SNP Links for Gene (Select 374879) - SNP

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Items: 1 to 20 of 4763

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Select item 14912192611.

rs1491219261 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>-,AA [Show Flanks]
Chromosome:: 19:9303029 (GRCh38)
19:9413705 (GRCh37)
Canonical SPDI:: NC_000019.10:9303028:AAAAAAA:AAAAAA,NC_000019.10:9303028:AAAAAAA:AAAAAAAA
Gene:: ZNF699 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAA=0./0 (ALFA)
-=0.000022/3 (GnomAD)
HGVS:: NC_000019.10:g.9303035del, NC_000019.10:g.9303035dup, NC_000019.9:g.9413711del, NC_000019.9:g.9413711dup

Select item 14912003662.

rs1491200366 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 19:9292224 (GRCh38)
19:9402900 (GRCh37)
Canonical SPDI:: NC_000019.10:9292222:TAT:T
Gene:: ZNF699 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000427/6 (ALFA)
-=0.00054/143 (TOPMED)
-=0.000713/100 (GnomAD)
TA=0.3/3 (1000Genomes)
HGVS:: NC_000019.10:g.9292224_9292225del, NC_000019.9:g.9402900_9402901del, NM_198535.3:c.*3251_*3252del, NM_198535.2:c.*3251_*3252del

Select item 14909958903.

rs1490995890 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:9310738 (GRCh38)
19:9421414 (GRCh37)
Canonical SPDI:: NC_000019.10:9310737:C:G
Gene:: ZNF699 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.9310738C>G, NC_000019.9:g.9421414C>G

Select item 14908429764.

rs1490842976 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:9308824 (GRCh38)
19:9419500 (GRCh37)
Canonical SPDI:: NC_000019.10:9308823:G:A
Gene:: ZNF699 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.9308824G>A, NC_000019.9:g.9419500G>A

Select item 14908247965.

rs1490824796 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 19:9296592 (GRCh38)
19:9407268 (GRCh37)
Canonical SPDI:: NC_000019.10:9296591:T:G
Gene:: ZNF699 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.9296592T>G, NC_000019.9:g.9407268T>G, NM_198535.3:c.812A>C, NM_198535.2:c.812A>C, NM_198535.1:c.812A>C, NP_940937.1:p.Lys271Thr

Select item 14907394276.

rs1490739427 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:9305120 (GRCh38)
19:9415796 (GRCh37)
Canonical SPDI:: NC_000019.10:9305119:G:A
Gene:: ZNF699 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.9305120G>A, NC_000019.9:g.9415796G>A, NM_198535.3:c.-1C>T, NM_198535.2:c.-1C>T

Select item 14906869247.

rs1490686924 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>- [Show Flanks]
Chromosome:: 19:9298057 (GRCh38)
19:9408733 (GRCh37)
Canonical SPDI:: NC_000019.10:9298055:AGA:A
Gene:: ZNF699 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9298057_9298058del, NC_000019.9:g.9408733_9408734del

Select item 14906313178.

rs1490631317 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 19:9291678 (GRCh38)
19:9402354 (GRCh37)
Canonical SPDI:: NC_000019.10:9291677:T:C,NC_000019.10:9291677:T:G
Gene:: ZNF699 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9291678T>C, NC_000019.10:g.9291678T>G, NC_000019.9:g.9402354T>C, NC_000019.9:g.9402354T>G, NM_198535.3:c.*3797A>G, NM_198535.3:c.*3797A>C, NM_198535.2:c.*3797A>G, NM_198535.2:c.*3797A>C

Select item 14904436699.

rs1490443669 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:9304943 (GRCh38)
19:9415619 (GRCh37)
Canonical SPDI:: NC_000019.10:9304942:A:G
Gene:: ZNF699 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.9304943A>G, NC_000019.9:g.9415619A>G

Select item 149033398410.

rs1490333984 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:9295982 (GRCh38)
19:9406658 (GRCh37)
Canonical SPDI:: NC_000019.10:9295981:C:T
Gene:: ZNF699 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.9295982C>T, NC_000019.9:g.9406658C>T, NM_198535.3:c.1422G>A, NM_198535.2:c.1422G>A, NM_198535.1:c.1422G>A

Select item 149012450911.

rs1490124509 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:9304242 (GRCh38)
19:9414918 (GRCh37)
Canonical SPDI:: NC_000019.10:9304241:T:C
Gene:: ZNF699 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000035/1 (TOMMO)
HGVS:: NC_000019.10:g.9304242T>C, NC_000019.9:g.9414918T>C

Select item 148960202012.

rs1489602020 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:9306293 (GRCh38)
19:9416969 (GRCh37)
Canonical SPDI:: NC_000019.10:9306292:G:A
Gene:: ZNF699 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.9306293G>A, NC_000019.9:g.9416969G>A

Select item 148957088913.

rs1489570889 [Homo sapiens]

Variant type:: SNV:
Alleles:: C>T
Chromosome:: no mapping
Canonical SPDI:

Select item 148943031814.

rs1489430318 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:9300302 (GRCh38)
19:9410978 (GRCh37)
Canonical SPDI:: NC_000019.10:9300301:G:A
Gene:: ZNF699 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.9300302G>A, NC_000019.9:g.9410978G>A

Select item 148939753415.

rs1489397534 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 19:9298135 (GRCh38)
19:9408811 (GRCh37)
Canonical SPDI:: NC_000019.10:9298133:TAT:T
Gene:: ZNF699 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000017/2 (GnomAD)
HGVS:: NC_000019.10:g.9298135_9298136del, NC_000019.9:g.9408811_9408812del

Select item 148938347616.

rs1489383476 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:9296242 (GRCh38)
19:9406918 (GRCh37)
Canonical SPDI:: NC_000019.10:9296241:C:T
Gene:: ZNF699 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000043/6 (GnomAD)
HGVS:: NC_000019.10:g.9296242C>T, NC_000019.9:g.9406918C>T, NM_198535.3:c.1162G>A, NM_198535.2:c.1162G>A, NM_198535.1:c.1162G>A, NP_940937.1:p.Glu388Lys

Select item 148928724217.

rs1489287242 [Homo sapiens]

Variant type:: DELINS
Alleles:: AATTTT>- [Show Flanks]
Chromosome:: 19:9299444 (GRCh38)
19:9410120 (GRCh37)
Canonical SPDI:: NC_000019.10:9299439:TTTTAATTTT:TTTT
Gene:: ZNF699 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TTTT=0./0 (ALFA)
HGVS:: NC_000019.10:g.9299444_9299449del, NC_000019.9:g.9410120_9410125del

Select item 148920396718.

rs1489203967 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:9306568 (GRCh38)
19:9417244 (GRCh37)
Canonical SPDI:: NC_000019.10:9306567:A:G
Gene:: ZNF699 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.9306568A>G, NC_000019.9:g.9417244A>G

Select item 148918739019.

rs1489187390 [Homo sapiens]

Variant type:: DEL
Alleles:: AC>- [Show Flanks]
Chromosome:: 19:9291262 (GRCh38)
19:9401938 (GRCh37)
Canonical SPDI:: NC_000019.10:9291261:AC:
Gene:: ZNF699 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.9291262_9291263del, NC_000019.9:g.9401938_9401939del, NM_198535.3:c.*4212_*4213del, NM_198535.2:c.*4212_*4213del

Select item 148891793920.

rs1488917939 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:9302563 (GRCh38)
19:9413239 (GRCh37)
Canonical SPDI:: NC_000019.10:9302562:G:A
Gene:: ZNF699 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.9302563G>A, NC_000019.9:g.9413239G>A

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