Links from Gene
Items: 1 to 20 of 15087
1.
rs1491580573 has merged into rs560720648 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA
[Show Flanks]
- Chromosome:
- 2:86939588
(GRCh38)
2:87166711
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86939578:AAAAAAAAAAAAAAA:AAAAAAAAA,NC_000002.12:86939578:AAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000002.12:86939578:AAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000002.12:86939578:AAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000002.12:86939578:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000002.12:86939578:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000002.12:86939578:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000002.12:86939578:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000002.12:86939578:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000002.12:86939578:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAA=0./0
(
ALFA)
-=0.01997/100
(1000Genomes)
- HGVS:
NC_000002.12:g.86939588_86939593del, NC_000002.12:g.86939589_86939593del, NC_000002.12:g.86939590_86939593del, NC_000002.12:g.86939591_86939593del, NC_000002.12:g.86939592_86939593del, NC_000002.12:g.86939593del, NC_000002.12:g.86939593dup, NC_000002.12:g.86939592_86939593dup, NC_000002.12:g.86939591_86939593dup, NC_000002.12:g.86939590_86939593dup, NC_000002.11:g.87166711_87166716del, NC_000002.11:g.87166712_87166716del, NC_000002.11:g.87166713_87166716del, NC_000002.11:g.87166714_87166716del, NC_000002.11:g.87166715_87166716del, NC_000002.11:g.87166716del, NC_000002.11:g.87166716dup, NC_000002.11:g.87166715_87166716dup, NC_000002.11:g.87166714_87166716dup, NC_000002.11:g.87166713_87166716dup
2.
rs1491554125 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 2:86962507
(GRCh38)
2:87189630
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86962506:CA:
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.00003/1
(GnomAD)
- HGVS:
4.
rs1491546500 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 2:86939593
(GRCh38)
2:87166717
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86939593:G:GG
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GG=0./0
(
ALFA)
G=0.000029/3
(GnomAD)
- HGVS:
5.
rs1491545782 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GGCCGC,GGCGGCGGCCGC
[Show Flanks]
- Chromosome:
- 2:86914571
(GRCh38)
2:87141695
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86914571:GC:GCGGCCGC,NC_000002.12:86914571:GC:GCGGCGGCGGCCGC
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
GCGGCGGCGGCCGC=0./0
(
ALFA)
- HGVS:
6.
rs1491527768 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 2:86939578
(GRCh38)
2:87166701
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86939577:CA:
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.00001/1
(GnomAD)
- HGVS:
8.
rs1491468443 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 2:86943189
(GRCh38)
2:87170313
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86943189:GGGG:GGGGG
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GGGGG=0./0
(
ALFA)
G=0.000014/2
(GnomAD)
G=0.000015/4
(TOPMED)
- HGVS:
11.
rs1491421138 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->AT
[Show Flanks]
- Chromosome:
- 2:86918454
(GRCh38)
2:87145578
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86918454:T:TAT
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
TAT=0./0
(
ALFA)
TA=0.00011/4
(GnomAD)
- HGVS:
12.
rs1491385316 has merged into rs61486857 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 2:86962521
(GRCh38)
2:87189644
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:86962507:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAAA=0./0
(
ALFA)
- HGVS:
NC_000002.12:g.86962521_86962533del, NC_000002.12:g.86962523_86962533del, NC_000002.12:g.86962524_86962533del, NC_000002.12:g.86962525_86962533del, NC_000002.12:g.86962526_86962533del, NC_000002.12:g.86962527_86962533del, NC_000002.12:g.86962528_86962533del, NC_000002.12:g.86962529_86962533del, NC_000002.12:g.86962530_86962533del, NC_000002.12:g.86962531_86962533del, NC_000002.12:g.86962532_86962533del, NC_000002.12:g.86962533del, NC_000002.12:g.86962533dup, NC_000002.12:g.86962532_86962533dup, NC_000002.12:g.86962530_86962533dup, NC_000002.12:g.86962529_86962533dup, NC_000002.11:g.87189644_87189656del, NC_000002.11:g.87189646_87189656del, NC_000002.11:g.87189647_87189656del, NC_000002.11:g.87189648_87189656del, NC_000002.11:g.87189649_87189656del, NC_000002.11:g.87189650_87189656del, NC_000002.11:g.87189651_87189656del, NC_000002.11:g.87189652_87189656del, NC_000002.11:g.87189653_87189656del, NC_000002.11:g.87189654_87189656del, NC_000002.11:g.87189655_87189656del, NC_000002.11:g.87189656del, NC_000002.11:g.87189656dup, NC_000002.11:g.87189655_87189656dup, NC_000002.11:g.87189653_87189656dup, NC_000002.11:g.87189652_87189656dup
13.
