Links from Gene
Items: 1 to 20 of 1000
1.
rs1491580991 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AA>-
[Show Flanks]
- Chromosome:
- 2:185816942
(GRCh38)
2:186681669
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185816941:AA:
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.000075/10
(GnomAD)
- HGVS:
2.
rs1491565530 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CGTGTG
[Show Flanks]
- Chromosome:
- 2:185751462
(GRCh38)
2:186616190
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185751462:GTGTG:GTGTGCGTGTG
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GTGTGCGTGTG=0./0
(
ALFA)
GTGTGC=0.00043/1
(GnomAD)
- HGVS:
4.
rs1491473516 has merged into rs10567134 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 2:185777406
(GRCh38)
2:186642133
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185777393:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000002.12:185777393:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000002.12:185777393:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000002.12:185777393:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000002.12:185777393:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000002.12:185777393:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000002.12:185777393:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000002.12:185777393:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000002.12:185777393:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTT=0./0
(
ALFA)
- HGVS:
NC_000002.12:g.185777406_185777411del, NC_000002.12:g.185777407_185777411del, NC_000002.12:g.185777408_185777411del, NC_000002.12:g.185777409_185777411del, NC_000002.12:g.185777410_185777411del, NC_000002.12:g.185777411del, NC_000002.12:g.185777411dup, NC_000002.12:g.185777410_185777411dup, NC_000002.12:g.185777407_185777411dup, NC_000002.11:g.186642133_186642138del, NC_000002.11:g.186642134_186642138del, NC_000002.11:g.186642135_186642138del, NC_000002.11:g.186642136_186642138del, NC_000002.11:g.186642137_186642138del, NC_000002.11:g.186642138del, NC_000002.11:g.186642138dup, NC_000002.11:g.186642137_186642138dup, NC_000002.11:g.186642134_186642138dup, NG_051365.1:g.43512_43517del, NG_051365.1:g.43513_43517del, NG_051365.1:g.43514_43517del, NG_051365.1:g.43515_43517del, NG_051365.1:g.43516_43517del, NG_051365.1:g.43517del, NG_051365.1:g.43517dup, NG_051365.1:g.43516_43517dup, NG_051365.1:g.43513_43517dup
5.
rs1491229101 has merged into rs199815434 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TT>-,T,TTT,TTTT,TTTTT
[Show Flanks]
- Chromosome:
- 2:185781854
(GRCh38)
2:186646581
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185781843:TTTTTTTTTTTT:TTTTTTTTTT,NC_000002.12:185781843:TTTTTTTTTTTT:TTTTTTTTTTT,NC_000002.12:185781843:TTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000002.12:185781843:TTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000002.12:185781843:TTTTTTTTTTTT:TTTTTTTTTTTTTTT
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTT=0./0
(
ALFA)
-=0.4693/275
(NorthernSweden)
T=0.475/19
(GENOME_DK)
-=0.4779/1772
(TWINSUK)
-=0.4857/1872
(ALSPAC)
T=0.4956/2482
(1000Genomes)
- HGVS:
NC_000002.12:g.185781854_185781855del, NC_000002.12:g.185781855del, NC_000002.12:g.185781855dup, NC_000002.12:g.185781854_185781855dup, NC_000002.12:g.185781853_185781855dup, NC_000002.11:g.186646581_186646582del, NC_000002.11:g.186646582del, NC_000002.11:g.186646582dup, NC_000002.11:g.186646581_186646582dup, NC_000002.11:g.186646580_186646582dup, NG_051365.1:g.47960_47961del, NG_051365.1:g.47961del, NG_051365.1:g.47961dup, NG_051365.1:g.47960_47961dup, NG_051365.1:g.47959_47961dup
6.
rs1491219404 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 2:185816942
(GRCh38)
2:186681670
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185816942::G
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
8.
