[2]

Select item 14903578355.

rs1490357835 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:48607836 (GRCh38)
17:46685198 (GRCh37)
Canonical SPDI:: NC_000017.11:48607835:C:T
Gene:: HOXB7 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.48607836C>T, NC_000017.10:g.46685198C>T, NG_046953.1:g.2157G>A, NM_004502.4:c.*6G>A, NM_004502.3:c.*6G>A

Select item 14900282446.

rs1490028244 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 17:48609558 (GRCh38)
17:46686920 (GRCh37)
Canonical SPDI:: NC_000017.11:48609557:C:A
Gene:: HOXB7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000017.11:g.48609558C>A, NC_000017.10:g.46686920C>A, NG_046953.1:g.435G>T

Select item 14899169597.

rs1489916959 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:48610081 (GRCh38)
17:46687443 (GRCh37)
Canonical SPDI:: NC_000017.11:48610080:G:A
Gene:: HOXB7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000017.11:g.48610081G>A, NC_000017.10:g.46687443G>A

Select item 14897137558.

rs1489713755 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:48608242 (GRCh38)
17:46685604 (GRCh37)
Canonical SPDI:: NC_000017.11:48608241:T:C
Gene:: HOXB7 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000017.11:g.48608242T>C, NC_000017.10:g.46685604T>C, NG_046953.1:g.1751A>G

Select item 14896444989.

rs1489644498 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 17:48610450 (GRCh38)
17:46687812 (GRCh37)
Canonical SPDI:: NC_000017.11:48610449:G:C
Gene:: HOXB7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.48610450G>C, NC_000017.10:g.46687812G>C

Select item 148915898410.

rs1489158984 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:48610601 (GRCh38)
17:46687963 (GRCh37)
Canonical SPDI:: NC_000017.11:48610600:C:T
Gene:: HOXB7 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
HGVS:: NC_000017.11:g.48610601C>T, NC_000017.10:g.46687963C>T, NM_004502.4:c.318G>A, NM_004502.3:c.318G>A

Select item 148878206811.

rs1488782068 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 17:48607787 (GRCh38)
17:46685149 (GRCh37)
Canonical SPDI:: NC_000017.11:48607786:G:A,NC_000017.11:48607786:G:C
Gene:: HOXB7 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.48607787G>A, NC_000017.11:g.48607787G>C, NC_000017.10:g.46685149G>A, NC_000017.10:g.46685149G>C, NG_046953.1:g.2206C>T, NG_046953.1:g.2206C>G, NM_004502.4:c.*55C>T, NM_004502.4:c.*55C>G, NM_004502.3:c.*55C>T, NM_004502.3:c.*55C>G

Select item 148814896812.

rs1488148968 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 17:48610964 (GRCh38)
17:46688326 (GRCh37)
Canonical SPDI:: NC_000017.11:48610963:T:G
Gene:: HOXB7 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.48610964T>G, NC_000017.10:g.46688326T>G, NM_004502.4:c.-46A>C, NM_004502.3:c.-46A>C

Select item 148814350313.

rs1488143503 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 17:48611741 (GRCh38)
17:46689103 (GRCh37)
Canonical SPDI:: NC_000017.11:48611740:C:G
Gene:: HOXB7 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000017.11:g.48611741C>G, NC_000017.10:g.46689103C>G

Select item 148775018814.

rs1487750188 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 17:48607407 (GRCh38)
17:46684769 (GRCh37)
Canonical SPDI:: NC_000017.11:48607406:G:T
Gene:: HOXB7 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.48607407G>T, NC_000017.10:g.46684769G>T, NG_046953.1:g.2586C>A, NM_004502.4:c.*435C>A, NM_004502.3:c.*435C>A

Select item 148710160815.

rs1487101608 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:48611160 (GRCh38)
17:46688522 (GRCh37)
Canonical SPDI:: NC_000017.11:48611159:T:C
Gene:: HOXB7 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000017.11:g.48611160T>C, NC_000017.10:g.46688522T>C

Select item 148708714616.

rs1487087146 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 17:48608195 (GRCh38)
17:46685557 (GRCh37)
Canonical SPDI:: NC_000017.11:48608194:G:A,NC_000017.11:48608194:G:C,NC_000017.11:48608194:G:T
Gene:: HOXB7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.48608195G>A, NC_000017.11:g.48608195G>C, NC_000017.11:g.48608195G>T, NC_000017.10:g.46685557G>A, NC_000017.10:g.46685557G>C, NC_000017.10:g.46685557G>T, NG_046953.1:g.1798C>T, NG_046953.1:g.1798C>G, NG_046953.1:g.1798C>A

Select item 148648370217.

rs1486483702 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 17:48611655 (GRCh38)
17:46689017 (GRCh37)
Canonical SPDI:: NC_000017.11:48611654:T:A
Gene:: HOXB7 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000017.11:g.48611655T>A, NC_000017.10:g.46689017T>A

Select item 148640044218.

rs1486400442 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:48611850 (GRCh38)
17:46689212 (GRCh37)
Canonical SPDI:: NC_000017.11:48611849:G:A
Gene:: HOXB7 (Varview), HOXB8 (Varview)
Functional Consequence:: downstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.48611850G>A, NC_000017.10:g.46689212G>A

Select item 148575213719.

rs1485752137 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 17:48612597 (GRCh38)
17:46689959 (GRCh37)
Canonical SPDI:: NC_000017.11:48612596:G:C,NC_000017.11:48612596:G:T
Gene:: HOXB7 (Varview), HOXB8 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000017.11:g.48612597G>C, NC_000017.11:g.48612597G>T, NC_000017.10:g.46689959G>C, NC_000017.10:g.46689959G>T, NM_024016.4:c.*605C>G, NM_024016.4:c.*605C>A, NM_024016.3:c.*605C>G, NM_024016.3:c.*605C>A

Select item 148486663520.

rs1484866635 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 17:48609451 (GRCh38)
17:46686813 (GRCh37)
Canonical SPDI:: NC_000017.11:48609450:G:T
Gene:: HOXB7 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000017.11:g.48609451G>T, NC_000017.10:g.46686813G>T, NG_046953.1:g.542C>A

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 1000

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity