SNP Links for Gene (Select 387751) - SNP

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Select item 14915037861.

rs1491503786 [Homo sapiens]

Variant type:: DEL
Alleles:: TC>- [Show Flanks]
Chromosome:: 11:6713151 (GRCh38)
11:6734382 (GRCh37)
Canonical SPDI:: NC_000011.10:6713150:TC:
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.005311/63 (ALFA)
-=0.000495/8 (TOMMO)
-=0.008539/1066 (GnomAD)
-=0.047046/86 (Korea1K)
HGVS:: NC_000011.10:g.6713151_6713152del, NC_000011.9:g.6734382_6734383del, NR_003945.1:n.8728_8729del

Select item 14912442082.

rs1491244208 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 11:6713150 (GRCh38)
11:6734382 (GRCh37)
Canonical SPDI:: NC_000011.10:6713150::C
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000016/2 (GnomAD)
HGVS:: NC_000011.10:g.6713150_6713151insC, NC_000011.9:g.6734381_6734382insC, NR_003945.1:n.8729_8730insG

Select item 14909645133.

rs1490964513 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:6720979 (GRCh38)
11:6742210 (GRCh37)
Canonical SPDI:: NC_000011.10:6720978:A:G
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.6720979A>G, NC_000011.9:g.6742210A>G, NR_003945.1:n.901T>C

Select item 14909460774.

rs1490946077 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 11:6716380 (GRCh38)
11:6737611 (GRCh37)
Canonical SPDI:: NC_000011.10:6716379:A:C
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.6716380A>C, NC_000011.9:g.6737611A>C, NR_003945.1:n.5500T>G, NM_025006.1:c.-381T>G

Select item 14908512615.

rs1490851261 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:6722026 (GRCh38)
11:6743257 (GRCh37)
Canonical SPDI:: NC_000011.10:6722025:A:G
Gene:: GVINP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.6722026A>G, NC_000011.9:g.6743257A>G

Select item 14905733226.

rs1490573322 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:6713300 (GRCh38)
11:6734531 (GRCh37)
Canonical SPDI:: NC_000011.10:6713299:A:T
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.6713300A>T, NC_000011.9:g.6734531A>T, NR_003945.1:n.8580T>A

Select item 14901476357.

rs1490147635 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:6721486 (GRCh38)
11:6742717 (GRCh37)
Canonical SPDI:: NC_000011.10:6721485:C:T
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.6721486C>T, NC_000011.9:g.6742717C>T, NR_003945.1:n.394G>A

Select item 14900342868.

rs1490034286 [Homo sapiens]

Variant type:: DEL
Alleles:: ACTC>- [Show Flanks]
Chromosome:: 11:6722403 (GRCh38)
11:6743634 (GRCh37)
Canonical SPDI:: NC_000011.10:6722402:ACTC:
Gene:: GVINP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.6722403_6722406del, NC_000011.9:g.6743634_6743637del

Select item 14899168589.

rs1489916858 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:6723101 (GRCh38)
11:6744332 (GRCh37)
Canonical SPDI:: NC_000011.10:6723100:C:G
Gene:: GVINP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000011.10:g.6723101C>G, NC_000011.9:g.6744332C>G

Select item 148983800810.

rs1489838008 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:6715199 (GRCh38)
11:6736430 (GRCh37)
Canonical SPDI:: NC_000011.10:6715198:C:G
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.6715199C>G, NC_000011.9:g.6736430C>G, NR_003945.1:n.6681G>C, NM_025006.1:c.801G>C

Select item 148971923811.

rs1489719238 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:6713689 (GRCh38)
11:6734920 (GRCh37)
Canonical SPDI:: NC_000011.10:6713688:G:C
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.6713689G>C, NC_000011.9:g.6734920G>C, NR_003945.1:n.8191C>G

Select item 148923876312.

rs1489238763 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 11:6723451 (GRCh38)
11:6744682 (GRCh37)
Canonical SPDI:: NC_000011.10:6723450:C:A,NC_000011.10:6723450:C:T
Gene:: GVINP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000043/6 (GnomAD)
HGVS:: NC_000011.10:g.6723451C>A, NC_000011.10:g.6723451C>T, NC_000011.9:g.6744682C>A, NC_000011.9:g.6744682C>T

Select item 148909090913.

rs1489090909 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 11:6713639 (GRCh38)
11:6734870 (GRCh37)
Canonical SPDI:: NC_000011.10:6713638:A:G,NC_000011.10:6713638:A:T
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000008/1 (GnomAD)
T=0.006502/19 (KOREAN)
HGVS:: NC_000011.10:g.6713639A>G, NC_000011.10:g.6713639A>T, NC_000011.9:g.6734870A>G, NC_000011.9:g.6734870A>T, NR_003945.1:n.8241T>C, NR_003945.1:n.8241T>A

Select item 148905928614.

rs1489059286 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:6714838 (GRCh38)
11:6736069 (GRCh37)
Canonical SPDI:: NC_000011.10:6714837:C:A
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000011.10:g.6714838C>A, NC_000011.9:g.6736069C>A, NR_003945.1:n.7042G>T, NM_025006.1:c.1162G>T

Select item 148904149215.

rs1489041492 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:6715752 (GRCh38)
11:6736983 (GRCh37)
Canonical SPDI:: NC_000011.10:6715751:A:G
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000111/1 (ALFA)
G=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.6715752A>G, NC_000011.9:g.6736983A>G, NR_003945.1:n.6128T>C, NM_025006.1:c.248T>C

Select item 148894719016.

rs1488947190 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:6714660 (GRCh38)
11:6735891 (GRCh37)
Canonical SPDI:: NC_000011.10:6714659:C:A
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by cluster
HGVS:: NC_000011.10:g.6714660C>A, NC_000011.9:g.6735891C>A, NR_003945.1:n.7220G>T, NM_025006.1:c.1340G>T

Select item 148883521317.

rs1488835213 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:6718429 (GRCh38)
11:6739660 (GRCh37)
Canonical SPDI:: NC_000011.10:6718428:C:T
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.00003/8 (TOPMED)
T=0.000079/11 (GnomAD_exomes)
HGVS:: NC_000011.10:g.6718429C>T, NC_000011.9:g.6739660C>T, NR_003945.1:n.3451G>A

Select item 148803006318.

rs1488030063 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:6720340 (GRCh38)
11:6741571 (GRCh37)
Canonical SPDI:: NC_000011.10:6720339:T:G
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000011.10:g.6720340T>G, NC_000011.9:g.6741571T>G, NR_003945.1:n.1540A>C

Select item 148798680719.

rs1487986807 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:6723482 (GRCh38)
11:6744713 (GRCh37)
Canonical SPDI:: NC_000011.10:6723481:T:C
Gene:: GVINP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000011.10:g.6723482T>C, NC_000011.9:g.6744713T>C

Select item 148791187220.

rs1487911872 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:6716089 (GRCh38)
11:6737320 (GRCh37)
Canonical SPDI:: NC_000011.10:6716088:C:T
Gene:: GVINP1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000007/1 (GnomAD_exomes)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.6716089C>T, NC_000011.9:g.6737320C>T, NR_003945.1:n.5791G>A, NM_025006.1:c.-90G>A

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