rs1491283481 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 2:86951870
(GRCh38)
2:87178994
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86951870:GGG:GGGG
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GGGG=0./0
(
ALFA)
G=0.0001/3
(GnomAD)
G=0.00177/23
(TOMMO)
G=0.00188/3
(Korea1K)
- HGVS:
14.
rs1491275797 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TA>-
[Show Flanks]
- Chromosome:
- 2:86929716
(GRCh38)
2:87156839
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86929715:TA:
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.004552/54
(
ALFA)
-=0.004787/526
(GnomAD)
- HGVS:
15.
rs1491268996 has merged into rs1204179315 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TT>-,T,TTT
[Show Flanks]
- Chromosome:
- 2:86936021
(GRCh38)
2:87163144
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86936010:TTTTTTTTTTTT:TTTTTTTTTT,NC_000002.12:86936010:TTTTTTTTTTTT:TTTTTTTTTTT,NC_000002.12:86936010:TTTTTTTTTTTT:TTTTTTTTTTTTT
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTT=0.00068/8
(
ALFA)
- HGVS:
17.
rs1491252121 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 2:87013427
(GRCh38)
2:87240551
(GRCh37)
- Canonical SPDI:
- NC_000002.12:87013427:GGGGGG:GGGGGGG
- Gene:
- PLGLB1 (Varview), RGPD1 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant,3_prime_UTR_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GGGGGGG=0./0
(
ALFA)
G=0./0
(GnomAD)
G=0.000008/2
(TOPMED)
- HGVS:
18.
rs1491238675 has merged into rs1160123598 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 2:86918465
(GRCh38)
2:87145588
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000002.12:86918453:TTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTT=0./0
(
ALFA)
-=0.000072/19
(TOPMED)
- HGVS:
NC_000002.12:g.86918465_86918477del, NC_000002.12:g.86918466_86918477del, NC_000002.12:g.86918467_86918477del, NC_000002.12:g.86918468_86918477del, NC_000002.12:g.86918469_86918477del, NC_000002.12:g.86918470_86918477del, NC_000002.12:g.86918471_86918477del, NC_000002.12:g.86918472_86918477del, NC_000002.12:g.86918473_86918477del, NC_000002.12:g.86918474_86918477del, NC_000002.12:g.86918475_86918477del, NC_000002.12:g.86918476_86918477del, NC_000002.12:g.86918477del, NC_000002.12:g.86918477dup, NC_000002.12:g.86918476_86918477dup, NC_000002.12:g.86918475_86918477dup, NC_000002.12:g.86918474_86918477dup, NC_000002.12:g.86918473_86918477dup, NC_000002.12:g.86918472_86918477dup, NC_000002.12:g.86918471_86918477dup, NC_000002.12:g.86918470_86918477dup, NC_000002.12:g.86918477_86918478insTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000002.12:g.86918477_86918478insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000002.11:g.87145588_87145600del, NC_000002.11:g.87145589_87145600del, NC_000002.11:g.87145590_87145600del, NC_000002.11:g.87145591_87145600del, NC_000002.11:g.87145592_87145600del, NC_000002.11:g.87145593_87145600del, NC_000002.11:g.87145594_87145600del, NC_000002.11:g.87145595_87145600del, NC_000002.11:g.87145596_87145600del, NC_000002.11:g.87145597_87145600del, NC_000002.11:g.87145598_87145600del, NC_000002.11:g.87145599_87145600del, NC_000002.11:g.87145600del, NC_000002.11:g.87145600dup, NC_000002.11:g.87145599_87145600dup, NC_000002.11:g.87145598_87145600dup, NC_000002.11:g.87145597_87145600dup, NC_000002.11:g.87145596_87145600dup, NC_000002.11:g.87145595_87145600dup, NC_000002.11:g.87145594_87145600dup, NC_000002.11:g.87145593_87145600dup, NC_000002.11:g.87145600_87145601insTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000002.11:g.87145600_87145601insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
19.
rs1491200908 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->A
[Show Flanks]
- Chromosome:
- 2:86929716
(GRCh38)
2:87156840
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86929716:A:AA
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
AA=0./0
(
ALFA)
A=0.000048/5
(GnomAD)
- HGVS:
20.
rs1491003213 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 2:86920427
(GRCh38)
2:87147550
(GRCh37)
- Canonical SPDI:
- NC_000002.12:86920426:C:T
- Gene:
- RGPD1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
- HGVS: