SNP Links for Gene (Select 378949) - SNP

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Links from Gene

Items: 1 to 20 of 32

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Select item 14844660421.

rs1484466042 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: Y:21898471 (GRCh38)
Y:24044618 (GRCh37)
Canonical SPDI:: NC_000024.10:21898470:T:C
Gene:: RBMY1D (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
HGVS:: NC_000024.10:g.21898471T>C, NC_000024.9:g.24044618T>C, NG_004755.2:g.87585T>C

Select item 14324143582.

rs1432414358 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: Y:21901110 (GRCh38)
Y:24047257 (GRCh37)
Canonical SPDI:: NC_000024.10:21901109:C:T
Gene:: RBMY1D (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: C=0.5/3 (SGDP_PRJ)
HGVS:: NC_000024.10:g.21901110C>T, NC_000024.9:g.24047257C>T, NG_004755.2:g.90224C>T

Select item 14300614463.

rs1430061446 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: Y:21880639 (GRCh38)
Y:24026786 (GRCh37)
Canonical SPDI:: NC_000024.10:21880638:A:G
Gene:: RBMY1D (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,synonymous_variant
HGVS:: NC_000024.10:g.21880639A>G, NC_000024.9:g.24026786A>G, NG_004755.2:g.69753A>G, NM_001006120.3:c.1206T>C, NM_001006120.2:c.1206T>C, XM_011531486.2:c.1206T>C, XM_011531486.1:c.1206T>C, XM_011531489.2:c.873T>C, XM_011531489.1:c.873T>C, NM_001320950.1:c.1023T>C, NM_001320949.1:c.1095T>C, XM_047442737.1:c.786T>C

Select item 14173879774.

rs1417387977 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:21890944 (GRCh38)
Y:24037091 (GRCh37)
Canonical SPDI:: NC_000024.10:21890943:G:A
Gene:: RBMY1D (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000024.10:g.21890944G>A, NC_000024.9:g.24037091G>A, NG_004755.2:g.80058G>A

Select item 13771926045.

rs1377192604 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: Y:21890843 (GRCh38)
Y:24036990 (GRCh37)
Canonical SPDI:: NC_000024.10:21890842:TTTTTTTTTTT:TTTTTTTTTT
Gene:: RBMY1D (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000024.10:g.21890853del, NC_000024.9:g.24037000del, NG_004755.2:g.79967del

Select item 13659973836.

rs1365997383 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: Y:21901330 (GRCh38)
Y:24047477 (GRCh37)
Canonical SPDI:: NC_000024.10:21901329:G:T
Gene:: RBMY1D (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000024.10:g.21901330G>T, NC_000024.9:g.24047477G>T, NG_004755.2:g.90444G>T

Select item 13458332077.

rs1345833207 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: Y:21880633 (GRCh38)
Y:24026780 (GRCh37)
Canonical SPDI:: NC_000024.10:21880632:T:C
Gene:: RBMY1D (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,synonymous_variant
HGVS:: NC_000024.10:g.21880633T>C, NC_000024.9:g.24026780T>C, NG_004755.2:g.69747T>C, NM_001006120.3:c.1212A>G, NM_001006120.2:c.1212A>G, XM_011531486.2:c.1212A>G, XM_011531486.1:c.1212A>G, XM_011531489.2:c.879A>G, XM_011531489.1:c.879A>G, NM_001320950.1:c.1029A>G, NM_001320949.1:c.1101A>G, XM_047442737.1:c.792A>G

Select item 13266637068.

rs1326663706 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: Y:21899848 (GRCh38)
Y:24045995 (GRCh37)
Canonical SPDI:: NC_000024.10:21899847:C:T
Gene:: RBMY1D (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
HGVS:: NC_000024.10:g.21899848C>T, NC_000024.9:g.24045995C>T, NG_004755.2:g.88962C>T

Select item 12969815939.

rs1296981593 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:21897708 (GRCh38)
Y:24043855 (GRCh37)
Canonical SPDI:: NC_000024.10:21897707:G:A
Gene:: RBMY1D (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
HGVS:: NC_000024.10:g.21897708G>A, NC_000024.9:g.24043855G>A, NG_004755.2:g.86822G>A

Select item 128736284410.

