SNP Links for Gene (Select 390436) - SNP

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Select item 14889894531.

rs1488989453 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 14:20116092 (GRCh38)
14:20584251 (GRCh37)
Canonical SPDI:: NC_000014.9:20116091:G:A,NC_000014.9:20116091:G:T
Gene:: OR4K17 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000014.9:g.20116092G>A, NC_000014.9:g.20116092G>T, NW_025791796.1:g.318773G>A, NW_025791796.1:g.318773G>T, NC_000014.8:g.20584251G>A, NC_000014.8:g.20584251G>T

Select item 14888757712.

rs1488875771 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 14:20117132 (GRCh38)
14:20585291 (GRCh37)
Canonical SPDI:: NC_000014.9:20117131:C:G
Gene:: OR4K17 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000014.9:g.20117132C>G, NW_025791796.1:g.319813C>G, NC_000014.8:g.20585291C>G

Select item 14878174413.

rs1487817441 [Homo sapiens]

Variant type:: DELINS
Alleles:: GACACACACACA>- [Show Flanks]
Chromosome:: 14:20116353 (GRCh38)
14:20584512 (GRCh37)
Canonical SPDI:: NC_000014.9:20116343:ACACACACAGACACACACACA:ACACACACA
Gene:: OR4K17 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: ACACACACA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20116353_20116364del, NW_025791796.1:g.319034_319045del, NC_000014.8:g.20584512_20584523del

Select item 14877947414.

rs1487794741 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:20115639 (GRCh38)
14:20583798 (GRCh37)
Canonical SPDI:: NC_000014.9:20115638:G:A
Gene:: OR4K17 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.20115639G>A, NW_025791796.1:g.318320G>A, NC_000014.8:g.20583798G>A

Select item 14873509255.

rs1487350925 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:20115501 (GRCh38)
14:20583660 (GRCh37)
Canonical SPDI:: NC_000014.9:20115500:A:G
Gene:: OR4K17 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000014.9:g.20115501A>G, NW_025791796.1:g.318182A>G, NC_000014.8:g.20583660A>G

Select item 14869064896.

rs1486906489 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:20118009 (GRCh38)
14:20586168 (GRCh37)
Canonical SPDI:: NC_000014.9:20118008:T:C
Gene:: OR4K17 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20118009T>C, NW_025791796.1:g.320690T>C, NC_000014.8:g.20586168T>C, NM_001004715.5:c.510T>C, NM_001004715.4:c.519T>C, NM_001004715.3:c.519T>C, NM_001004715.2:c.519T>C, NM_001004715.1:c.603T>C

Select item 14846494097.

rs1484649409 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 14:20118617 (GRCh38)
14:20586776 (GRCh37)
Canonical SPDI:: NC_000014.9:20118616:A:C
Gene:: OR4K17 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000019/5 (TOPMED)
HGVS:: NC_000014.9:g.20118617A>C, NW_025791796.1:g.321298A>C, NC_000014.8:g.20586776A>C, NM_001004715.5:c.*179A>C, NM_001004715.4:c.*179A>C, NM_001004715.3:c.*179A>C

Select item 14823293978.

rs1482329397 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 14:20118859 (GRCh38)
14:20587018 (GRCh37)
Canonical SPDI:: NC_000014.9:20118858:T:A
Gene:: OR4K17 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20118859T>A, NW_025791796.1:g.321540T>A, NC_000014.8:g.20587018T>A, NM_001004715.5:c.*421T>A, NM_001004715.4:c.*421T>A, NM_001004715.3:c.*421T>A

Select item 14813371869.

rs1481337186 has merged into rs925438574 [Homo sapiens]

Variant type:: DELINS
Alleles:: CA>-,CACA [Show Flanks]
Chromosome:: 14:20116363 (GRCh38)
14:20584522 (GRCh37)
Canonical SPDI:: NC_000014.9:20116353:ACACACACACA:ACACACACA,NC_000014.9:20116353:ACACACACACA:ACACACACACACA
Gene:: OR4K17 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACACACACACACA=0./0 (ALFA)
HGVS:: NC_000014.9:g.20116355CA[4], NC_000014.9:g.20116355CA[6], NW_025791796.1:g.319036CA[4], NW_025791796.1:g.319036CA[6], NC_000014.8:g.20584514CA[4], NC_000014.8:g.20584514CA[6]

Select item 147885700210.