rs1491090540 has merged into rs56395901 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TGTGTGTGTGTGTGTGTGTGTGTG>-,TGTGTGTG,TGTGTGTGTG,TGTGTGTGTGTG,TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
[Show Flanks]
- Chromosome:
- 2:185751476
(GRCh38)
2:186616203
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000002.12:185751461:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TGTGTGTGTGTGTG=0./0
(
ALFA)
- HGVS:
NC_000002.12:g.185751462TG[7], NC_000002.12:g.185751462TG[11], NC_000002.12:g.185751462TG[12], NC_000002.12:g.185751462TG[13], NC_000002.12:g.185751462TG[14], NC_000002.12:g.185751462TG[15], NC_000002.12:g.185751462TG[16], NC_000002.12:g.185751462TG[17], NC_000002.12:g.185751462TG[18], NC_000002.12:g.185751462TG[20], NC_000002.12:g.185751462TG[21], NC_000002.12:g.185751462TG[22], NC_000002.12:g.185751462TG[23], NC_000002.12:g.185751462TG[24], NC_000002.12:g.185751462TG[25], NC_000002.12:g.185751462TG[26], NC_000002.12:g.185751462TG[27], NC_000002.12:g.185751462TG[28], NC_000002.12:g.185751462TG[29], NC_000002.12:g.185751462TG[37], NC_000002.11:g.186616189TG[7], NC_000002.11:g.186616189TG[11], NC_000002.11:g.186616189TG[12], NC_000002.11:g.186616189TG[13], NC_000002.11:g.186616189TG[14], NC_000002.11:g.186616189TG[15], NC_000002.11:g.186616189TG[16], NC_000002.11:g.186616189TG[17], NC_000002.11:g.186616189TG[18], NC_000002.11:g.186616189TG[20], NC_000002.11:g.186616189TG[21], NC_000002.11:g.186616189TG[22], NC_000002.11:g.186616189TG[23], NC_000002.11:g.186616189TG[24], NC_000002.11:g.186616189TG[25], NC_000002.11:g.186616189TG[26], NC_000002.11:g.186616189TG[27], NC_000002.11:g.186616189TG[28], NC_000002.11:g.186616189TG[29], NC_000002.11:g.186616189TG[37], NG_051365.1:g.17568TG[7], NG_051365.1:g.17568TG[11], NG_051365.1:g.17568TG[12], NG_051365.1:g.17568TG[13], NG_051365.1:g.17568TG[14], NG_051365.1:g.17568TG[15], NG_051365.1:g.17568TG[16], NG_051365.1:g.17568TG[17], NG_051365.1:g.17568TG[18], NG_051365.1:g.17568TG[20], NG_051365.1:g.17568TG[21], NG_051365.1:g.17568TG[22], NG_051365.1:g.17568TG[23], NG_051365.1:g.17568TG[24], NG_051365.1:g.17568TG[25], NG_051365.1:g.17568TG[26], NG_051365.1:g.17568TG[27], NG_051365.1:g.17568TG[28], NG_051365.1:g.17568TG[29], NG_051365.1:g.17568TG[37]
9.
rs1490985034 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 2:185779182
(GRCh38)
2:186643909
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185779181:T:G
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
G=0.000106/2
(TOMMO)
- HGVS:
10.
rs1490979675 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 2:185795171
(GRCh38)
2:186659898
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185795170:A:G
- Gene:
- FSIP2 (Varview), FSIP2-AS1 (Varview)
- Functional Consequence:
- intron_variant,missense_variant,coding_sequence_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000011/3
(TOPMED)
G=0.000014/2
(GnomAD)
G=0.000154/21
(GnomAD_exomes)
- HGVS:
NC_000002.12:g.185795171A>G, NC_000002.11:g.186659898A>G, NG_051365.1:g.61277A>G, NM_173651.4:c.8035A>G, NM_173651.3:c.8035A>G, NM_173651.2:c.8302A>G, XM_047444329.1:c.8041A>G, XM_047444333.1:c.7435A>G, XM_047444331.1:c.8041A>G, XM_047444335.1:c.8041A>G, XM_047444336.1:c.8041A>G, NP_775922.3:p.Lys2679Glu, XP_047300285.1:p.Lys2681Glu, XP_047300289.1:p.Lys2479Glu, XP_047300287.1:p.Lys2681Glu, XP_047300291.1:p.Lys2681Glu, XP_047300292.1:p.Lys2681Glu
11.
