SNP Links for Gene (Select 345222) - SNP

Links from Gene

Items: 1 to 20 of 4119

<< First< Prev

Page of 206

Next >Last >>

Select item 14914807491.

rs1491480749 [Homo sapiens]

Variant type:: DEL
Alleles:: AG>- [Show Flanks]
Chromosome:: 4:3253153 (GRCh38)
4:3254880 (GRCh37)
Canonical SPDI:: NC_000004.12:3253152:AG:
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.000071/1 (ALFA)
-=0.000015/4 (TOPMED)
HGVS:: NC_000004.12:g.3253153_3253154del, NC_000004.11:g.3254880_3254881del

Select item 14914336332.

rs1491433633 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 4:3253153 (GRCh38)
4:3254881 (GRCh37)
Canonical SPDI:: NC_000004.12:3253153:GGGG:GGGGG
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GGGGG=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.3253157dup, NC_000004.11:g.3254884dup

Select item 14910145043.

rs1491014504 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 4:3251687 (GRCh38)
4:3253414 (GRCh37)
Canonical SPDI:: NC_000004.12:3251685:TCT:T
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
-=0.000015/2 (GnomAD)
HGVS:: NC_000004.12:g.3251687_3251688del, NC_000004.11:g.3253414_3253415del

Select item 14909201124.

rs1490920112 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:3245242 (GRCh38)
4:3246969 (GRCh37)
Canonical SPDI:: NC_000004.12:3245241:C:T
Gene:: MSANTD1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.3245242C>T, NC_000004.11:g.3246969C>T, NG_009378.1:g.175568C>T, NM_001330620.2:c.-247C>T, NM_001330620.1:c.-247C>T, XM_047415655.1:c.-1413C>T

Select item 14908876985.

rs1490887698 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:3243670 (GRCh38)
4:3245397 (GRCh37)
Canonical SPDI:: NC_000004.12:3243669:C:T
Gene:: HTT (Varview), MSANTD1 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.3243670C>T, NC_000004.11:g.3245397C>T, NG_009378.1:g.173996C>T, NM_002111.8:c.*3611C>T, NM_002111.7:c.*3611C>T, NM_002111.6:c.*3611C>T, NM_001388492.1:c.*3611C>T

Select item 14908515226.

rs1490851522 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:3245781 (GRCh38)
4:3247508 (GRCh37)
Canonical SPDI:: NC_000004.12:3245780:G:A
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000043/6 (GnomAD)
HGVS:: NC_000004.12:g.3245781G>A, NC_000004.11:g.3247508G>A, NG_009378.1:g.176107G>A, XM_047415655.1:c.-874G>A

Select item 14907830757.

rs1490783075 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:3244307 (GRCh38)
4:3246034 (GRCh37)
Canonical SPDI:: NC_000004.12:3244306:T:C
Gene:: HTT (Varview), MSANTD1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.3244307T>C, NC_000004.11:g.3246034T>C, NG_009378.1:g.174633T>C, XM_047415655.1:c.-2348T>C

Select item 14904472448.

rs1490447244 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:3252183 (GRCh38)
4:3253910 (GRCh37)
Canonical SPDI:: NC_000004.12:3252182:G:A
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.3252183G>A, NC_000004.11:g.3253910G>A

Select item 14903593179.

rs1490359317 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 4:3250548 (GRCh38)
4:3252275 (GRCh37)
Canonical SPDI:: NC_000004.12:3250547:GGGG:GGG
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.3250551del, NC_000004.11:g.3252278del

Select item 149028413610.

rs1490284136 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:3252764 (GRCh38)
4:3254491 (GRCh37)
Canonical SPDI:: NC_000004.12:3252763:T:C
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.3252764T>C, NC_000004.11:g.3254491T>C

Select item 148991575811.

rs1489915758 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:3246817 (GRCh38)
4:3248544 (GRCh37)
Canonical SPDI:: NC_000004.12:3246816:G:A
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.3246817G>A, NC_000004.11:g.3248544G>A

Select item 148987264812.

rs1489872648 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:3247454 (GRCh38)
4:3249181 (GRCh37)
Canonical SPDI:: NC_000004.12:3247453:C:T
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000004.12:g.3247454C>T, NC_000004.11:g.3249181C>T

Select item 148957410813.

rs1489574108 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:3246090 (GRCh38)
4:3247817 (GRCh37)
Canonical SPDI:: NC_000004.12:3246089:C:T
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.3246090C>T, NC_000004.11:g.3247817C>T, XM_047415655.1:c.-565C>T

Select item 148919323714.

rs1489193237 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:3252058 (GRCh38)
4:3253785 (GRCh37)
Canonical SPDI:: NC_000004.12:3252057:C:T
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.3252058C>T, NC_000004.11:g.3253785C>T

Select item 148909482915.

rs1489094829 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:3254067 (GRCh38)
4:3255794 (GRCh37)
Canonical SPDI:: NC_000004.12:3254066:A:G
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.3254067A>G, NC_000004.11:g.3255794A>G

Select item 148902039616.

rs1489020396 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 4:3244746 (GRCh38)
4:3246473 (GRCh37)
Canonical SPDI:: NC_000004.12:3244745:A:T
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000004.12:g.3244746A>T, NC_000004.11:g.3246473A>T, NG_009378.1:g.175072A>T, XM_047415655.1:c.-1909A>T

Select item 148886779817.

rs1488867798 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 4:3252606 (GRCh38)
4:3254333 (GRCh37)
Canonical SPDI:: NC_000004.12:3252605:A:
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.3252606del, NC_000004.11:g.3254333del

Select item 148864792918.

rs1488647929 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:3253330 (GRCh38)
4:3255057 (GRCh37)
Canonical SPDI:: NC_000004.12:3253329:G:A
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000111/1 (ALFA)
A=0.000008/2 (GnomAD_exomes)
A=0.000142/2 (TOMMO)
HGVS:: NC_000004.12:g.3253330G>A, NC_000004.11:g.3255057G>A, NM_001330620.2:c.405G>A, NM_001330620.1:c.405G>A, NM_001042690.2:c.444G>A, NM_001042690.1:c.444G>A, NM_001012982.2:c.444G>A, NM_001012982.1:c.444G>A

Select item 148859008219.

rs1488590082 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:3246710 (GRCh38)
4:3248437 (GRCh37)
Canonical SPDI:: NC_000004.12:3246709:C:T
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000017/2 (GnomAD_exomes)
HGVS:: NC_000004.12:g.3246710C>T, NC_000004.11:g.3248437C>T

Select item 148824067720.

rs1488240677 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:3250002 (GRCh38)
4:3251729 (GRCh37)
Canonical SPDI:: NC_000004.12:3250001:G:A
Gene:: MSANTD1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000023/6 (TOPMED)
A=0.000156/1 (1000Genomes)
A=0.000271/38 (GnomAD)
HGVS:: NC_000004.12:g.3250002G>A, NC_000004.11:g.3251729G>A

<< First< Prev

Page of 206

Next >Last >>

dbSNP

Result Filters

Validation Status

Publication

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 4119

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity