SNP Links for Gene (Select 400961) - SNP

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Select item 14915456281.

rs1491545628 has merged into rs11376681 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAA>-,A,AA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAAAA [Show Flanks]
Chromosome:: 2:71211617 (GRCh38)
2:71438747 (GRCh37)
Canonical SPDI:: NC_000002.12:71211602:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000002.12:71211602:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000002.12:71211602:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000002.12:71211602:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000002.12:71211602:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000002.12:71211602:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000002.12:71211602:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000002.12:71211602:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAA=0./0 (ALFA)
A=0.3093/1549 (1000Genomes)
HGVS:: NC_000002.12:g.71211617_71211619del, NC_000002.12:g.71211618_71211619del, NC_000002.12:g.71211619del, NC_000002.12:g.71211619dup, NC_000002.12:g.71211618_71211619dup, NC_000002.12:g.71211617_71211619dup, NC_000002.12:g.71211616_71211619dup, NC_000002.12:g.71211612_71211619dup, NC_000002.11:g.71438747_71438749del, NC_000002.11:g.71438748_71438749del, NC_000002.11:g.71438749del, NC_000002.11:g.71438749dup, NC_000002.11:g.71438748_71438749dup, NC_000002.11:g.71438747_71438749dup, NC_000002.11:g.71438746_71438749dup, NC_000002.11:g.71438742_71438749dup

Select item 14915380322.

rs1491538032 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 2:71189005 (GRCh38)
2:71416136 (GRCh37)
Canonical SPDI:: NC_000002.12:71189005::G
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000002.12:g.71189005_71189006insG, NC_000002.11:g.71416135_71416136insG

Select item 14915260263.

rs1491526026 [Homo sapiens]

Variant type:: INS
Alleles:: ->T,TTTTTTTTTTT [Show Flanks]
Chromosome:: 2:71192261 (GRCh38)
2:71419392 (GRCh37)
Canonical SPDI:: NC_000002.12:71192261::T,NC_000002.12:71192261::TTTTTTTTTTT
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTT=0.000061/1 (ALFA)
T=0.000617/63 (GnomAD)
HGVS:: NC_000002.12:g.71192261_71192262insT, NC_000002.12:g.71192261_71192262insTTTTTTTTTTT, NC_000002.11:g.71419391_71419392insT, NC_000002.11:g.71419391_71419392insTTTTTTTTTTT

Select item 14914423204.

rs1491442320 [Homo sapiens]

Variant type:: DELINS
Alleles:: GG>-,G [Show Flanks]
Chromosome:: 2:71201008 (GRCh38)
2:71428138 (GRCh37)
Canonical SPDI:: NC_000002.12:71201006:GGG:G,NC_000002.12:71201006:GGG:GG
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.02386/283 (ALFA)
-=0.03425/15 (NorthernSweden)
-=0.05/2 (GENOME_DK)
HGVS:: NC_000002.12:g.71201008_71201009del, NC_000002.12:g.71201009del, NC_000002.11:g.71428138_71428139del, NC_000002.11:g.71428139del

Select item 14914313855.

rs1491431385 has merged into rs56008115 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTT>-,TT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 2:71189017 (GRCh38)
2:71416147 (GRCh37)
Canonical SPDI:: NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:71189004:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000002.12:g.71189017_71189025del, NC_000002.12:g.71189019_71189025del, NC_000002.12:g.71189022_71189025del, NC_000002.12:g.71189023_71189025del, NC_000002.12:g.71189024_71189025del, NC_000002.12:g.71189025del, NC_000002.12:g.71189025dup, NC_000002.12:g.71189024_71189025dup, NC_000002.12:g.71189023_71189025dup, NC_000002.12:g.71189022_71189025dup, NC_000002.12:g.71189021_71189025dup, NC_000002.12:g.71189020_71189025dup, NC_000002.12:g.71189019_71189025dup, NC_000002.12:g.71189025_71189026insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000002.11:g.71416147_71416155del, NC_000002.11:g.71416149_71416155del, NC_000002.11:g.71416152_71416155del, NC_000002.11:g.71416153_71416155del, NC_000002.11:g.71416154_71416155del, NC_000002.11:g.71416155del, NC_000002.11:g.71416155dup, NC_000002.11:g.71416154_71416155dup, NC_000002.11:g.71416153_71416155dup, NC_000002.11:g.71416152_71416155dup, NC_000002.11:g.71416151_71416155dup, NC_000002.11:g.71416150_71416155dup, NC_000002.11:g.71416149_71416155dup, NC_000002.11:g.71416155_71416156insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 14913841686.

rs1491384168 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 2:71192261 (GRCh38)
2:71419391 (GRCh37)
Canonical SPDI:: NC_000002.12:71192260:CA:
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000002.12:g.71192261_71192262del, NC_000002.11:g.71419391_71419392del

Select item 14913489537.

rs1491348953 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 2:71192263 (GRCh38)
2:71419394 (GRCh37)
Canonical SPDI:: NC_000002.12:71192263::C
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
HGVS:: NC_000002.12:g.71192263_71192264insC, NC_000002.11:g.71419393_71419394insC

Select item 14913399318.