rs1490957581 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 2:185778301
(GRCh38)
2:186643028
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185778300:T:C
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
12.
rs1490945286 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 2:185744885
(GRCh38)
2:186609612
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185744884:T:C
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
13.
rs1490941664 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 2:185765352
(GRCh38)
2:186630079
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185765351:T:C
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000019/5
(TOPMED)
- HGVS:
14.
rs1490911873 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 2:185813025
(GRCh38)
2:186677752
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185813024:G:A
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
15.
rs1490841934 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,T
[Show Flanks]
- Chromosome:
- 2:185795084
(GRCh38)
2:186659811
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185795083:G:A,NC_000002.12:185795083:G:T
- Gene:
- FSIP2 (Varview), FSIP2-AS1 (Varview)
- Functional Consequence:
- intron_variant,missense_variant,coding_sequence_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
- HGVS:
NC_000002.12:g.185795084G>A, NC_000002.12:g.185795084G>T, NC_000002.11:g.186659811G>A, NC_000002.11:g.186659811G>T, NG_051365.1:g.61190G>A, NG_051365.1:g.61190G>T, NM_173651.4:c.7948G>A, NM_173651.4:c.7948G>T, NM_173651.3:c.7948G>A, NM_173651.3:c.7948G>T, NM_173651.2:c.8215G>A, NM_173651.2:c.8215G>T, XM_047444329.1:c.7954G>A, XM_047444329.1:c.7954G>T, XM_047444333.1:c.7348G>A, XM_047444333.1:c.7348G>T, XM_047444331.1:c.7954G>A, XM_047444331.1:c.7954G>T, XM_047444335.1:c.7954G>A, XM_047444335.1:c.7954G>T, XM_047444336.1:c.7954G>A, XM_047444336.1:c.7954G>T, NP_775922.3:p.Val2650Met, NP_775922.3:p.Val2650Leu, XP_047300285.1:p.Val2652Met, XP_047300285.1:p.Val2652Leu, XP_047300289.1:p.Val2450Met, XP_047300289.1:p.Val2450Leu, XP_047300287.1:p.Val2652Met, XP_047300287.1:p.Val2652Leu, XP_047300291.1:p.Val2652Met, XP_047300291.1:p.Val2652Leu, XP_047300292.1:p.Val2652Met, XP_047300292.1:p.Val2652Leu
18.
rs1490681000 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AC>-
[Show Flanks]
- Chromosome:
- 2:185822583
(GRCh38)
2:186687310
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185822580:ACAC:AC
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACAC=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.000007/1
(GnomAD)
- HGVS:
19.
rs1490629387 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 2:185804602
(GRCh38)
2:186669329
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185804601:T:G
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant,missense_variant,coding_sequence_variant
- Validated:
- by frequency
- MAF:
G=0.000007/1
(GnomAD_exomes)
- HGVS:
NC_000002.12:g.185804602T>G, NC_000002.11:g.186669329T>G, NG_051365.1:g.70708T>G, NM_173651.4:c.15296T>G, NM_173651.3:c.15296T>G, NM_173651.2:c.15563T>G, XM_047444329.1:c.15302T>G, XM_047444333.1:c.14696T>G, XM_047444331.1:c.14579T>G, XM_047444335.1:c.15302T>G, NP_775922.3:p.Ile5099Ser, XP_047300285.1:p.Ile5101Ser, XP_047300289.1:p.Ile4899Ser, XP_047300287.1:p.Ile4860Ser, XP_047300291.1:p.Ile5101Ser
20.
rs1490572598 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 2:185746011
(GRCh38)
2:186610738
(GRCh37)
- Canonical SPDI:
- NC_000002.12:185746010:A:C
- Gene:
- FSIP2 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000007/1
(GnomAD)
- HGVS: