Links from Gene
Items: 1 to 20 of 1000
1.
rs1491034537 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CGTGTGTG
[Show Flanks]
- Chromosome:
- 1:206773589
(GRCh38)
1:206946935
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206773589:GTGTGTG:GTGTGTGCGTGTGTG
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GTGTGTGCGTGTGTG=0.00042/5
(
ALFA)
GTGTGTGC=0.00219/99
(GnomAD)
- HGVS:
2.
rs1491004940 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->TA
[Show Flanks]
- Chromosome:
- 1:206773630
(GRCh38)
1:206946976
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206773630:TA:TATA
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
TATA=0./0
(
ALFA)
TA=0.000023/3
(GnomAD)
- HGVS:
3.
rs1490877105 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 1:206773792
(GRCh38)
1:206947137
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206773791:T:C
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency
- MAF:
C=0.000007/1
(GnomAD)
- HGVS:
5.
rs1490015513 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 1:206769297
(GRCh38)
1:206942642
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206769296:T:C
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000007/1
(GnomAD)
C=0.000011/3
(TOPMED)
- HGVS:
6.
rs1489887526 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 1:206768262
(GRCh38)
1:206941607
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206768261:C:G,NC_000001.11:206768261:C:T
- Gene:
- IL10 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,3_prime_UTR_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000011/3
(TOPMED)
- HGVS:
NC_000001.11:g.206768262C>G, NC_000001.11:g.206768262C>T, NC_000001.10:g.206941607C>G, NC_000001.10:g.206941607C>T, NG_012088.1:g.9233G>C, NG_012088.1:g.9233G>A, NM_000572.3:c.*374G>C, NM_000572.3:c.*374G>A, NM_000572.2:c.*374G>C, NM_000572.2:c.*374G>A, NR_168466.1:n.1208G>C, NR_168466.1:n.1208G>A, NM_001382624.1:c.*374G>C, NM_001382624.1:c.*374G>A, NR_168467.1:n.738G>C, NR_168467.1:n.738G>A
7.
rs1489841191 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>A
[Show Flanks]
- Chromosome:
- 1:206771207
(GRCh38)
1:206944552
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206771206:T:A
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
- HGVS:
8.
rs1489173044 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 1:206767679
(GRCh38)
1:206941024
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206767678:A:G
- Gene:
- IL10 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,3_prime_UTR_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000008/2
(TOPMED)
- HGVS:
9.
rs1488200570 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 1:206771444
(GRCh38)
1:206944789
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206771443:T:G
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000011/3
(TOPMED)
G=0.000021/3
(GnomAD)
- HGVS:
10.
rs1488012457 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 1:206769178
(GRCh38)
1:206942523
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206769177:T:C
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000021/3
(GnomAD)
C=0.000023/6
(TOPMED)
- HGVS:
11.
rs1487218773 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G,T
[Show Flanks]
- Chromosome:
- 1:206771902
(GRCh38)
1:206945247
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206771901:A:G,NC_000001.11:206771901:A:T
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000014/2
(GnomAD)
G=0.000035/1
(TOMMO)
- HGVS:
12.
rs1487166100 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 1:206770820
(GRCh38)
1:206944165
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206770819:T:C
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,5_prime_UTR_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
13.
rs1487090769 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 1:206772485
(GRCh38)
1:206945830
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206772484:C:G,NC_000001.11:206772484:C:T
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,5_prime_UTR_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
- HGVS:
NC_000001.11:g.206772485C>G, NC_000001.11:g.206772485C>T, NC_000001.10:g.206945830C>G, NC_000001.10:g.206945830C>T, NG_012088.1:g.5010G>C, NG_012088.1:g.5010G>A, NM_000572.3:c.-50G>C, NM_000572.3:c.-50G>A, NM_000572.2:c.-50G>C, NM_000572.2:c.-50G>A, NR_168466.1:n.10G>C, NR_168466.1:n.10G>A
14.
rs1486622571 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 1:206770970
(GRCh38)
1:206944315
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206770969:G:C
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,coding_sequence_variant,5_prime_UTR_variant,non_coding_transcript_variant,missense_variant,genic_upstream_transcript_variant
- Validated:
- by frequency
- MAF:
C=0.000004/1
(GnomAD_exomes)
- HGVS:
NC_000001.11:g.206770970G>C, NC_000001.10:g.206944315G>C, NG_012088.1:g.6525C>G, NM_000572.3:c.315C>G, NM_000572.2:c.315C>G, NR_168466.1:n.374C>G, NM_001382624.1:c.60C>G, NM_153758.5:c.-257G>C, NM_153758.4:c.-143G>C, NM_153758.3:c.-143G>C, NP_000563.1:p.Ile105Met, NP_001369553.1:p.Ile20Met
15.
rs1486051637 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 1:206773133
(GRCh38)
1:206946478
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206773132:T:G
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000011/3
(TOPMED)
G=0.000014/2
(GnomAD)
- HGVS:
16.
rs1485900824 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 1:206773785
(GRCh38)
1:206947130
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206773784:C:T
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000019/5
(TOPMED)
- HGVS:
17.
rs1485393293 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>A
[Show Flanks]
- Chromosome:
- 1:206770838
(GRCh38)
1:206944183
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206770837:T:A
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,5_prime_UTR_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
- HGVS:
18.
rs1484652409 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 1:206769892
(GRCh38)
1:206943237
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206769891:A:G
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- upstream_transcript_variant,coding_sequence_variant,synonymous_variant,2KB_upstream_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.000028/1
(
ALFA)
G=0.000004/1
(GnomAD_exomes)
G=0.000007/1
(GnomAD)
G=0.000008/2
(TOPMED)
- HGVS:
19.
rs1484428426 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 1:206772228
(GRCh38)
1:206945573
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206772227:C:T
- Gene:
- IL10 (Varview), IL19 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000011/3
(TOPMED)
- HGVS:
20.
rs1483971517 has merged into rs1295041497 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ATTTTT>-,ATTTTTATTTTT
[Show Flanks]
- Chromosome:
- 1:206767741
(GRCh38)
1:206941086
(GRCh37)
- Canonical SPDI:
- NC_000001.11:206767725:TTTATTTTTATTTTTATTTTT:TTTATTTTTATTTTT,NC_000001.11:206767725:TTTATTTTTATTTTTATTTTT:TTTATTTTTATTTTTATTTTTATTTTT
- Gene:
- IL10 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTATTTTTATTTTTATTTTTATTTTT=0./0
(
ALFA)
- HGVS:
NC_000001.11:g.206767729ATTTTT[2], NC_000001.11:g.206767729ATTTTT[4], NC_000001.10:g.206941074ATTTTT[2], NC_000001.10:g.206941074ATTTTT[4], NG_012088.1:g.9752AATAAA[2], NG_012088.1:g.9752AATAAA[4], NM_000572.3:c.*893AATAAA[2], NM_000572.3:c.*893AATAAA[4], NM_000572.2:c.*893AATAAA[2], NM_000572.2:c.*893AATAAA[4], NR_168466.1:n.1727AATAAA[2], NR_168466.1:n.1727AATAAA[4], NM_001382624.1:c.*893AATAAA[2], NM_001382624.1:c.*893AATAAA[4], NR_168467.1:n.1257AATAAA[2], NR_168467.1:n.1257AATAAA[4]