SNP Links for Gene (Select 400680) - SNP

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Select item 14915796771.

rs1491579677 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TCCT,TCTCTTCCT,TCTCTTCTCTTCCT,TCTCTTCTCTTCTCTTCCT,TCTCTTCTCTTCTCTTCTCTTCCT,TCTCTTCTCTTCTCTTCTCTTCTCTTCCT,TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCCT [Show Flanks]
Chromosome:: 19:21484247 (GRCh38)
19:21667050 (GRCh37)
Canonical SPDI:: NC_000019.10:21484247:CT:CTTCCT,NC_000019.10:21484247:CT:CTTCTCTTCCT,NC_000019.10:21484247:CT:CTTCTCTTCTCTTCCT,NC_000019.10:21484247:CT:CTTCTCTTCTCTTCTCTTCCT,NC_000019.10:21484247:CT:CTTCTCTTCTCTTCTCTTCTCTTCCT,NC_000019.10:21484247:CT:CTTCTCTTCTCTTCTCTTCTCTTCTCTTCCT,NC_000019.10:21484247:CT:CTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCCT
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: CTTCTCTTCTCTTCTCTTCTCTTC=0.0006/1 (Korea1K)
HGVS:: NC_000019.10:g.21484249_21484250insTCCT, NC_000019.10:g.21484249_21484250insTCTCTTCCT, NC_000019.10:g.21484248_21484249CTTCT[2]CTTCCT[1], NC_000019.10:g.21484248_21484249CTTCT[3]CTTCCT[1], NC_000019.10:g.21484248_21484249CTTCT[4]CTTCCT[1], NC_000019.10:g.21484248_21484249CTTCT[5]CTTCCT[1], NC_000019.10:g.21484248_21484249CTTCT[7]CTTCCT[1], NC_000019.9:g.21667051_21667052insTCCT, NC_000019.9:g.21667051_21667052insTCTCTTCCT, NC_000019.9:g.21667050_21667051CTTCT[2]CTTCCT[1], NC_000019.9:g.21667050_21667051CTTCT[3]CTTCCT[1], NC_000019.9:g.21667050_21667051CTTCT[4]CTTCCT[1], NC_000019.9:g.21667050_21667051CTTCT[5]CTTCCT[1], NC_000019.9:g.21667050_21667051CTTCT[7]CTTCCT[1]

Select item 14915562622.

rs1491556262 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTCT>-,CT [Show Flanks]
Chromosome:: 19:21484227 (GRCh38)
19:21667029 (GRCh37)
Canonical SPDI:: NC_000019.10:21484225:TCTCT:T,NC_000019.10:21484225:TCTCT:TCT
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000061/1 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000055/6 (GnomAD)
-=0.000382/6 (TOMMO)
-=0.000547/1 (Korea1K)
HGVS:: NC_000019.10:g.21484227_21484230del, NC_000019.10:g.21484227CT[1], NC_000019.9:g.21667029_21667032del, NC_000019.9:g.21667029CT[1]

Select item 14915557153.

rs1491555715 [Homo sapiens]

Variant type:: INS
Alleles:: ->TA,TTA,TTTG [Show Flanks]
Chromosome:: 19:21486344 (GRCh38)
19:21669147 (GRCh37)
Canonical SPDI:: NC_000019.10:21486344::TA,NC_000019.10:21486344::TTA,NC_000019.10:21486344::TTTG
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTA=0.00017/2 (ALFA)
HGVS:: NC_000019.10:g.21486344_21486345insTA, NC_000019.10:g.21486344_21486345insTTA, NC_000019.10:g.21486344_21486345insTTTG, NC_000019.9:g.21669146_21669147insTA, NC_000019.9:g.21669146_21669147insTTA, NC_000019.9:g.21669146_21669147insTTTG

Select item 14914706614.

rs1491470661 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 19:21484250 (GRCh38)
19:21667052 (GRCh37)
Canonical SPDI:: NC_000019.10:21484246:TCTCT:TCT
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TCT=0./0 (ALFA)
HGVS:: NC_000019.10:g.21484248CT[1], NC_000019.9:g.21667050CT[1]

Select item 14914341015.

rs1491434101 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 19:21484244 (GRCh38)
19:21667046 (GRCh37)
Canonical SPDI:: NC_000019.10:21484240:TCTCT:TCT
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TCT=0.00008/1 (ALFA)
HGVS:: NC_000019.10:g.21484242CT[1], NC_000019.9:g.21667044CT[1]

Select item 14914120396.

rs1491412039 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTC [Show Flanks]
Chromosome:: 19:21484226 (GRCh38)
19:21667029 (GRCh37)
Canonical SPDI:: NC_000019.10:21484226:CTC:CTCCTC
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CTCCTC=0.000084/1 (ALFA)
CTC=0.000018/2 (GnomAD)
HGVS:: NC_000019.10:g.21484227_21484229dup, NC_000019.9:g.21667029_21667031dup