rs1287362844 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: Y:21880645 (GRCh38)
Y:24026792 (GRCh37)
Canonical SPDI:: NC_000024.10:21880644:A:T
Gene:: RBMY1D (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,synonymous_variant
HGVS:: NC_000024.10:g.21880645A>T, NC_000024.9:g.24026792A>T, NG_004755.2:g.69759A>T, NM_001006120.3:c.1200T>A, NM_001006120.2:c.1200T>A, XM_011531486.2:c.1200T>A, XM_011531486.1:c.1200T>A, XM_011531489.2:c.867T>A, XM_011531489.1:c.867T>A, NM_001320950.1:c.1017T>A, NM_001320949.1:c.1089T>A, XM_047442737.1:c.780T>A

Select item 127231360011.

rs1272313600 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: Y:21901184 (GRCh38)
Y:24047331 (GRCh37)
Canonical SPDI:: NC_000024.10:21901183:C:T
Gene:: RBMY1D (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000024.10:g.21901184C>T, NC_000024.9:g.24047331C>T, NG_004755.2:g.90298C>T

Select item 117422765712.

rs1174227657 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: Y:21890699 (GRCh38)
Y:24036846 (GRCh37)
Canonical SPDI:: NC_000024.10:21890698:GG:G
Gene:: RBMY1D (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000024.10:g.21890700del, NC_000024.9:g.24036847del, NG_004755.2:g.79814del

Select item 87921071013.

rs879210710 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: Y:21880565 (GRCh38)
Y:24026712 (GRCh37)
Canonical SPDI:: NC_000024.10:21880564:C:G
Gene:: RBMY1D (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
HGVS:: NC_000024.10:g.21880565C>G, NC_000024.9:g.24026712C>G, NG_004755.2:g.69679C>G, NM_001006120.3:c.1280G>C, NM_001006120.2:c.1280G>C, XM_011531486.2:c.1280G>C, XM_011531486.1:c.1280G>C, XM_011531489.2:c.947G>C, XM_011531489.1:c.947G>C, NM_001320950.1:c.1097G>C, NM_001320949.1:c.1169G>C, XM_047442737.1:c.860G>C, NP_001006120.2:p.Arg427Thr, XP_011529788.1:p.Arg427Thr, XP_011529791.1:p.Arg316Thr, NP_001307879.1:p.Arg366Thr, NP_001307878.1:p.Arg390Thr, XP_047298693.1:p.Arg287Thr

Select item 87914612214.

rs879146122 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: Y:21879922 (GRCh38)
Y:24026069 (GRCh37)
Canonical SPDI:: NC_000024.10:21879921:C:G
Gene:: RBMY1D (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,downstream_transcript_variant
HGVS:: NC_000024.10:g.21879922C>G, NC_000024.9:g.24026069C>G, NG_004755.2:g.69036C>G

Select item 87891684415.

rs878916844 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:21885369 (GRCh38)
Y:24031516 (GRCh37)
Canonical SPDI:: NC_000024.10:21885368:G:A
Gene:: RBMY1D (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000024.10:g.21885369G>A, NC_000024.9:g.24031516G>A, NG_004755.2:g.74483G>A

Select item 79693878616.

rs796938786 [Homo sapiens]

Variant type:: SNV:
Alleles:: C>T
Chromosome:: no mapping
Canonical SPDI:

Select item 79615195817.

rs796151958 [Homo sapiens]

Variant type:: SNV:
Alleles:: T>C
Chromosome:: no mapping
Canonical SPDI:

Select item 74696992318.

rs746969923 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: Y:21900686 (GRCh38)
Y:24046833 (GRCh37)
Canonical SPDI:: NC_000024.10:21900685:C:T
Gene:: RBMY1D (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: T=0.25/5 (GENOME_DK)
HGVS:: NC_000024.10:g.21900686C>T, NC_000024.9:g.24046833C>T, NG_004755.2:g.89800C>T

Select item 37178415619.

rs371784156 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: Y:21899886 (GRCh38)
Y:24046033 (GRCh37)
Canonical SPDI:: NC_000024.10:21899885:C:G
Gene:: RBMY1D (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
HGVS:: NC_000024.10:g.21899886C>G, NC_000024.9:g.24046033C>G, NG_004755.2:g.89000C>G

Select item 36844909420.

rs368449094 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: Y:21897926 (GRCh38)
Y:24044073 (GRCh37)
Canonical SPDI:: NC_000024.10:21897925:T:C
Gene:: RBMY1D (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by cluster
HGVS:: NC_000024.10:g.21897926T>C, NC_000024.9:g.24044073T>C, NG_004755.2:g.87040T>C