SNP Links for Gene (Select 406908) - SNP

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Select item 14901380571.

rs1490138057 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:64378645 (GRCh38)
8:65291202 (GRCh37)
Canonical SPDI:: NC_000008.11:64378644:G:A
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.64378645G>A, NC_000008.10:g.65291202G>A, NR_034102.2:n.921G>A, NR_034102.1:n.921G>A, NR_034103.2:n.742G>A, NR_034103.1:n.742G>A, NR_109793.1:n.783G>A

Select item 14898187652.

rs1489818765 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:64378116 (GRCh38)
8:65290673 (GRCh37)
Canonical SPDI:: NC_000008.11:64378115:G:A
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.0001/1 (ALFA)
HGVS:: NC_000008.11:g.64378116G>A, NC_000008.10:g.65290673G>A, NR_034102.2:n.392G>A, NR_034102.1:n.392G>A, NR_034103.2:n.213G>A, NR_034103.1:n.213G>A, NR_109792.1:n.282G>A, NR_109793.1:n.254G>A

Select item 14891076713.

rs1489107671 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:64378250 (GRCh38)
8:65290807 (GRCh37)
Canonical SPDI:: NC_000008.11:64378249:C:T
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000008.11:g.64378250C>T, NC_000008.10:g.65290807C>T, NR_034102.2:n.526C>T, NR_034102.1:n.526C>T, NR_034103.2:n.347C>T, NR_034103.1:n.347C>T, NR_109792.1:n.416C>T, NR_109793.1:n.388C>T

Select item 14890485884.

rs1489048588 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:64377292 (GRCh38)
8:65289849 (GRCh37)
Canonical SPDI:: NC_000008.11:64377291:G:A
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.64377292G>A, NC_000008.10:g.65289849G>A

Select item 14883005195.

rs1488300519 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 8:64377350 (GRCh38)
8:65289908 (GRCh37)
Canonical SPDI:: NC_000008.11:64377350:CC:CCC
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCC=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.64377352dup, NC_000008.10:g.65289909dup, NR_034103.2:n.26dup, NR_034103.1:n.26dup, NR_109793.1:n.20dup

Select item 14878250856.

rs1487825085 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 8:64378039 (GRCh38)
8:65290596 (GRCh37)
Canonical SPDI:: NC_000008.11:64378038:G:T
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
HGVS:: NC_000008.11:g.64378039G>T, NC_000008.10:g.65290596G>T

Select item 14857796997.

rs1485779699 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:64378821 (GRCh38)
8:65291378 (GRCh37)
Canonical SPDI:: NC_000008.11:64378820:C:T
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000021/3 (GnomAD)
T=0.000023/6 (TOPMED)
HGVS:: NC_000008.11:g.64378821C>T, NC_000008.10:g.65291378C>T, NR_034102.2:n.1097C>T, NR_034102.1:n.1097C>T, NR_034103.2:n.918C>T, NR_034103.1:n.918C>T, NR_109793.1:n.959C>T

Select item 14833751158.

rs1483375115 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:64377566 (GRCh38)
8:65290123 (GRCh37)
Canonical SPDI:: NC_000008.11:64377565:C:T
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000039/5 (GnomAD_exomes)
HGVS:: NC_000008.11:g.64377566C>T, NC_000008.10:g.65290123C>T

Select item 14822939719.

rs1482293971 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:64377892 (GRCh38)
8:65290449 (GRCh37)
Canonical SPDI:: NC_000008.11:64377891:G:A
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.64377892G>A, NC_000008.10:g.65290449G>A

Select item 148161745510.

rs1481617455 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:64379687 (GRCh38)
8:65292244 (GRCh37)
Canonical SPDI:: NC_000008.11:64379686:A:G
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,genic_downstream_transcript_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.64379687A>G, NC_000008.10:g.65292244A>G

Select item 148135746211.