Select item 14913283417.

rs1491328341 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->C
Chromosome:: no mapping
Canonical SPDI:

Select item 14912815918.

rs1491281591 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 19:21484224 (GRCh38)
19:21667026 (GRCh37)
Canonical SPDI:: NC_000019.10:21484220:TCTCT:TCT
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TCT=0./0 (ALFA)
-=0.00051/8 (TOMMO)
-=0.00055/1 (Korea1K)
HGVS:: NC_000019.10:g.21484222CT[1], NC_000019.9:g.21667024CT[1]

Select item 14912762319.

rs1491276231 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 19:21486345 (GRCh38)
19:21669147 (GRCh37)
Canonical SPDI:: NC_000019.10:21486343:TAT:T
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.00017/2 (ALFA)
HGVS:: NC_000019.10:g.21486345_21486346del, NC_000019.9:g.21669147_21669148del

Select item 149123463310.

rs1491234633 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TCTCCT [Show Flanks]
Chromosome:: 19:21484181 (GRCh38)
19:21666984 (GRCh37)
Canonical SPDI:: NC_000019.10:21484181:CT:CTTCTCCT
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CTTCTCCT=0./0 (ALFA)
HGVS:: NC_000019.10:g.21484183_21484184insTCTCCT, NC_000019.9:g.21666985_21666986insTCTCCT

Select item 149121199311.

rs1491211993 has merged into rs3081543 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTTTTTTT>-,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 19:21485186 (GRCh38)
19:21667988 (GRCh37)
Canonical SPDI:: NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:21485177:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTT=0./0 (ALFA)
HGVS:: NC_000019.10:g.21485186_21485203del, NC_000019.10:g.21485189_21485203del, NC_000019.10:g.21485190_21485203del, NC_000019.10:g.21485191_21485203del, NC_000019.10:g.21485192_21485203del, NC_000019.10:g.21485193_21485203del, NC_000019.10:g.21485194_21485203del, NC_000019.10:g.21485195_21485203del, NC_000019.10:g.21485196_21485203del, NC_000019.10:g.21485197_21485203del, NC_000019.10:g.21485198_21485203del, NC_000019.10:g.21485199_21485203del, NC_000019.10:g.21485201_21485203del, NC_000019.10:g.21485202_21485203del, NC_000019.10:g.21485203del, NC_000019.10:g.21485203dup, NC_000019.10:g.21485202_21485203dup, NC_000019.10:g.21485201_21485203dup, NC_000019.10:g.21485200_21485203dup, NC_000019.10:g.21485199_21485203dup, NC_000019.10:g.21485198_21485203dup, NC_000019.10:g.21485196_21485203dup, NC_000019.10:g.21485192_21485203dup, NC_000019.10:g.21485203_21485204insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000019.9:g.21667988_21668005del, NC_000019.9:g.21667991_21668005del, NC_000019.9:g.21667992_21668005del, NC_000019.9:g.21667993_21668005del, NC_000019.9:g.21667994_21668005del, NC_000019.9:g.21667995_21668005del, NC_000019.9:g.21667996_21668005del, NC_000019.9:g.21667997_21668005del, NC_000019.9:g.21667998_21668005del, NC_000019.9:g.21667999_21668005del, NC_000019.9:g.21668000_21668005del, NC_000019.9:g.21668001_21668005del, NC_000019.9:g.21668003_21668005del, NC_000019.9:g.21668004_21668005del, NC_000019.9:g.21668005del, NC_000019.9:g.21668005dup, NC_000019.9:g.21668004_21668005dup, NC_000019.9:g.21668003_21668005dup, NC_000019.9:g.21668002_21668005dup, NC_000019.9:g.21668001_21668005dup, NC_000019.9:g.21668000_21668005dup, NC_000019.9:g.21667998_21668005dup, NC_000019.9:g.21667994_21668005dup, NC_000019.9:g.21668005_21668006insTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 149120637012.

rs1491206370 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTC,CTCTCCTCTCCTC [Show Flanks]
Chromosome:: 19:21484221 (GRCh38)
19:21667024 (GRCh37)
Canonical SPDI:: NC_000019.10:21484221:CTC:CTCCTC,NC_000019.10:21484221:CTC:CTCCTCTCCTCTCCTC
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTCCTCTCCTCTCCTC=0./0 (ALFA)
CTC=0.00055/1 (Korea1K)
HGVS:: NC_000019.10:g.21484222_21484224dup, NC_000019.10:g.21484222_21484224CTCCT[3]C[1], NC_000019.9:g.21667024_21667026dup, NC_000019.9:g.21667024_21667026CTCCT[3]C[1]

Select item 149099686413.

