SNP Links for Gene (Select 400831) - SNP

Links from Gene

Items: 1 to 20 of 1556

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Select item 14908934661.

rs1490893466 [Homo sapiens]

Variant type:: SNV:
Alleles:: GAAAA>-
Chromosome:: no mapping
Canonical SPDI:

Select item 14907161582.

rs1490716158 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:1201789 (GRCh38)
20:1182433 (GRCh37)
Canonical SPDI:: NC_000020.11:1201788:A:G
Gene:: C20orf202 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.1201789A>G, NC_000020.10:g.1182433A>G

Select item 14906301623.

rs1490630162 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:1204355 (GRCh38)
20:1184999 (GRCh37)
Canonical SPDI:: NC_000020.11:1204354:G:A
Gene:: C20orf202 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000020.11:g.1204355G>A, NC_000020.10:g.1184999G>A

Select item 14905634084.

rs1490563408 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:1203328 (GRCh38)
20:1183972 (GRCh37)
Canonical SPDI:: NC_000020.11:1203327:G:A
Gene:: C20orf202 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.1203328G>A, NC_000020.10:g.1183972G>A

Select item 14898097705.

rs1489809770 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:1204846 (GRCh38)
20:1185490 (GRCh37)
Canonical SPDI:: NC_000020.11:1204845:G:A
Gene:: C20orf202 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000020.11:g.1204846G>A, NC_000020.10:g.1185490G>A

Select item 14894692096.

rs1489469209 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 20:1203330 (GRCh38)
20:1183974 (GRCh37)
Canonical SPDI:: NC_000020.11:1203329:C:A,NC_000020.11:1203329:C:T
Gene:: C20orf202 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
A=0.000071/1 (TOMMO)
T=0.000156/1 (1000Genomes)
A=0.000546/1 (Korea1K)
A=0.001027/3 (KOREAN)
HGVS:: NC_000020.11:g.1203330C>A, NC_000020.11:g.1203330C>T, NC_000020.10:g.1183974C>A, NC_000020.10:g.1183974C>T

Select item 14892410027.

rs1489241002 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 20:1206858 (GRCh38)
20:1187502 (GRCh37)
Canonical SPDI:: NC_000020.11:1206857:C:G
Gene:: C20orf202 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000007/1 (GnomAD_exomes)
G=0.000008/2 (TOPMED)
HGVS:: NC_000020.11:g.1206858C>G, NC_000020.10:g.1187502C>G

Select item 14887292348.

rs1488729234 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:1205891 (GRCh38)
20:1186535 (GRCh37)
Canonical SPDI:: NC_000020.11:1205890:G:A
Gene:: C20orf202 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000142/2 (ALFA)
A=0.000021/3 (GnomAD)
A=0.000026/7 (TOPMED)
HGVS:: NC_000020.11:g.1205891G>A, NC_000020.10:g.1186535G>A

Select item 14880639789.

rs1488063978 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 20:1202263 (GRCh38)
20:1182907 (GRCh37)
Canonical SPDI:: NC_000020.11:1202262:C:G,NC_000020.11:1202262:C:T
Gene:: C20orf202 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.1202263C>G, NC_000020.11:g.1202263C>T, NC_000020.10:g.1182907C>G, NC_000020.10:g.1182907C>T

Select item 148742575610.

rs1487425756 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 20:1205779 (GRCh38)
20:1186423 (GRCh37)
Canonical SPDI:: NC_000020.11:1205778:A:C
Gene:: C20orf202 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000026/7 (TOPMED)
HGVS:: NC_000020.11:g.1205779A>C, NC_000020.10:g.1186423A>C

Select item 148730398711.

rs1487303987 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 20:1202622 (GRCh38)
20:1183266 (GRCh37)
Canonical SPDI:: NC_000020.11:1202621:A:C
Gene:: C20orf202 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.1202622A>C, NC_000020.10:g.1183266A>C

Select item 148660521012.

rs1486605210 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:1206727 (GRCh38)
20:1187371 (GRCh37)
Canonical SPDI:: NC_000020.11:1206726:T:C
Gene:: C20orf202 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.1206727T>C, NC_000020.10:g.1187371T>C

Select item 148638012013.

rs1486380120 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 20:1208309 (GRCh38)
20:1188953 (GRCh37)
Canonical SPDI:: NC_000020.11:1208308:G:T
Gene:: C20orf202 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00003/8 (TOPMED)
T=0.000036/5 (GnomAD)
HGVS:: NC_000020.11:g.1208309G>T, NC_000020.10:g.1188953G>T, NM_001394958.1:c.*1207G>T

Select item 148599642014.

rs1485996420 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:1207798 (GRCh38)
20:1188442 (GRCh37)
Canonical SPDI:: NC_000020.11:1207797:T:C
Gene:: C20orf202 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000020.11:g.1207798T>C, NC_000020.10:g.1188442T>C, NM_001009612.3:c.*696T>C, NM_001009612.2:c.*696T>C, NM_001394958.1:c.*696T>C

Select item 148580871115.

rs1485808711 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 20:1206764 (GRCh38)
20:1187408 (GRCh37)
Canonical SPDI:: NC_000020.11:1206763:G:A,NC_000020.11:1206763:G:T
Gene:: C20orf202 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.1206764G>A, NC_000020.11:g.1206764G>T, NC_000020.10:g.1187408G>A, NC_000020.10:g.1187408G>T

Select item 148574325116.

rs1485743251 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:1204445 (GRCh38)
20:1185089 (GRCh37)
Canonical SPDI:: NC_000020.11:1204444:C:T
Gene:: C20orf202 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.1204445C>T, NC_000020.10:g.1185089C>T

Select item 148560965317.

rs1485609653 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:1206967 (GRCh38)
20:1187611 (GRCh37)
Canonical SPDI:: NC_000020.11:1206966:C:T
Gene:: C20orf202 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00034/1 (KOREAN)
HGVS:: NC_000020.11:g.1206967C>T, NC_000020.10:g.1187611C>T, NM_001009612.3:c.234C>T, NM_001009612.2:c.234C>T, NM_001394958.1:c.165C>T

Select item 148448111018.

rs1484481110 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:1201469 (GRCh38)
20:1182113 (GRCh37)
Canonical SPDI:: NC_000020.11:1201468:T:C
Gene:: C20orf202 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.1201469T>C, NC_000020.10:g.1182113T>C

Select item 148447408019.

rs1484474080 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:1204701 (GRCh38)
20:1185345 (GRCh37)
Canonical SPDI:: NC_000020.11:1204700:T:C
Gene:: C20orf202 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000020.11:g.1204701T>C, NC_000020.10:g.1185345T>C

Select item 148402296720.

rs1484022967 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 20:1202708 (GRCh38)
20:1183352 (GRCh37)
Canonical SPDI:: NC_000020.11:1202707:G:A,NC_000020.11:1202707:G:T
Gene:: C20orf202 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.00005/7 (GnomAD)
HGVS:: NC_000020.11:g.1202708G>A, NC_000020.11:g.1202708G>T, NC_000020.10:g.1183352G>A, NC_000020.10:g.1183352G>T

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