SNP Links for Gene (Select 390539) - SNP

Links from Gene

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Select item 14909997531.

rs1490999753 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 15:22126214 (GRCh38)
15:22414165 (GRCh37)
Canonical SPDI:: NC_000015.10:22126213:A:C
Gene:: OR4N3P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.22126214A>C, NC_000015.9:g.22414165A>C, NR_028067.1:n.704A>C

Select item 14905151312.

rs1490515131 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:22123957 (GRCh38)
15:22411908 (GRCh37)
Canonical SPDI:: NC_000015.10:22123956:T:C
Gene:: OR4N3P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.22123957T>C, NC_000015.9:g.22411908T>C

Select item 14901981363.

rs1490198136 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 15:22126697 (GRCh38)
15:22414648 (GRCh37)
Canonical SPDI:: NC_000015.10:22126696:G:T
Gene:: OR4N3P (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by cluster
MAF:: T=0.00342/10 (KOREAN)
T=0.00674/113 (TOMMO)
HGVS:: NC_000015.10:g.22126697G>T, NC_000015.9:g.22414648G>T

Select item 14881591654.

rs1488159165 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:22126837 (GRCh38)
15:22414788 (GRCh37)
Canonical SPDI:: NC_000015.10:22126836:A:G
Gene:: OR4N3P (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.00005/4 (GnomAD)
HGVS:: NC_000015.10:g.22126837A>G, NC_000015.9:g.22414788A>G

Select item 14879111545.

rs1487911154 [Homo sapiens]

Variant type:: SNV:
Alleles:: T>C
Chromosome:: no mapping
Canonical SPDI:

Select item 14869257186.

rs1486925718 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:22124159 (GRCh38)
15:22412110 (GRCh37)
Canonical SPDI:: NC_000015.10:22124158:A:G
Gene:: OR4N3P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.00032/6 (ALFA)
G=0.00022/16 (GnomAD)
HGVS:: NC_000015.10:g.22124159A>G, NC_000015.9:g.22412110A>G

Select item 14859925007.

rs1485992500 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 15:22123604 (GRCh38)
15:22411555 (GRCh37)
Canonical SPDI:: NC_000015.10:22123603:A:G,NC_000015.10:22123603:A:T
Gene:: OR4N3P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.00155/26 (TOMMO)
A=0.5/1 (SGDP_PRJ)
HGVS:: NC_000015.10:g.22123604A>G, NC_000015.10:g.22123604A>T, NC_000015.9:g.22411555A>G, NC_000015.9:g.22411555A>T

Select item 14859407418.

rs1485940741 [Homo sapiens]

Variant type:: SNV:
Alleles:: T>C
Chromosome:: no mapping
Canonical SPDI:

Select item 14853906619.

rs1485390661 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 15:22124624 (GRCh38)
15:22412575 (GRCh37)
Canonical SPDI:: NC_000015.10:22124623:T:A
Gene:: OR4N3P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000015.10:g.22124624T>A, NC_000015.9:g.22412575T>A

Select item 148496129910.

rs1484961299 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:22125148 (GRCh38)
15:22413099 (GRCh37)
Canonical SPDI:: NC_000015.10:22125147:A:G
Gene:: OR4N3P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000019/2 (GnomAD)
HGVS:: NC_000015.10:g.22125148A>G, NC_000015.9:g.22413099A>G

Select item 148174689611.

rs1481746896 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:22123532 (GRCh38)
15:22411483 (GRCh37)
Canonical SPDI:: NC_000015.10:22123531:G:A
Gene:: OR4N3P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.00008/4 (GnomAD)
HGVS:: NC_000015.10:g.22123532G>A, NC_000015.9:g.22411483G>A

Select item 148160918512.

rs1481609185 [Homo sapiens]

Variant type:: SNV:
Alleles:: A>G
Chromosome:: no mapping
Canonical SPDI:

Select item 148081790713.

rs1480817907 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 15:22124075 (GRCh38)
15:22412026 (GRCh37)
Canonical SPDI:: NC_000015.10:22124074:G:A,NC_000015.10:22124074:G:T
Gene:: OR4N3P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000015.10:g.22124075G>A, NC_000015.10:g.22124075G>T, NC_000015.9:g.22412026G>A, NC_000015.9:g.22412026G>T

Select item 147966830914.

rs1479668309 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:22125667 (GRCh38)
15:22413618 (GRCh37)
Canonical SPDI:: NC_000015.10:22125666:C:T
Gene:: OR4N3P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00001/1 (GnomAD)
T=0.00034/1 (KOREAN)
HGVS:: NC_000015.10:g.22125667C>T, NC_000015.9:g.22413618C>T, NR_028067.1:n.157C>T

Select item 147945334215.

rs1479453342 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:22124687 (GRCh38)
15:22412638 (GRCh37)
Canonical SPDI:: NC_000015.10:22124686:T:C
Gene:: OR4N3P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000015.10:g.22124687T>C, NC_000015.9:g.22412638T>C

Select item 147836397216.

rs1478363972 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 15:22125302 (GRCh38)
15:22413253 (GRCh37)
Canonical SPDI:: NC_000015.10:22125301:G:C
Gene:: OR4N3P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0.00008/1 (ALFA)
HGVS:: NC_000015.10:g.22125302G>C, NC_000015.9:g.22413253G>C

Select item 147834699317.

rs1478346993 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:22125930 (GRCh38)
15:22413881 (GRCh37)
Canonical SPDI:: NC_000015.10:22125929:C:T
Gene:: OR4N3P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.22125930C>T, NC_000015.9:g.22413881C>T, NR_028067.1:n.420C>T

Select item 147794473618.

rs1477944736 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 15:22126489 (GRCh38)
15:22414440 (GRCh37)
Canonical SPDI:: NC_000015.10:22126488:G:C,NC_000015.10:22126488:G:T
Gene:: OR4N3P (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000028/3 (GnomAD)
C=0.000684/2 (KOREAN)
HGVS:: NC_000015.10:g.22126489G>C, NC_000015.10:g.22126489G>T, NC_000015.9:g.22414440G>C, NC_000015.9:g.22414440G>T

Select item 147739360019.

rs1477393600 [Homo sapiens]

Variant type:: SNV:
Alleles:: ATT>-
Chromosome:: no mapping
Canonical SPDI:

Select item 147715089820.

rs1477150898 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 15:22125748 (GRCh38)
15:22413699 (GRCh37)
Canonical SPDI:: NC_000015.10:22125747:A:C
Gene:: OR4N3P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: C=0.000004/1 (GnomAD_exomes)
A=0.5/1 (SGDP_PRJ)
HGVS:: NC_000015.10:g.22125748A>C, NC_000015.9:g.22413699A>C, NR_028067.1:n.238A>C

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