SNP Links for Gene (Select 406920) - SNP

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Links from Gene

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Select item 14895028631.

rs1489502863 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 22:21653189 (GRCh38)
22:22007478 (GRCh37)
Canonical SPDI:: NC_000022.11:21653188:G:T
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: intron_variant,500B_downstream_variant,downstream_transcript_variant,upstream_transcript_variant,genic_upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00003/8 (TOPMED)
T=0.000036/5 (GnomAD)
HGVS:: NC_000022.11:g.21653189G>T, NC_000022.10:g.22007478G>T

Select item 14890249352.

rs1489024935 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21651449 (GRCh38)
22:22005738 (GRCh37)
Canonical SPDI:: NC_000022.11:21651448:C:T
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000672/11 (TOMMO)
T=0.001092/2 (Korea1K)
T=0.004107/12 (KOREAN)
C=0.5/2 (SGDP_PRJ)
HGVS:: NC_000022.11:g.21651449C>T, NC_000022.10:g.22005738C>T

Select item 14865327853.

rs1486532785 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 22:21653380 (GRCh38)
22:22007669 (GRCh37)
Canonical SPDI:: NC_000022.11:21653379:C:G
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: non_coding_transcript_variant,downstream_transcript_variant,genic_upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000022.11:g.21653380C>G, NC_000022.10:g.22007669C>G, NR_169730.1:n.190C>G, NR_169729.1:n.190C>G, NR_169731.1:n.190C>G, NR_029845.1:n.77C>G

Select item 14834521514.

rs1483452151 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 22:21651501 (GRCh38)
22:22005790 (GRCh37)
Canonical SPDI:: NC_000022.11:21651500:G:A,NC_000022.11:21651500:G:C,NC_000022.11:21651500:G:T
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
T=0.000035/1 (TOMMO)
C=0.000684/2 (KOREAN)
HGVS:: NC_000022.11:g.21651501G>A, NC_000022.11:g.21651501G>C, NC_000022.11:g.21651501G>T, NC_000022.10:g.22005790G>A, NC_000022.10:g.22005790G>C, NC_000022.10:g.22005790G>T

Select item 14833401095.

rs1483340109 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 22:21651722 (GRCh38)
22:22006012 (GRCh37)
Canonical SPDI:: NC_000022.11:21651722:CCC:CCCC
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCC=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21651725dup, NC_000022.10:g.22006014dup

Select item 14829733436.

rs1482973343 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:21652107 (GRCh38)
22:22006396 (GRCh37)
Canonical SPDI:: NC_000022.11:21652106:G:A
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21652107G>A, NC_000022.10:g.22006396G>A

Select item 14829589487.

rs1482958948 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 22:21652975 (GRCh38)
22:22007264 (GRCh37)
Canonical SPDI:: NC_000022.11:21652974:C:A
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
HGVS:: NC_000022.11:g.21652975C>A, NC_000022.10:g.22007264C>A

Select item 14823506878.

rs1482350687 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 22:21652133 (GRCh38)
22:22006422 (GRCh37)
Canonical SPDI:: NC_000022.11:21652132:A:G
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21652133A>G, NC_000022.10:g.22006422A>G

Select item 14822795019.

rs1482279501 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21652943 (GRCh38)
22:22007232 (GRCh37)
Canonical SPDI:: NC_000022.11:21652942:C:T
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21652943C>T, NC_000022.10:g.22007232C>T

Select item 148180093610.

rs1481800936 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 22:21653099 (GRCh38)
22:22007388 (GRCh37)
Canonical SPDI:: NC_000022.11:21653098:C:A
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: intron_variant,500B_downstream_variant,downstream_transcript_variant,upstream_transcript_variant,genic_upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000022.11:g.21653099C>A, NC_000022.10:g.22007388C>A

Select item 148110279611.

rs1481102796 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 22:21652843 (GRCh38)
22:22007132 (GRCh37)
Canonical SPDI:: NC_000022.11:21652842:T:C
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000142/2 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000022.11:g.21652843T>C, NC_000022.10:g.22007132T>C

Select item 147614026812.

rs1476140268 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 22:21653563 (GRCh38)
22:22007852 (GRCh37)
Canonical SPDI:: NC_000022.11:21653562:T:C
Gene:: MIR130B (Varview), LOC107985532 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000022.11:g.21653563T>C, NC_000022.10:g.22007852T>C

Select item 147530559013.

rs1475305590 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 22:21653621 (GRCh38)
22:22007910 (GRCh37)
Canonical SPDI:: NC_000022.11:21653620:C:G
Gene:: MIR130B (Varview), LOC107985532 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21653621C>G, NC_000022.10:g.22007910C>G

Select item 147391601214.

rs1473916012 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 22:21653361 (GRCh38)
22:22007650 (GRCh37)
Canonical SPDI:: NC_000022.11:21653360:A:G
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: non_coding_transcript_variant,downstream_transcript_variant,genic_upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000022.11:g.21653361A>G, NC_000022.10:g.22007650A>G, NR_169730.1:n.171A>G, NR_169729.1:n.171A>G, NR_169731.1:n.171A>G, NR_029845.1:n.58A>G

Select item 147370953115.

rs1473709531 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 22:21653308 (GRCh38)
22:22007597 (GRCh37)
Canonical SPDI:: NC_000022.11:21653307:T:C
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: intron_variant,500B_downstream_variant,downstream_transcript_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: C=0.000004/1 (GnomAD_exomes)
C=0.002193/4 (Korea1K)
HGVS:: NC_000022.11:g.21653308T>C, NC_000022.10:g.22007597T>C, NR_029845.1:n.5T>C

Select item 147339029416.

rs1473390294 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21651535 (GRCh38)
22:22005824 (GRCh37)
Canonical SPDI:: NC_000022.11:21651534:C:T
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.00007/1 (ALFA)
HGVS:: NC_000022.11:g.21651535C>T, NC_000022.10:g.22005824C>T

Select item 147290682417.

rs1472906824 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:21651800 (GRCh38)
22:22006089 (GRCh37)
Canonical SPDI:: NC_000022.11:21651799:G:A
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000022.11:g.21651800G>A, NC_000022.10:g.22006089G>A

Select item 147264409718.

rs1472644097 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:21651888 (GRCh38)
22:22006177 (GRCh37)
Canonical SPDI:: NC_000022.11:21651887:G:A
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.21651888G>A, NC_000022.10:g.22006177G>A

Select item 147236473419.

rs1472364734 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:21653265 (GRCh38)
22:22007554 (GRCh37)
Canonical SPDI:: NC_000022.11:21653264:C:T
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: intron_variant,500B_downstream_variant,downstream_transcript_variant,upstream_transcript_variant,genic_upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000022.11:g.21653265C>T, NC_000022.10:g.22007554C>T

Select item 147191888220.

rs1471918882 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 22:21652175 (GRCh38)
22:22006464 (GRCh37)
Canonical SPDI:: NC_000022.11:21652174:C:G
Gene:: MIR130B (Varview), MIR301B (Varview), LOC107985532 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000022.11:g.21652175C>G, NC_000022.10:g.22006464C>G

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