SNP Links for Gene (Select 3452) - SNP

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Select item 14903710311.

rs1490371031 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 9:21168232 (GRCh38)
9:21168231 (GRCh37)
Canonical SPDI:: NC_000009.12:21168231:T:G
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000023/6 (TOPMED)
G=0.000156/1 (1000Genomes)
HGVS:: NC_000009.12:g.21168232T>G, NC_000009.11:g.21168231T>G, NG_030029.1:g.3429A>C

Select item 14894835922.

rs1489483592 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 9:21166978 (GRCh38)
9:21166977 (GRCh37)
Canonical SPDI:: NC_000009.12:21166977:C:G
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000026/7 (TOPMED)
HGVS:: NC_000009.12:g.21166978C>G, NC_000009.11:g.21166977C>G, NG_030029.1:g.4683G>C

Select item 14894223803.

rs1489422380 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 9:21168451 (GRCh38)
9:21168450 (GRCh37)
Canonical SPDI:: NC_000009.12:21168450:C:G
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.21168451C>G, NC_000009.11:g.21168450C>G, NG_030029.1:g.3210G>C

Select item 14893593014.

rs1489359301 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:21166610 (GRCh38)
9:21166609 (GRCh37)
Canonical SPDI:: NC_000009.12:21166609:C:T
Gene:: IFNA21 (Varview)
Functional Consequence:: initiator_codon_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.21166610C>T, NC_000009.11:g.21166609C>T, NG_030029.1:g.5051G>A, NM_002175.2:c.3G>A, NP_002166.2:p.Met1Ile

Select item 14893291935.

rs1489329193 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 9:21167259 (GRCh38)
9:21167258 (GRCh37)
Canonical SPDI:: NC_000009.12:21167258:A:T
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.21167259A>T, NC_000009.11:g.21167258A>T, NG_030029.1:g.4402T>A

Select item 14888632546.

rs1488863254 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 9:21168616 (GRCh38)
9:21168615 (GRCh37)
Canonical SPDI:: NC_000009.12:21168615:A:C
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.004717/1 (Vietnamese)
HGVS:: NC_000009.12:g.21168616A>C, NC_000009.11:g.21168615A>C, NG_030029.1:g.3045T>G

Select item 14882723597.

rs1488272359 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 9:21167833 (GRCh38)
9:21167832 (GRCh37)
Canonical SPDI:: NC_000009.12:21167832:C:A,NC_000009.12:21167832:C:T
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000009.12:g.21167833C>A, NC_000009.12:g.21167833C>T, NC_000009.11:g.21167832C>A, NC_000009.11:g.21167832C>T, NG_030029.1:g.3828G>T, NG_030029.1:g.3828G>A

Select item 14882101918.

rs1488210191 [Homo sapiens]

Variant type:: DELINS
Alleles:: GTTA>- [Show Flanks]
Chromosome:: 9:21167181 (GRCh38)
9:21167180 (GRCh37)
Canonical SPDI:: NC_000009.12:21167178:TAGTTA:TA
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TA=0./0 (ALFA)
-=0.000014/2 (GnomAD)
-=0.000026/7 (TOPMED)
HGVS:: NC_000009.12:g.21167181_21167184del, NC_000009.11:g.21167180_21167183del, NG_030029.1:g.4479_4482del

Select item 14879182499.

rs1487918249 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 9:21168241 (GRCh38)
9:21168240 (GRCh37)
Canonical SPDI:: NC_000009.12:21168240:G:C
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000009.12:g.21168241G>C, NC_000009.11:g.21168240G>C, NG_030029.1:g.3420C>G

Select item 148772287610.

rs1487722876 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:21166845 (GRCh38)
9:21166844 (GRCh37)
Canonical SPDI:: NC_000009.12:21166844:T:C
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.21166845T>C, NC_000009.11:g.21166844T>C, NG_030029.1:g.4816A>G

Select item 148769277211.

rs1487692772 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:21167588 (GRCh38)
9:21167587 (GRCh37)
Canonical SPDI:: NC_000009.12:21167587:C:T
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.21167588C>T, NC_000009.11:g.21167587C>T, NG_030029.1:g.4073G>A

Select item 148759247212.

rs1487592472 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:21168562 (GRCh38)
9:21168561 (GRCh37)
Canonical SPDI:: NC_000009.12:21168561:T:C
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.21168562T>C, NC_000009.11:g.21168561T>C, NG_030029.1:g.3099A>G

Select item 148739343113.

rs1487393431 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:21166040 (GRCh38)
9:21166039 (GRCh37)
Canonical SPDI:: NC_000009.12:21166039:G:A
Gene:: IFNA21 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.21166040G>A, NC_000009.11:g.21166039G>A, NG_030029.1:g.5621C>T, NM_002175.2:c.*3C>T

Select item 148736985514.

rs1487369855 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:21167930 (GRCh38)
9:21167929 (GRCh37)
Canonical SPDI:: NC_000009.12:21167929:T:C
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.21167930T>C, NC_000009.11:g.21167929T>C, NG_030029.1:g.3731A>G

Select item 148704182915.

rs1487041829 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:21166279 (GRCh38)
9:21166278 (GRCh37)
Canonical SPDI:: NC_000009.12:21166278:G:A
Gene:: IFNA21 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000066/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.21166279G>A, NC_000009.11:g.21166278G>A, NG_030029.1:g.5382C>T, NM_002175.2:c.334C>T, NP_002166.2:p.Leu112Phe

Select item 148703175816.

rs1487031758 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 9:21165384 (GRCh38)
9:21165383 (GRCh37)
Canonical SPDI:: NC_000009.12:21165383:C:G,NC_000009.12:21165383:C:T
Gene:: IFNA21 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000009.12:g.21165384C>G, NC_000009.12:g.21165384C>T, NC_000009.11:g.21165383C>G, NC_000009.11:g.21165383C>T, NG_030029.1:g.6277G>C, NG_030029.1:g.6277G>A

Select item 148645445417.

rs1486454454 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:21165546 (GRCh38)
9:21165545 (GRCh37)
Canonical SPDI:: NC_000009.12:21165545:T:A
Gene:: IFNA21 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.21165546T>A, NC_000009.11:g.21165545T>A, NG_030029.1:g.6115A>T

Select item 148523435418.

rs1485234354 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:21167696 (GRCh38)
9:21167695 (GRCh37)
Canonical SPDI:: NC_000009.12:21167695:G:A
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000066/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.21167696G>A, NC_000009.11:g.21167695G>A, NG_030029.1:g.3965C>T

Select item 148378566919.

rs1483785669 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 9:21168022 (GRCh38)
9:21168021 (GRCh37)
Canonical SPDI:: NC_000009.12:21168021:T:G
Gene:: IFNA21 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.21168022T>G, NC_000009.11:g.21168021T>G, NG_030029.1:g.3639A>C

Select item 148375523520.

rs1483755235 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:21166631 (GRCh38)
9:21166630 (GRCh37)
Canonical SPDI:: NC_000009.12:21166630:G:A
Gene:: IFNA21 (Varview)
Functional Consequence:: 5_prime_UTR_variant
HGVS:: NC_000009.12:g.21166631G>A, NC_000009.11:g.21166630G>A, NG_030029.1:g.5030C>T, NM_002175.2:c.-19C>T

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