SNP Links for Gene (Select 390756) - SNP

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Select item 14893952411.

rs1489395241 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 17:3311284 (GRCh38)
17:3214578 (GRCh37)
Canonical SPDI:: NC_000017.11:3311283:T:C,NC_000017.11:3311283:T:G
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.3311284T>C, NC_000017.11:g.3311284T>G, NC_000017.10:g.3214578T>C, NC_000017.10:g.3214578T>G, NG_031881.1:g.185T>C, NG_031881.1:g.185T>G, NR_024128.1:n.1040T>C, NR_024128.1:n.1040T>G, NM_001005334.1:c.974T>C, NM_001005334.1:c.974T>G

Select item 14891723932.

rs1489172393 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 17:3311688 (GRCh38)
17:3214982 (GRCh37)
Canonical SPDI:: NC_000017.11:3311687:T:G
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.3311688T>G, NC_000017.10:g.3214982T>G, NG_031881.1:g.589T>G

Select item 14884215873.

rs1488421587 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:3311830 (GRCh38)
17:3215124 (GRCh37)
Canonical SPDI:: NC_000017.11:3311829:A:G
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.3311830A>G, NC_000017.10:g.3215124A>G, NG_031881.1:g.731A>G

Select item 14883297804.

rs1488329780 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 17:3310721 (GRCh38)
17:3214015 (GRCh37)
Canonical SPDI:: NC_000017.11:3310720:C:A,NC_000017.11:3310720:C:G
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000023/6 (TOPMED)
G=0.000035/1 (TOMMO)
HGVS:: NC_000017.11:g.3310721C>A, NC_000017.11:g.3310721C>G, NC_000017.10:g.3214015C>A, NC_000017.10:g.3214015C>G, NR_024128.1:n.477C>A, NR_024128.1:n.477C>G, NM_001005334.1:c.411C>A, NM_001005334.1:c.411C>G

Select item 14877616335.

rs1487761633 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:3311598 (GRCh38)
17:3214892 (GRCh37)
Canonical SPDI:: NC_000017.11:3311597:G:A
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.3311598G>A, NC_000017.10:g.3214892G>A, NG_031881.1:g.499G>A

Select item 14876174146.

rs1487617414 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 17:3309104 (GRCh38)
17:3212398 (GRCh37)
Canonical SPDI:: NC_000017.11:3309103:C:A
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.3309104C>A, NC_000017.10:g.3212398C>A

Select item 14866257977.

rs1486625797 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:3308420 (GRCh38)
17:3211714 (GRCh37)
Canonical SPDI:: NC_000017.11:3308419:C:T
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000036/5 (GnomAD)
HGVS:: NC_000017.11:g.3308420C>T, NC_000017.10:g.3211714C>T

Select item 14839690268.

rs1483969026 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:3311286 (GRCh38)
17:3214580 (GRCh37)
Canonical SPDI:: NC_000017.11:3311285:C:T
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.3311286C>T, NC_000017.10:g.3214580C>T, NG_031881.1:g.187C>T, NR_024128.1:n.1042C>T, NM_001005334.1:c.976C>T

Select item 14824478319.

rs1482447831 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 17:3308272 (GRCh38)
17:3211566 (GRCh37)
Canonical SPDI:: NC_000017.11:3308271:G:C,NC_000017.11:3308271:G:T
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
C=0.000035/1 (TOMMO)
HGVS:: NC_000017.11:g.3308272G>C, NC_000017.11:g.3308272G>T, NC_000017.10:g.3211566G>C, NC_000017.10:g.3211566G>T

Select item 148224654810.

rs1482246548 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:3309392 (GRCh38)
17:3212686 (GRCh37)
Canonical SPDI:: NC_000017.11:3309391:G:A
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000017.11:g.3309392G>A, NC_000017.10:g.3212686G>A

Select item 147995027611.

rs1479950276 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 17:3311396 (GRCh38)
17:3214690 (GRCh37)
Canonical SPDI:: NC_000017.11:3311395:C:A
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
HGVS:: NC_000017.11:g.3311396C>A, NC_000017.10:g.3214690C>A, NG_031881.1:g.297C>A, NR_024128.1:n.1152C>A

Select item 147789218012.

rs1477892180 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:3310849 (GRCh38)
17:3214143 (GRCh37)
Canonical SPDI:: NC_000017.11:3310848:T:C
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.3310849T>C, NC_000017.10:g.3214143T>C, NR_024128.1:n.605T>C, NM_001005334.1:c.539T>C

Select item 147690844613.

rs1476908446 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 17:3311269 (GRCh38)
17:3214563 (GRCh37)
Canonical SPDI:: NC_000017.11:3311268:G:T
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000056/2 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000017.11:g.3311269G>T, NC_000017.10:g.3214563G>T, NG_031881.1:g.170G>T, NR_024128.1:n.1025G>T, NM_001005334.1:c.959G>T

Select item 147560240414.

rs1475602404 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 17:3309509 (GRCh38)
17:3212803 (GRCh37)
Canonical SPDI:: NC_000017.11:3309508:C:G
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.3309509C>G, NC_000017.10:g.3212803C>G

Select item 147416517815.

rs1474165178 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 17:3308341 (GRCh38)
17:3211635 (GRCh37)
Canonical SPDI:: NC_000017.11:3308340:T:G
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000057/8 (GnomAD)
HGVS:: NC_000017.11:g.3308341T>G, NC_000017.10:g.3211635T>G

Select item 147336940716.

rs1473369407 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 17:3311566 (GRCh38)
17:3214860 (GRCh37)
Canonical SPDI:: NC_000017.11:3311565:A:T
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.3311566A>T, NC_000017.10:g.3214860A>T, NG_031881.1:g.467A>T

Select item 147271492317.

rs1472714923 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 17:3309612 (GRCh38)
17:3212906 (GRCh37)
Canonical SPDI:: NC_000017.11:3309611:A:G,NC_000017.11:3309611:A:T
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
G=0.000035/1 (TOMMO)
HGVS:: NC_000017.11:g.3309612A>G, NC_000017.11:g.3309612A>T, NC_000017.10:g.3212906A>G, NC_000017.10:g.3212906A>T

Select item 147263563618.

rs1472635636 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:3308994 (GRCh38)
17:3212288 (GRCh37)
Canonical SPDI:: NC_000017.11:3308993:C:T
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.3308994C>T, NC_000017.10:g.3212288C>T

Select item 147206710919.

rs1472067109 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:3310521 (GRCh38)
17:3213815 (GRCh37)
Canonical SPDI:: NC_000017.11:3310520:C:T
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.3310521C>T, NC_000017.10:g.3213815C>T, NR_024128.1:n.277C>T, NM_001005334.1:c.211C>T

Select item 147112204820.

rs1471122048 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 17:3310324 (GRCh38)
17:3213618 (GRCh37)
Canonical SPDI:: NC_000017.11:3310323:A:C
Gene:: OR3A2 (Varview), OR3A4P (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.3310324A>C, NC_000017.10:g.3213618A>C, NR_024128.1:n.80A>C, NM_001005334.1:c.14A>C

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