rs1490996864 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:21490062 (GRCh38)
19:21672864 (GRCh37)
Canonical SPDI:: NC_000019.10:21490061:C:T
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000019.10:g.21490062C>T, NC_000019.9:g.21672864C>T

Select item 149075556214.

rs1490755562 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 19:21502100 (GRCh38)
19:21684902 (GRCh37)
Canonical SPDI:: NC_000019.10:21502099:T:A
Gene:: LINC00664 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.0002/1 (ALFA)
A=0.0002/1 (Estonian)
A=0.0005/1 (Korea1K)
A=0.014/41 (KOREAN)
HGVS:: NC_000019.10:g.21502100T>A, NC_000019.9:g.21684902T>A, NR_037194.1:n.2622T>A

Select item 149072930915.

rs1490729309 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:21500814 (GRCh38)
19:21683616 (GRCh37)
Canonical SPDI:: NC_000019.10:21500813:A:G
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.21500814A>G, NC_000019.9:g.21683616A>G

Select item 149056783516.

rs1490567835 [Homo sapiens]

Variant type:: DEL
Alleles:: GTGTGTGTGG>- [Show Flanks]
Chromosome:: 19:21499964 (GRCh38)
19:21682766 (GRCh37)
Canonical SPDI:: NC_000019.10:21499963:GTGTGTGTGG:
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000008/1 (GnomAD)
HGVS:: NC_000019.10:g.21499964_21499973del, NC_000019.9:g.21682766_21682775del

Select item 149045012417.

rs1490450124 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:21484610 (GRCh38)
19:21667412 (GRCh37)
Canonical SPDI:: NC_000019.10:21484609:C:T
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000551/9 (ALFA)
T=0.000043/6 (GnomAD)
HGVS:: NC_000019.10:g.21484610C>T, NC_000019.9:g.21667412C>T

Select item 149043404418.

rs1490434044 [Homo sapiens]

Variant type:: DEL
Alleles:: T>- [Show Flanks]
Chromosome:: 19:21498078 (GRCh38)
19:21680880 (GRCh37)
Canonical SPDI:: NC_000019.10:21498077:T:
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.21498078del, NC_000019.9:g.21680880del

Select item 149040035719.

rs1490400357 has merged into rs561780386 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT>-,CTCTT,CTCTTCTCTT,CTCTTCTCTTCTCTT,CTCTTCTCTTCTCTTCTCTT,CTCTTCTCTTCTCTTCTCTTCTCTT,CTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT [Show Flanks]
Chromosome:: 19:21484207 (GRCh38)
19:21667009 (GRCh37)
Canonical SPDI:: NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT,NC_000019.10:21484170:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT:TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT
Gene:: LINC00664 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT=0./0 (ALFA)
TCTCTTCTCTTCTCTTCTCTTCTCT=0.28714/1438 (1000Genomes)
HGVS:: NC_000019.10:g.21484172CTCTT[7], NC_000019.10:g.21484172CTCTT[8], NC_000019.10:g.21484172CTCTT[9], NC_000019.10:g.21484172CTCTT[10], NC_000019.10:g.21484172CTCTT[11], NC_000019.10:g.21484172CTCTT[12], NC_000019.10:g.21484172CTCTT[13], NC_000019.10:g.21484172CTCTT[14], NC_000019.10:g.21484172CTCTT[16], NC_000019.10:g.21484172CTCTT[17], NC_000019.10:g.21484172CTCTT[18], NC_000019.10:g.21484172CTCTT[19], NC_000019.10:g.21484172CTCTT[20], NC_000019.10:g.21484172CTCTT[21], NC_000019.10:g.21484172CTCTT[22], NC_000019.9:g.21666974CTCTT[7], NC_000019.9:g.21666974CTCTT[8], NC_000019.9:g.21666974CTCTT[9], NC_000019.9:g.21666974CTCTT[10], NC_000019.9:g.21666974CTCTT[11], NC_000019.9:g.21666974CTCTT[12], NC_000019.9:g.21666974CTCTT[13], NC_000019.9:g.21666974CTCTT[14], NC_000019.9:g.21666974CTCTT[16], NC_000019.9:g.21666974CTCTT[17], NC_000019.9:g.21666974CTCTT[18], NC_000019.9:g.21666974CTCTT[19], NC_000019.9:g.21666974CTCTT[20], NC_000019.9:g.21666974CTCTT[21], NC_000019.9:g.21666974CTCTT[22]

Select item 149026355820.

rs1490263558 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,T [Show Flanks]
Chromosome:: 19:21503066 (GRCh38)
19:21685868 (GRCh37)
Canonical SPDI:: NC_000019.10:21503065:A:C,NC_000019.10:21503065:A:T
Gene:: LINC00664 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.21503066A>C, NC_000019.10:g.21503066A>T, NC_000019.9:g.21685868A>C, NC_000019.9:g.21685868A>T, NR_037194.1:n.3588A>C, NR_037194.1:n.3588A>T

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