rs1478857002 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 14:20118751 (GRCh38)
14:20586910 (GRCh37)
Canonical SPDI:: NC_000014.9:20118750:A:C,NC_000014.9:20118750:A:G
Gene:: OR4K17 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.20118751A>C, NC_000014.9:g.20118751A>G, NW_025791796.1:g.321432A>C, NW_025791796.1:g.321432A>G, NC_000014.8:g.20586910A>C, NC_000014.8:g.20586910A>G, NM_001004715.5:c.*313A>C, NM_001004715.5:c.*313A>G, NM_001004715.4:c.*313A>C, NM_001004715.4:c.*313A>G, NM_001004715.3:c.*313A>C, NM_001004715.3:c.*313A>G

Select item 147883069911.

rs1478830699 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:20116640 (GRCh38)
14:20584799 (GRCh37)
Canonical SPDI:: NC_000014.9:20116639:A:G
Gene:: OR4K17 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.20116640A>G, NW_025791796.1:g.319321A>G, NC_000014.8:g.20584799A>G

Select item 147863274312.

rs1478632743 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:20116219 (GRCh38)
14:20584378 (GRCh37)
Canonical SPDI:: NC_000014.9:20116218:T:C
Gene:: OR4K17 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000014.9:g.20116219T>C, NW_025791796.1:g.318900T>C, NC_000014.8:g.20584378T>C

Select item 147699532313.

rs1476995323 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAT>- [Show Flanks]
Chromosome:: 14:20115625 (GRCh38)
14:20583784 (GRCh37)
Canonical SPDI:: NC_000014.9:20115622:ATGAT:AT
Gene:: OR4K17 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AT=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000011/3 (TOPMED)
HGVS:: NC_000014.9:g.20115625_20115627del, NW_025791796.1:g.318306_318308del, NC_000014.8:g.20583784_20583786del

Select item 147688637714.

rs1476886377 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20116920 (GRCh38)
14:20585079 (GRCh37)
Canonical SPDI:: NC_000014.9:20116919:C:T
Gene:: OR4K17 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000014.9:g.20116920C>T, NW_025791796.1:g.319601C>T, NC_000014.8:g.20585079C>T

Select item 147478514515.

rs1474785145 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 14:20118278 (GRCh38)
14:20586437 (GRCh37)
Canonical SPDI:: NC_000014.9:20118277:G:C
Gene:: OR4K17 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000014.9:g.20118278G>C, NW_025791796.1:g.320959G>C, NC_000014.8:g.20586437G>C, NM_001004715.5:c.779G>C, NM_001004715.4:c.788G>C, NM_001004715.3:c.788G>C, NM_001004715.2:c.788G>C, NM_001004715.1:c.872G>C, NP_001004715.3:p.Trp260Ser

Select item 147443777416.

rs1474437774 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20118422 (GRCh38)
14:20586581 (GRCh37)
Canonical SPDI:: NC_000014.9:20118421:C:T
Gene:: OR4K17 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000014.9:g.20118422C>T, NW_025791796.1:g.321103C>T, NC_000014.8:g.20586581C>T, NM_001004715.5:c.923C>T, NM_001004715.4:c.932C>T, NM_001004715.3:c.932C>T, NM_001004715.2:c.932C>T, NM_001004715.1:c.1016C>T, NP_001004715.3:p.Ser308Phe

Select item 147435729417.

rs1474357294 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:20117742 (GRCh38)
14:20585901 (GRCh37)
Canonical SPDI:: NC_000014.9:20117741:G:A
Gene:: OR4K17 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20117742G>A, NW_025791796.1:g.320423G>A, NC_000014.8:g.20585901G>A, NM_001004715.5:c.243G>A, NM_001004715.4:c.252G>A, NM_001004715.3:c.252G>A, NM_001004715.2:c.252G>A, NM_001004715.1:c.336G>A

Select item 147279946118.

rs1472799461 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 14:20117151 (GRCh38)
14:20585310 (GRCh37)
Canonical SPDI:: NC_000014.9:20117150:C:A
Gene:: OR4K17 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.20117151C>A, NW_025791796.1:g.319832C>A, NC_000014.8:g.20585310C>A

Select item 147033461819.

rs1470334618 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 14:20118840 (GRCh38)
14:20586999 (GRCh37)
Canonical SPDI:: NC_000014.9:20118839:T:G
Gene:: OR4K17 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20118840T>G, NW_025791796.1:g.321521T>G, NC_000014.8:g.20586999T>G, NM_001004715.5:c.*402T>G, NM_001004715.4:c.*402T>G, NM_001004715.3:c.*402T>G

Select item 146758362120.

rs1467583621 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20118656 (GRCh38)
14:20586815 (GRCh37)
Canonical SPDI:: NC_000014.9:20118655:C:T
Gene:: OR4K17 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000014.9:g.20118656C>T, NW_025791796.1:g.321337C>T, NC_000014.8:g.20586815C>T, NM_001004715.5:c.*218C>T, NM_001004715.4:c.*218C>T, NM_001004715.3:c.*218C>T

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