rs1491339931 has merged into rs56380844 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTT>-,T,TT,TTT,TTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT [Show Flanks]
Chromosome:: 2:71192275 (GRCh38)
2:71419405 (GRCh37)
Canonical SPDI:: NC_000002.12:71192262:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000002.12:71192262:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000002.12:71192262:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000002.12:71192262:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000002.12:71192262:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000002.12:71192262:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000002.12:71192262:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000002.12:71192262:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000002.12:71192262:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTT=0./0 (ALFA)
-=0.2416/1210 (1000Genomes)
HGVS:: NC_000002.12:g.71192275_71192279del, NC_000002.12:g.71192276_71192279del, NC_000002.12:g.71192277_71192279del, NC_000002.12:g.71192278_71192279del, NC_000002.12:g.71192279del, NC_000002.12:g.71192279dup, NC_000002.12:g.71192278_71192279dup, NC_000002.12:g.71192277_71192279dup, NC_000002.12:g.71192276_71192279dup, NC_000002.11:g.71419405_71419409del, NC_000002.11:g.71419406_71419409del, NC_000002.11:g.71419407_71419409del, NC_000002.11:g.71419408_71419409del, NC_000002.11:g.71419409del, NC_000002.11:g.71419409dup, NC_000002.11:g.71419408_71419409dup, NC_000002.11:g.71419407_71419409dup, NC_000002.11:g.71419406_71419409dup

Select item 14911502089.

rs1491150208 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 2:71192262 (GRCh38)
2:71419392 (GRCh37)
Canonical SPDI:: NC_000002.12:71192261:AT:
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000002.12:g.71192262_71192263del, NC_000002.11:g.71419392_71419393del

Select item 149112041310.

rs1491120413 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TGGG,TGTGTGTGGG [Show Flanks]
Chromosome:: 2:71194492 (GRCh38)
2:71421623 (GRCh37)
Canonical SPDI:: NC_000002.12:71194492:G:GTGGG,NC_000002.12:71194492:G:GTGTGTGTGGG
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GTGTGTGTGGG=0./0 (ALFA)
GTGTGTGTGG=0.000004/1 (TOPMED)
GTGG=0.00004/5 (GnomAD)
GTGG=0.00118/20 (TOMMO)
HGVS:: NC_000002.12:g.71194493_71194494insTGGG, NC_000002.12:g.71194493GT[4]GGG[1], NC_000002.11:g.71421623_71421624insTGGG, NC_000002.11:g.71421623GT[4]GGG[1]

Select item 149100837911.

rs1491008379 has merged into rs375101568 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTT>-,T,TT,TTTT,TTTTT,TTTTTTTTTTTT [Show Flanks]
Chromosome:: 2:71201399 (GRCh38)
2:71428529 (GRCh37)
Canonical SPDI:: NC_000002.12:71201386:TTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000002.12:71201386:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000002.12:71201386:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000002.12:71201386:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000002.12:71201386:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000002.12:71201386:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.172422/724 (1000Genomes)
HGVS:: NC_000002.12:g.71201399_71201401del, NC_000002.12:g.71201400_71201401del, NC_000002.12:g.71201401del, NC_000002.12:g.71201401dup, NC_000002.12:g.71201400_71201401dup, NC_000002.12:g.71201393_71201401dup, NC_000002.11:g.71428529_71428531del, NC_000002.11:g.71428530_71428531del, NC_000002.11:g.71428531del, NC_000002.11:g.71428531dup, NC_000002.11:g.71428530_71428531dup, NC_000002.11:g.71428523_71428531dup

Select item 149093777112.

rs1490937771 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:71224431 (GRCh38)
2:71451561 (GRCh37)
Canonical SPDI:: NC_000002.12:71224430:G:A
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.71224431G>A, NC_000002.11:g.71451561G>A

Select item 149080811213.

rs1490808112 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:71206644 (GRCh38)
2:71433774 (GRCh37)
Canonical SPDI:: NC_000002.12:71206643:T:C
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000002.12:g.71206644T>C, NC_000002.11:g.71433774T>C

Select item 149080422414.

rs1490804224 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 2:71198850 (GRCh38)
2:71425981 (GRCh37)
Canonical SPDI:: NC_000002.12:71198850:TTTTTTT:TTTTTTTT
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.71198857dup, NC_000002.11:g.71425987dup

Select item 149079351815.

rs1490793518 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 2:71198258 (GRCh38)
2:71425388 (GRCh37)
Canonical SPDI:: NC_000002.12:71198257:A:T
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.01095/32 (KOREAN)
HGVS:: NC_000002.12:g.71198258A>T, NC_000002.11:g.71425388A>T

Select item 149078385016.

rs1490783850 [Homo sapiens]

Variant type:: SNV:
Alleles:: C>T
Chromosome:: no mapping
Canonical SPDI:

Select item 149071653817.

rs1490716538 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 2:71215632 (GRCh38)
2:71442762 (GRCh37)
Canonical SPDI:: NC_000002.12:71215631:A:C
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.71215632A>C, NC_000002.11:g.71442762A>C

Select item 149062637518.

rs1490626375 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 2:71197810 (GRCh38)
2:71424940 (GRCh37)
Canonical SPDI:: NC_000002.12:71197809:CC:C
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
-=0.000011/3 (TOPMED)
HGVS:: NC_000002.12:g.71197811del, NC_000002.11:g.71424941del

Select item 149061951519.

rs1490619515 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 2:71205559 (GRCh38)
2:71432689 (GRCh37)
Canonical SPDI:: NC_000002.12:71205558:C:A
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000019/5 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000002.12:g.71205559C>A, NC_000002.11:g.71432689C>A

Select item 149060307320.

rs1490603073 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:71213724 (GRCh38)
2:71440854 (GRCh37)
Canonical SPDI:: NC_000002.12:71213723:A:G
Gene:: PAIP2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.71213724A>G, NC_000002.11:g.71440854A>G

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