rs1481357462 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 8:64378560 (GRCh38)
8:65291117 (GRCh37)
Canonical SPDI:: NC_000008.11:64378559:A:C
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.64378560A>C, NC_000008.10:g.65291117A>C, NR_034102.2:n.836A>C, NR_034102.1:n.836A>C, NR_034103.2:n.657A>C, NR_034103.1:n.657A>C, NR_109793.1:n.698A>C

Select item 148008496512.

rs1480084965 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 8:64378743 (GRCh38)
8:65291300 (GRCh37)
Canonical SPDI:: NC_000008.11:64378742:A:C
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000008.11:g.64378743A>C, NC_000008.10:g.65291300A>C, NR_034102.2:n.1019A>C, NR_034102.1:n.1019A>C, NR_034103.2:n.840A>C, NR_034103.1:n.840A>C, NR_109793.1:n.881A>C

Select item 147986041813.

rs1479860418 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:64378083 (GRCh38)
8:65290640 (GRCh37)
Canonical SPDI:: NC_000008.11:64378082:A:G
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.64378083A>G, NC_000008.10:g.65290640A>G, NR_034102.2:n.359A>G, NR_034102.1:n.359A>G, NR_034103.2:n.180A>G, NR_034103.1:n.180A>G, NR_109792.1:n.249A>G, NR_109793.1:n.221A>G

Select item 147942576814.

rs1479425768 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:64378060 (GRCh38)
8:65290617 (GRCh37)
Canonical SPDI:: NC_000008.11:64378059:G:A
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
HGVS:: NC_000008.11:g.64378060G>A, NC_000008.10:g.65290617G>A, NR_034102.2:n.336G>A, NR_034102.1:n.336G>A, NR_034103.2:n.157G>A, NR_034103.1:n.157G>A, NR_109792.1:n.226G>A, NR_109793.1:n.198G>A

Select item 147909704315.

rs1479097043 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 8:64379237 (GRCh38)
8:65291794 (GRCh37)
Canonical SPDI:: NC_000008.11:64379236:G:T
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.64379237G>T, NC_000008.10:g.65291794G>T, NR_029669.1:n.89G>T

Select item 147846328516.

rs1478463285 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:64377705 (GRCh38)
8:65290262 (GRCh37)
Canonical SPDI:: NC_000008.11:64377704:G:A
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000008.11:g.64377705G>A, NC_000008.10:g.65290262G>A

Select item 147812647017.

rs1478126470 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 8:64378087 (GRCh38)
8:65290644 (GRCh37)
Canonical SPDI:: NC_000008.11:64378086:C:A
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000008.11:g.64378087C>A, NC_000008.10:g.65290644C>A, NR_034102.2:n.363C>A, NR_034102.1:n.363C>A, NR_034103.2:n.184C>A, NR_034103.1:n.184C>A, NR_109792.1:n.253C>A, NR_109793.1:n.225C>A

Select item 147802615618.

rs1478026156 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 8:64378953 (GRCh38)
8:65291510 (GRCh37)
Canonical SPDI:: NC_000008.11:64378952:A:G,NC_000008.11:64378952:A:T
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000066/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000223/1 (Estonian)
HGVS:: NC_000008.11:g.64378953A>G, NC_000008.11:g.64378953A>T, NC_000008.10:g.65291510A>G, NC_000008.10:g.65291510A>T

Select item 147765777519.

rs1477657775 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:64377912 (GRCh38)
8:65290469 (GRCh37)
Canonical SPDI:: NC_000008.11:64377911:G:A
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.64377912G>A, NC_000008.10:g.65290469G>A

Select item 147469507420.

rs1474695074 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 8:64377802 (GRCh38)
8:65290359 (GRCh37)
Canonical SPDI:: NC_000008.11:64377801:T:G
Gene:: MIR124-2 (Varview), MIR124-2HG (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.64377802T>G, NC_000008.10:g.65290359T>G

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